##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062803_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1824559 Sequences flagged as poor quality 0 Sequence length 38 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.17969876556472 32.0 32.0 32.0 32.0 32.0 2 31.300375049532516 32.0 32.0 32.0 32.0 32.0 3 31.370024756667227 32.0 32.0 32.0 32.0 32.0 4 31.470458888969883 32.0 32.0 32.0 32.0 32.0 5 31.387781376212004 32.0 32.0 32.0 32.0 32.0 6 34.911039873196756 36.0 36.0 36.0 36.0 36.0 7 34.937229215388484 36.0 36.0 36.0 36.0 36.0 8 34.87942182193067 36.0 36.0 36.0 32.0 36.0 9 34.98238314025471 36.0 36.0 36.0 36.0 36.0 10 34.83179168226404 36.0 36.0 36.0 32.0 36.0 11 35.005479680295345 36.0 36.0 36.0 36.0 36.0 12 34.89245127178677 36.0 36.0 36.0 32.0 36.0 13 34.9511843683871 36.0 36.0 36.0 36.0 36.0 14 34.890103855232965 36.0 36.0 36.0 32.0 36.0 15 34.85809228421772 36.0 36.0 36.0 32.0 36.0 16 34.86638469898754 36.0 36.0 36.0 32.0 36.0 17 34.82569431846271 36.0 36.0 36.0 32.0 36.0 18 34.83149352802513 36.0 36.0 36.0 32.0 36.0 19 34.82421670113162 36.0 36.0 36.0 32.0 36.0 20 34.80537324361668 36.0 36.0 36.0 32.0 36.0 21 34.789077250995994 36.0 36.0 36.0 32.0 36.0 22 34.77740374523378 36.0 36.0 36.0 32.0 36.0 23 34.7110929271128 36.0 36.0 36.0 32.0 36.0 24 34.68648917354824 36.0 36.0 36.0 32.0 36.0 25 34.66754541782425 36.0 36.0 36.0 32.0 36.0 26 34.60096330126896 36.0 36.0 36.0 32.0 36.0 27 34.58671492673024 36.0 36.0 36.0 32.0 36.0 28 34.55080104288214 36.0 36.0 36.0 32.0 36.0 29 34.50641881134017 36.0 36.0 36.0 32.0 36.0 30 34.48749423833376 36.0 36.0 36.0 32.0 36.0 31 34.49040836717256 36.0 36.0 36.0 32.0 36.0 32 34.452470432581244 36.0 36.0 36.0 32.0 36.0 33 34.40696025724572 36.0 36.0 36.0 32.0 36.0 34 34.399311285631214 36.0 36.0 36.0 32.0 36.0 35 34.36080883106548 36.0 36.0 36.0 32.0 36.0 36 34.33028255046836 36.0 36.0 36.0 32.0 36.0 37 34.32072407633844 36.0 36.0 36.0 32.0 36.0 38 33.874651902185676 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 9.0 21 44.0 22 185.0 23 465.0 24 1316.0 25 3302.0 26 6756.0 27 13057.0 28 22725.0 29 35351.0 30 53237.0 31 75357.0 32 107423.0 33 170315.0 34 413171.0 35 921845.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.025400498680945 18.353410110539663 12.143960824659768 26.47722856611962 2 16.045630752417434 20.723857107388692 36.00727627881587 27.223235861378008 3 18.08338343676472 24.368189792711554 28.428348987344336 29.120077783179386 4 12.283762342050528 15.890998078983642 35.3938905650967 36.43134901386914 5 14.667497552831973 36.32233121665631 32.47520769413743 16.53496353637429 6 34.670042832361865 35.31524125060631 16.251140689099532 13.76357522793229 7 30.506573946137983 30.354481732766036 20.431930924375365 18.70701339672062 8 28.563113309305198 31.870379626950097 19.301868757289554 20.264638306455147 9 27.73317153407294 13.974588965750845 18.37709641580656 39.91514308436965 10 16.514966246268237 25.721456214419092 30.170470458565152 27.59310708074752 11 38.373448641206195 20.754156460388863 21.604111707151034 19.268283191253907 12 25.647939877843985 23.53098185198339 27.380200728726834 23.44087754144579 13 29.48331482652747 18.63732177836337 25.128003884784995 26.751359510324168 14 24.34127918033892 19.666505714531564 24.188255901837103 31.803959203292415 15 25.78014742192497 26.363192420743864 22.06423579615677 25.792424361174398 16 26.585123629942153 25.187415253447686 22.959916867537235 25.267544249072927 17 24.375314802097385 25.43787293258261 24.60972761089118 25.577084654428823 18 25.899737964077897 23.651468656261596 25.92615530656997 24.522638073090537 19 26.1325065399365 24.41587254783211 24.98318771823767 24.46843319399373 20 26.334911614258573 23.19102862664348 24.690569063538092 25.78349069555986 21 28.009569456662035 23.500908440688278 23.743268906664913 24.746253195984774 22 26.454447348646987 23.58005413910978 24.48202551959131 25.483472992651922 23 24.533447626104792 23.091835045715282 25.392013609901376 