##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062811_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1971041 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.200918702350688 32.0 32.0 32.0 32.0 32.0 2 31.268527646050995 32.0 32.0 32.0 32.0 32.0 3 31.368583910735495 32.0 32.0 32.0 32.0 32.0 4 31.470016605438445 32.0 32.0 32.0 32.0 32.0 5 31.38710407343125 32.0 32.0 32.0 32.0 32.0 6 34.924364333364956 36.0 36.0 36.0 36.0 36.0 7 34.95099797518164 36.0 36.0 36.0 36.0 36.0 8 34.880322631543436 36.0 36.0 36.0 32.0 36.0 9 35.00002130853696 36.0 36.0 36.0 36.0 36.0 10 34.84229501060607 36.0 36.0 36.0 32.0 36.0 11 35.02383004716797 36.0 36.0 36.0 36.0 36.0 12 34.9125538230813 36.0 36.0 36.0 32.0 36.0 13 34.973498268174026 36.0 36.0 36.0 36.0 36.0 14 34.92320606217729 36.0 36.0 36.0 32.0 36.0 15 34.887716693868875 36.0 36.0 36.0 32.0 36.0 16 34.89586822394867 36.0 36.0 36.0 32.0 36.0 17 34.86044125921277 36.0 36.0 36.0 32.0 36.0 18 34.87262213216265 36.0 36.0 36.0 32.0 36.0 19 34.859578263465856 36.0 36.0 36.0 32.0 36.0 20 34.84673378179348 36.0 36.0 36.0 32.0 36.0 21 34.84236553171649 36.0 36.0 36.0 32.0 36.0 22 34.82535066495319 36.0 36.0 36.0 32.0 36.0 23 34.77368050689965 36.0 36.0 36.0 32.0 36.0 24 34.742731379002265 36.0 36.0 36.0 32.0 36.0 25 34.72101138433955 36.0 36.0 36.0 32.0 36.0 26 34.66140125953747 36.0 36.0 36.0 32.0 36.0 27 34.64552234073264 36.0 36.0 36.0 32.0 36.0 28 34.61764012011927 36.0 36.0 36.0 32.0 36.0 29 34.57952371361123 36.0 36.0 36.0 32.0 36.0 30 34.560373934382895 36.0 36.0 36.0 32.0 36.0 31 34.55940591798953 36.0 36.0 36.0 32.0 36.0 32 34.53261398418399 36.0 36.0 36.0 32.0 36.0 33 34.49727529767265 36.0 36.0 36.0 32.0 36.0 34 34.4949019325321 36.0 36.0 36.0 32.0 36.0 35 34.46354692774021 36.0 36.0 36.0 32.0 36.0 36 34.435949835645225 36.0 36.0 36.0 32.0 36.0 37 34.44086348279919 36.0 36.0 36.0 32.0 36.0 38 33.9995352709558 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 6.0 21 37.0 22 157.0 23 489.0 24 1352.0 25 3203.0 26 6532.0 27 12915.0 28 22534.0 29 35265.0 30 53199.0 31 77759.0 32 113504.0 33 183593.0 34 453142.0 35 1007352.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.35091093872328 18.14758795441019 11.907529584515336 26.593971522351197 2 16.171200903481967 19.914146889892194 36.43222033433094 27.482431872294892 3 18.294698080861842 23.502200106441215 28.415999464242496 29.787102348454447 4 12.106380657877713 15.452338492213483 35.67100533476067 36.77027551514813 5 14.351720082656913 36.69546873501742 33.13952691955867 15.813284262766997 6 35.46506967394845 35.40591302653729 15.833890569334534 13.295126730179732 7 30.969645312349382 30.129424717026122 20.14058639391587 18.760343576708625 8 28.73360801498116 32.848150363595494 18.626551172521282 19.79169044890206 9 27.10805046048439 13.970444979319808 18.213030348539398 40.7084742116564 10 15.831549147142088 26.40130490811864 31.043672819149474 26.7234731255898 11 38.60072290672636 20.879005465434627 21.402920039859318 19.117351587979698 12 24.80837488508581 23.505151605551596 28.091572147845095 23.594901361517493 13 29.484297368037872 18.795011159089192 25.22583266997761 26.494858802895326 14 23.444311914364032 19.468392590514352 24.52526355362471 32.562031941496905 15 25.329102743169724 27.202934895824082 21.727655589102408 25.740306771903782 16 26.30726605889984 25.727217242056355 23.105607645908936 24.859909053134864 17 24.34677918927105 25.996719500000253 24.604916894169122 25.051584416559574 18 25.523923652526758 24.4577357853033 25.700277163184325 24.31806339898561 19 25.692819175248005 24.829569755271454 25.006481346658948 