##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062809_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1600052 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.156723031501475 32.0 32.0 32.0 32.0 32.0 2 31.211294382932554 32.0 32.0 32.0 32.0 32.0 3 31.325118183659033 32.0 32.0 32.0 32.0 32.0 4 31.438914485279227 32.0 32.0 32.0 32.0 32.0 5 31.330976118276155 32.0 32.0 32.0 32.0 32.0 6 34.864795644141566 36.0 36.0 36.0 32.0 36.0 7 34.89785331976711 36.0 36.0 36.0 36.0 36.0 8 34.81541912387847 36.0 36.0 36.0 32.0 36.0 9 34.95111658871087 36.0 36.0 36.0 32.0 36.0 10 34.78002902405672 36.0 36.0 36.0 32.0 36.0 11 34.96780417136443 36.0 36.0 36.0 36.0 36.0 12 34.85532720186594 36.0 36.0 36.0 32.0 36.0 13 34.92495618892386 36.0 36.0 36.0 32.0 36.0 14 34.86247009472192 36.0 36.0 36.0 32.0 36.0 15 34.837175291803014 36.0 36.0 36.0 32.0 36.0 16 34.84158827338111 36.0 36.0 36.0 32.0 36.0 17 34.80718939134478 36.0 36.0 36.0 32.0 36.0 18 34.81090052073308 36.0 36.0 36.0 32.0 36.0 19 34.80855497196341 36.0 36.0 36.0 32.0 36.0 20 34.789611837615276 36.0 36.0 36.0 32.0 36.0 21 34.78654568726516 36.0 36.0 36.0 32.0 36.0 22 34.766948199183524 36.0 36.0 36.0 32.0 36.0 23 34.70695014912015 36.0 36.0 36.0 32.0 36.0 24 34.68086974673323 36.0 36.0 36.0 32.0 36.0 25 34.65776924749946 36.0 36.0 36.0 32.0 36.0 26 34.59155952431546 36.0 36.0 36.0 32.0 36.0 27 34.57443570583956 36.0 36.0 36.0 32.0 36.0 28 34.54913527810346 36.0 36.0 36.0 32.0 36.0 29 34.506044178564196 36.0 36.0 36.0 32.0 36.0 30 34.487323536985045 36.0 36.0 36.0 32.0 36.0 31 34.48300617729924 36.0 36.0 36.0 32.0 36.0 32 34.46040816173474 36.0 36.0 36.0 32.0 36.0 33 34.42668738266006 36.0 36.0 36.0 32.0 36.0 34 34.4184351508576 36.0 36.0 36.0 32.0 36.0 35 34.38357878368953 36.0 36.0 36.0 32.0 36.0 36 34.34966301095214 36.0 36.0 36.0 32.0 36.0 37 34.34656373667856 36.0 36.0 36.0 32.0 36.0 38 33.89101666695832 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 7.0 21 24.0 22 117.0 23 364.0 24 1157.0 25 2712.0 26 5678.0 27 10993.0 28 19195.0 29 30197.0 30 46363.0 31 67341.0 32 97748.0 33 157873.0 34 379364.0 35 780919.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.21146303732987 18.15941372251824 12.03412659968436 26.59499664046752 2 15.973803335018696 20.06192302620354 36.42227653993529 27.541997098842476 3 18.257844120066096 23.714729271298683 28.291455527695348 29.735971080939873 4 12.076497609449705 15.515702634292678 35.55638886284804 36.85141089340958 5 14.45196781104614 36.57899868254282 32.95955381450103 16.009479691910013 6 35.51024311100084 35.26893830259161 15.796059000619355 13.424759585788204 7 31.020502548365826 30.04034261536394 20.14424594308285 18.79490889318738 8 28.71678462411532 32.82631630262773 18.592485556358326 19.864413516898622 9 27.317221952428362 13.88967535361225 18.085959448420518 40.707143245538866 10 15.843706016614625 26.383593869137943 30.983865363029334 26.7888347512181 11 38.6041601692018 20.771220694219878 21.355226899285803 19.26939223729252 12 24.941767335584515 23.46506071384153 27.913805031977184 23.679366918596767 13 29.655459905527714 18.751648390108784 25.0682792869705 26.524612417393 14 23.665980855622195 19.350933594658173 24.468767265063885 32.514318284655744 15 25.431673470612203 26.92143755327952 21.787104419106377 25.8597845570019 16 26.37055092028374 25.461266835411394 22.948595356395113 25.21958688790975 17 24.411394129690787 25.81241109663936 24.5761387754898 25.20005599818006 18 25.658041113663803 24.116466214848018 25.78384952489044 24.441643146597734 19 25.905783062050485 24.772257401634448 