26.98270371827855 24 25.1406504256645 24.63866611055055 24.809940374632994 25.410743089151953 25 25.39021800908385 23.53837123203057 25.07836148719936 25.993049271686225 26 25.035433239173543 24.856650213366745 25.433283019777942 24.67463352768177 27 25.980607895505592 23.872096075924183 24.55319291203289 25.59410311653733 28 24.72602968717372 23.830525622903945 25.720680997435547 25.72276369248679 29 24.724221030945014 24.04137109296 25.655185718850422 25.579222157244573 30 24.686732520022648 24.33311282342747 25.91541298472672 25.064741671823164 31 25.536746139752125 24.152740470436964 24.21779728690604 26.092716102904866 32 25.18477067609214 24.17236165013025 24.1538914334916 26.48897624028601 33 24.533106356111258 23.663252325630467 25.250430377970783 26.553210940287485 34 25.67310785784401 23.794516921623252 25.406851737872 25.125523482660743 35 26.638820668446456 23.534673310098494 25.198637040512256 24.62786898094279 36 24.776014368403544 24.717041213794676 24.63060936916811 25.87633504863367 37 26.223158582430056 24.39838887095457 24.52477557590629 24.85367697070909 38 24.988394455865773 23.92665844184814 25.160271605357785 25.9246754969283 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 423.0 1 334.0 2 245.0 3 245.0 4 803.0 5 1361.0 6 1361.0 7 1590.0 8 1819.0 9 1766.5 10 1714.0 11 1714.0 12 2181.0 13 2648.0 14 3470.5 15 4293.0 16 4293.0 17 6459.0 18 8625.0 19 8625.0 20 9769.5 21 10914.0 22 11028.0 23 11142.0 24 11142.0 25 12339.0 26 13536.0 27 13536.0 28 18291.0 29 23046.0 30 28647.0 31 34248.0 32 34248.0 33 45790.5 34 57333.0 35 57333.0 36 63874.5 37 70416.0 38 81577.0 39 92738.0 40 92738.0 41 97453.5 42 102169.0 43 119010.5 44 135852.0 45 135852.0 46 140666.0 47 145480.0 48 145480.0 49 156862.5 50 168245.0 51 170569.5 52 172894.0 53 172894.0 54 166242.5 55 159591.0 56 159591.0 57 157248.5 58 154906.0 59 139313.0 60 123720.0 61 123720.0 62 120809.0 63 117898.0 64 97233.5 65 76569.0 66 76569.0 67 64483.5 68 52398.0 69 52398.0 70 42093.5 71 31789.0 72 24998.5 73 18208.0 74 18208.0 75 13442.5 76 8677.0 77 8677.0 78 8853.5 79 9030.0 80 6937.5 81 4845.0 82 4845.0 83 5002.0 84 5159.0 85 5159.0 86 3300.5 87 1442.0 88 1184.0 89 926.0 90 926.0 91 545.0 92 164.0 93 108.0 94 52.0 95 52.0 96 36.5 97 21.0 98 21.0 99 22.0 100 23.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008001933617931785 2 0.0 3 0.0 4 2.1923105802552835E-4 5 5.480776450638209E-5 6 2.1923105802552835E-4 7 4.384621160510567E-4 8 0.001699040699697845 9 0.004165390102485039 10 0.0010961552901276417 11 0.00602885409570203 12 3.8365435154467465E-4 13 2.740388225319104E-4 14 0.0 15 0.0 16 5.480776450638209E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 2.1923105802552835E-4 22 0.0 23 2.740388225319104E-4 24 0.0 25 1.0961552901276418E-4 26 5.480776450638209E-5 27 1.0961552901276418E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1824559.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.4839754436652 #Duplication Level Percentage of deduplicated Percentage of total 1 74.48531464478785 30.89946963638055 2 14.23377864697843 11.809474477236385 3 4.601691873144911 5.726894179945715 4 2.0732809782409043 3.4403174875665528 5 1.1393863313489385 2.3633137295263573 6 0.7203075945599294 1.7928733538765795 7 0.48176854304548355 1.398997208646044 8 0.3587324382337292 1.1905318126827331 9 0.26253398917575954 0.9801858204085208 >10 1.3753683855674506 10.317876454326527 >50 0.1100110682064361 3.1967287575257366 >100 0.12148610620860796 10.997613709848048 >500 0.023209471123276752 6.520829895150944 >1k 0.012997303829034981 9.018057796628371 >5k 1.3262554927586715E-4 0.3468356802510234 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 6304 0.3455081474482327 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 4254 0.23315223021014939 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 3417 0.18727813131830762 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 3390 0.1857983216766353 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 