24.471129722821594 20 25.9899717966293 23.956021209097123 24.660268355655717 25.39373863861787 21 27.17465255634211 24.03113281878238 24.087448295036275 24.706766329839237 22 25.936662878480398 24.087080931893823 24.86474145628704 25.111514733338748 23 24.29846608741181 23.727853039870364 25.56708698665373 26.406593886064094 24 24.846210707945698 24.887153539677765 25.00176302776046 25.264872724616076 25 25.048692543686307 24.34206087037256 25.107950570282405 25.50129601565873 26 24.80912370671133 25.29845903763544 25.325602054954715 24.566815200698514 27 25.719886821113132 24.358878743647384 24.637513514445935 25.283720920793552 28 24.6156218972614 24.468491523007387 25.62904576820066 25.28684081153056 29 24.498729351647174 24.783147585463723 25.487597670469565 25.23052539241954 30 24.466360669311292 24.901460700208673 25.788250980065865 24.843927650414173 31 25.2857246500707 24.730586527626773 24.481479583631188 25.50220923867134 32 25.082989141271035 24.533888437632704 24.51364532751982 25.86947709357644 33 24.479906810665025 24.129584316105042 25.32210136673971 26.068407506490228 34 25.466999418074003 24.426838406709958 25.290392234357377 24.81576994085866 35 26.012700902720947 24.300001877180637 25.274410831636686 24.412886388461732 36 24.602025021295855 25.143769206221485 24.817647121495696 25.436558650986967 37 25.89925831070992 24.71769993622659 24.65098392169417 24.73205783136931 38 24.782335831674736 24.329022075136944 25.317890393959335 25.57075169922899 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 28.0 1 44.0 2 60.0 3 60.0 4 275.5 5 491.0 6 491.0 7 686.0 8 881.0 9 977.0 10 1073.0 11 1073.0 12 1459.0 13 1845.0 14 2660.0 15 3475.0 16 3475.0 17 5204.5 18 6934.0 19 6934.0 20 8646.5 21 10359.0 22 11837.5 23 13316.0 24 13316.0 25 16014.0 26 18712.0 27 18712.0 28 23709.0 29 28706.0 30 34757.5 31 40809.0 32 40809.0 33 52644.5 34 64480.0 35 64480.0 36 72933.5 37 81387.0 38 93360.0 39 105333.0 40 105333.0 41 112683.0 42 120033.0 43 136376.0 44 152719.0 45 152719.0 46 155971.0 47 159223.0 48 159223.0 49 171156.0 50 183089.0 51 186511.0 52 189933.0 53 189933.0 54 181476.0 55 173019.0 56 173019.0 57 167331.5 58 161644.0 59 145490.0 60 129336.0 61 129336.0 62 122803.0 63 116270.0 64 96579.5 65 76889.0 66 76889.0 67 64611.5 68 52334.0 69 52334.0 70 42001.0 71 31668.0 72 24749.5 73 17831.0 74 17831.0 75 13440.5 76 9050.0 77 9050.0 78 8880.5 79 8711.0 80 6776.5 81 4842.0 82 4842.0 83 4541.5 84 4241.0 85 4241.0 86 2756.5 87 1272.0 88 1031.0 89 790.0 90 790.0 91 473.0 92 156.0 93 105.0 94 54.0 95 54.0 96 43.0 97 32.0 98 32.0 99 24.0 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008219007113499922 2 0.0 3 0.0 4 3.044076708703675E-4 5 1.0146922362345583E-4 6 1.5220383543518374E-4 7 5.580807299290071E-4 8 0.0016235075779752932 9 0.0037036266622561377 10 0.0010654268480462864 11 0.005530072687478343 12 2.536730590586396E-4 13 1.0146922362345583E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 1.0146922362345583E-4 22 5.073461181172791E-5 23 1.5220383543518374E-4 24 0.0 25 0.0 26 0.0 27 1.0146922362345583E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1971041.