24.841630147020222 24.480329389294848 20 26.10008924709947 23.75741538400002 24.670385712464345 25.472109656436164 21 27.25166541774658 23.856581892179552 24.049950970251537 24.84180171982233 22 26.12680853723321 23.909627824130496 24.699478141308084 25.26408549732821 23 24.38669065759861 23.55102874974454 25.491406825665962 26.57087376699089 24 25.06549787131918 24.71032191453778 24.848317429683537 25.375862784459507 25 25.196884349311365 24.116606283174725 24.99451579980888 25.69199356770503 26 25.038373752853033 25.087372160404787 25.26574136340569 24.608512723336492 27 25.752866627376253 24.266539004069244 24.506968840368213 25.47362552818629 28 24.797444083067298 24.13696554861967 25.562606715281756 25.502983653031276 29 24.691510025924156 24.534827618102412 25.4019869354246 25.371675420548833 30 24.681197861069514 24.633324416956448 25.6462914955264 25.03918622644764 31 25.37892518493149 24.437830770499957 24.437080794874166 25.746163249694387 32 25.076247521955537 24.46382992552742 24.396519613112574 26.06340293940447 33 24.595388149885128 24.08034238887236 25.14687022671763 26.177399234524877 34 25.533795151657575 24.257586628434577 25.182681562849208 25.025936657058644 35 26.102526667883293 24.129528290330565 25.106059053080777 24.661885988705368 36 24.71950911595373 24.91894013444563 24.768195033661407 25.593355715939232 37 26.056590660803526 24.55526445390525 24.583076050028374 24.80506883526285 38 24.936970719665013 24.214493297084466 25.06196681353708 25.786569169713445 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 33.0 1 48.0 2 63.0 3 63.0 4 294.0 5 525.0 6 525.0 7 712.0 8 899.0 9 948.0 10 997.0 11 997.0 12 1317.5 13 1638.0 14 2350.5 15 3063.0 16 3063.0 17 4587.5 18 6112.0 19 6112.0 20 7442.0 21 8772.0 22 9449.5 23 10127.0 24 10127.0 25 11757.0 26 13387.0 27 13387.0 28 17354.0 29 21321.0 30 26183.0 31 31045.0 32 31045.0 33 40211.0 34 49377.0 35 49377.0 36 56305.0 37 63233.0 38 72934.5 39 82636.0 40 82636.0 41 88560.5 42 94485.0 43 108117.5 44 121750.0 45 121750.0 46 126330.5 47 130911.0 48 130911.0 49 140037.5 50 149164.0 51 151893.0 52 154622.0 53 154622.0 54 149630.5 55 144639.0 56 144639.0 57 140262.0 58 135885.0 59 122924.5 60 109964.0 61 109964.0 62 103364.0 63 96764.0 64 80398.0 65 64032.0 66 64032.0 67 53431.5 68 42831.0 69 42831.0 70 34056.5 71 25282.0 72 19641.0 73 14000.0 74 14000.0 75 10516.0 76 7032.0 77 7032.0 78 6908.0 79 6784.0 80 5277.0 81 3770.0 82 3770.0 83 3509.5 84 3249.0 85 3249.0 86 2058.0 87 867.0 88 724.5 89 582.0 90 582.0 91 351.5 92 121.0 93 85.0 94 49.0 95 49.0 96 33.5 97 18.0 98 18.0 99 20.5 100 23.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007937242039633712 2 6.249796881601348E-5 3 0.0 4 1.2499593763202696E-4 5 0.0 6 6.249796881601348E-5 7 4.3748578171209435E-4 8 0.002499918752640539 9 0.004062367973040876 10 9.999675010562157E-4 11 0.00431235984830493 12 3.124898440800674E-4 13 3.7498781289608087E-4 14 0.0 15 0.0 16 1.2499593763202696E-4 17 0.0 18 0.0 19 0.0 20 0.0 21 1.8749390644804044E-4 22 1.2499593763202696E-4 23 1.8749390644804044E-4 24 0.0 25 6.249796881601348E-5 26 0.0 27 6.249796881601348E-5 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 1.2499593763202696E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1600052.