3317 0.1817973548676694 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 3092 0.16946560785373344 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 3034 0.16628675751236327 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 3029 0.16601271868983133 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2860 0.15675020648825277 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2847 0.1560377055496698 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2753 0.1508857756860699 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 2743 0.15033769804100608 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2715 0.14880308063482736 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2678 0.14677519334809125 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 2380 0.1304424795251894 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 2212 0.12123477508811718 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2194 0.1202482353270023 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 2187 0.11986458097545763 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGT 2103 0.11526072875692153 No Hit ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCC 2049 0.11230110947357691 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 2036 0.11158860853499393 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTT 2025 0.11098572312542372 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1995 0.10934149019023226 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 1962 0.10753283396152166 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1930 0.10577898549731743 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1925 0.10550494667478552 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1911 0.10473763797169616 No Hit CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGG 1873 0.10265494292045366 No Hit CTTTAAATCCTTTAACGAGGATCCATTGGAGGGCAAGT 1842 0.1009559022207558 No Hit GAATAATTGCAATCCCCGATCCCCATCACGAATGGGGT 1835 0.10057224786921112 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0961552901276418E-4 2 0.0 0.0 0.0 0.0 1.0961552901276418E-4 3 0.0 0.0 0.0 0.0 1.0961552901276418E-4 4 0.0 0.0 0.0 0.0 1.0961552901276418E-4 5 0.0 0.0 0.0 0.0 1.0961552901276418E-4 6 0.0 0.0 0.0 0.0 1.0961552901276418E-4 7 0.0 0.0 0.0 0.0 1.0961552901276418E-4 8 0.0 0.0 0.0 0.0 1.0961552901276418E-4 9 0.0 0.0 0.0 0.0 1.0961552901276418E-4 10 0.0 0.0 0.0 0.0 1.0961552901276418E-4 11 0.0 0.0 0.0 0.0 1.0961552901276418E-4 12 0.0 0.0 0.0 0.0 2.7403882253191047E-4 13 0.0 0.0 0.0 0.0 5.480776450638209E-4 14 0.0 0.0 0.0 5.480776450638209E-5 5.480776450638209E-4 15 0.0 0.0 0.0 5.480776450638209E-5 6.02885409570203E-4 16 0.0 0.0 0.0 5.480776450638209E-5 6.02885409570203E-4 17 0.0 0.0 0.0 1.6442329351914627E-4 6.02885409570203E-4 18 0.0 0.0 0.0 1.6442329351914627E-4 6.576931740765851E-4 19 0.0 0.0 0.0 1.6442329351914627E-4 6.576931740765851E-4 20 0.0 0.0 0.0 2.7403882253191047E-4 7.673087030893493E-4 21 0.0 0.0 0.0 4.384621160510567E-4 7.673087030893493E-4 22 0.0 0.0 0.0 7.673087030893493E-4 8.221164675957314E-4 23 0.0 0.0 0.0 0.0014250018771659342 8.221164675957314E-4 24 0.0 0.0 0.0 0.0026307726963063402 8.221164675957314E-4 25 0.0 0.0 0.0 0.003069234812357397 8.221164675957314E-4 26 0.0 0.0 0.0 0.004275005631497803 8.221164675957314E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGAACG 35 0.0020656653 22.85969 9 GCTAGTA 35 0.002067641 22.85593 2 TCTAGCG 675 0.0 18.487907 28 CTAGCGG 670 0.0 18.387081 29 ACTTATA 45 0.00885492 17.776834 2 TAGCGGC 700 0.0 17.599066 30 ACCGTCG 570 0.0 16.84398 8 TACCGTC 570 0.0 16.84398 7 ATACCGT 605 0.0 16.663012 6 GTATAGA 135 7.907147E-9 15.409123 1 ATCGTTT 515 0.0 15.222492 29 GTCGTAG 635 0.0 14.86739 11 CGTCGTA 615 0.0 14.830919 10 AAGACGG 735 0.0 14.80437 5 TCAGATA 660 0.0 14.787094 2 GTTCTAG 130 8.306779E-8 14.770876 1 CATCGTT 520 0.0 14.768446 28 GTCCTAT 600 0.0 14.6683 1 CGGTCCA 900 0.0 14.5794 10 CCGTCGT 640 0.0 14.501615 9 >>END_MODULE