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.89840608154098 #Duplication Level Percentage of deduplicated Percentage of total 1 77.05480006640842 38.449117042455974 2 13.874215265952166 13.846024548063927 3 4.069778222990762 6.092263392978159 4 1.655694965431633 3.3046615892908235 5 0.8981209234018966 2.24074012731182 6 0.523386902215983 1.5669703310719745 7 0.3312047947006166 1.1568613939487347 8 0.24507836555981263 0.9783215845203104 9 0.18220352799547673 0.8182499066466947 >10 0.9850590871154292 8.88255862865696 >50 0.07805838230430648 2.7154249266382506 >100 0.08054591387984368 8.694502636561781 >500 0.014056059812078664 4.819674801510537 >1k 0.0077975222315180915 6.434629090344012 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4103 0.20816411226351964 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 3603 0.18279680635765566 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 3258 0.16529336528260954 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2769 0.1404841401066746 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2762 0.14012899782399252 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2756 0.13982459015312215 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2733 0.1386576940814524 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 2606 0.13221439838136295 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2606 0.13221439838136295 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2534 0.12856150633091853 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2399 0.12171233373633526 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 2273 0.11531977264805755 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2178 0.1104999845259434 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2159 0.10953602690152056 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2153 0.1092316192306502 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 2011 0.10202730435338483 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 2008 0.10187510051794967 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.536730590586396E-4 2 0.0 0.0 0.0 0.0 2.536730590586396E-4 3 0.0 0.0 0.0 0.0 2.536730590586396E-4 4 0.0 0.0 0.0 0.0 2.536730590586396E-4 5 0.0 0.0 0.0 0.0 3.551422826820954E-4 6 0.0 0.0 0.0 0.0 3.551422826820954E-4 7 0.0 0.0 0.0 5.073461181172791E-5 3.551422826820954E-4 8 0.0 0.0 0.0 5.073461181172791E-5 3.551422826820954E-4 9 0.0 0.0 0.0 1.5220383543518374E-4 3.551422826820954E-4 10 0.0 0.0 0.0 1.5220383543518374E-4 3.551422826820954E-4 11 0.0 0.0 0.0 1.5220383543518374E-4 3.551422826820954E-4 12 0.0 0.0 0.0 1.5220383543518374E-4 7.610191771759187E-4 13 0.0 0.0 0.0 2.0293844724691165E-4 7.610191771759187E-4 14 0.0 0.0 0.0 2.0293844724691165E-4 8.117537889876466E-4 15 0.0 0.0 0.0 2.0293844724691165E-4 0.001166896071669742 16 0.0 0.0 0.0 2.0293844724691165E-4 0.001268365295293198 17 0.0 0.0 0.0 2.536730590586396E-4 0.001268365295293198 18 0.0 0.0 0.0 3.044076708703675E-4 0.001268365295293198 19 0.0 0.0 0.0 3.551422826820954E-4 0.001268365295293198 20 0.0 0.0 0.0 4.5661150630555125E-4 0.0013190999071049257 21 0.0 0.0 0.0 6.595499535524628E-4 0.0013190999071049257 22 0.0 0.0 0.0 8.117537889876466E-4 0.0013190999071049257 23 0.0 0.0 0.0 0.001166896071669742 0.0013190999071049257 24 0.0 0.0 0.0 0.0016742421897870212 0.0013190999071049257 25 0.0 0.0 0.0 0.0020801190842808445 0.0013190999071049257 26 0.0 0.0 0.0 0.0024859959787746676 0.0014205691307283817 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGCGG 580 0.0 21.240875 29 TCTAGCG 620 0.0 20.128553 28 TAGCGGC 645 0.0 19.10032 30 ACGTCGT 45 0.008853667 17.777355 23 AAGACGG 820 0.0 17.561893 5 CAAGACG 795 0.0 17.10738 4 AGCGGCG 725 0.0 16.772015 31 CGCAAGA 820 0.0 16.58497 2 ATCGTTT 485 0.0 16.494452 29 CGCCGGT 735 0.0 16.3278 7 GCGCAAG 840 0.0 16.190912 1 CGGTCCA 790 0.0 16.000837 10 ATAACGA 330 0.0 16.000027 12 TAAACGC 450 0.0 15.999619 28 GACGGAC 815 0.0 15.903076 7 ACGGACC 840 0.0 15.810752 8 TAACGAA 330 0.0 15.514782 13 CGCTTCG 480 0.0 15.332969 32 CGGACCA 860 0.0 15.257 9 GTATCAA 3320 0.0 15.229327 1 >>END_MODULE