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.80004646988556 #Duplication Level Percentage of deduplicated Percentage of total 1 75.51055067386272 36.84918381851149 2 14.147119940190134 13.807602209926461 3 4.515525033102289 6.610734943539696 4 1.902176137501706 3.713051356159627 5 1.0454412097522487 2.5508789808721555 6 0.6307465693531301 1.8468277137092186 7 0.4172742627670303 1.425410238960282 8 0.30625596121191745 1.195624411105683 9 0.22008492366917082 0.9666139052139077 >10 1.1083745407700845 9.63761476878591 >50 0.0896507548101767 3.0517346430777277 >100 0.08745230456010704 9.294871815611975 >500 0.01341439732486928 4.549757218172338 >1k 0.005933291124461412 4.500093976353655 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3921 0.24505453572758887 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2688 0.16799454017744422 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2588 0.16174474329584287 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2366 0.14787019421868788 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2248 0.1404954338983983 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2077 0.12980828123086 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2040 0.12749585638466748 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2031 0.12693337466532337 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2012 0.12574591325781914 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1886 0.11787116918700143 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1835 0.11468377277738474 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1730 0.10812148605170331 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1654 0.1033716404216863 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1649 0.10305915057760623 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1646 0.10287165667115818 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1614 0.10087172166904576 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 6.249796881601348E-5 6.249796881601348E-5 6 0.0 0.0 0.0 6.249796881601348E-5 6.249796881601348E-5 7 0.0 0.0 0.0 6.249796881601348E-5 6.249796881601348E-5 8 0.0 0.0 0.0 6.249796881601348E-5 6.249796881601348E-5 9 0.0 0.0 0.0 1.2499593763202696E-4 6.249796881601348E-5 10 0.0 0.0 0.0 1.2499593763202696E-4 6.249796881601348E-5 11 0.0 0.0 0.0 1.2499593763202696E-4 6.249796881601348E-5 12 0.0 0.0 0.0 1.8749390644804044E-4 3.124898440800674E-4 13 0.0 0.0 0.0 1.8749390644804044E-4 3.7498781289608087E-4 14 0.0 0.0 0.0 1.8749390644804044E-4 3.7498781289608087E-4 15 0.0 0.0 0.0 1.8749390644804044E-4 5.624817193441214E-4 16 0.0 0.0 0.0 3.124898440800674E-4 5.624817193441214E-4 17 0.0 0.0 0.0 3.124898440800674E-4 5.624817193441214E-4 18 0.0 0.0 0.0 3.7498781289608087E-4 6.249796881601348E-4 19 0.0 0.0 0.0 3.7498781289608087E-4 6.249796881601348E-4 20 0.0 0.0 0.0 3.7498781289608087E-4 8.124735946081753E-4 21 0.0 0.0 0.0 8.124735946081753E-4 9.374695322402022E-4 22 0.0 0.0 0.0 0.0011249634386882427 9.374695322402022E-4 23 0.0 0.0 0.0 0.00143745328276831 9.374695322402022E-4 24 0.0 0.0 0.0 0.0019999350021124313 9.374695322402022E-4 25 0.0 0.0 0.0 0.002499918752640539 9.374695322402022E-4 26 0.0 0.0 0.0 0.003249894378432701 9.999675010562157E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 500 0.0 20.159252 28 CTAGCGG 515 0.0 19.261421 29 TAGCGGC 520 0.0 19.076216 30 ACCGTCG 475 0.0 18.19164 8 GTATTAT 115 9.422365E-10 18.08798 1 TACCGTC 515 0.0 17.710848 7 ATACCGT 510 0.0 17.256958 6 TCGCGTA 270 0.0 17.186157 9 GTATTAG 265 0.0 16.906616 1 GCGTAAC 275 0.0 16.873156 11 CGTCGTA 530 0.0 16.604195 10 CGCGTAA 270 0.0 16.593014 10 AGCGGCG 630 0.0 16.507324 31 CCGTCGT 525 0.0 16.458076 9 GTCGTAG 525 0.0 16.15279 11 TCAGATA 535 0.0 16.149942 2 TCGTTTA 465 0.0 15.483295 30 ATCGTTT 455 0.0 15.471952 29 TTCGGAA 630 0.0 15.237531 31 TTTTCGG 630 0.0 15.237531 29 >>END_MODULE