##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062801_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1999682 Sequences flagged as poor quality 0 Sequence length 38 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.297397786248013 32.0 32.0 32.0 32.0 32.0 2 30.931069039977356 32.0 32.0 32.0 32.0 32.0 3 30.98089996309413 32.0 32.0 32.0 32.0 32.0 4 31.044898638883584 32.0 32.0 32.0 32.0 32.0 5 30.95199586734291 32.0 32.0 32.0 32.0 32.0 6 34.62232094903089 36.0 36.0 36.0 32.0 36.0 7 34.57060422607194 36.0 36.0 36.0 32.0 36.0 8 34.55056153928474 36.0 36.0 36.0 32.0 36.0 9 34.68438481718593 36.0 36.0 36.0 32.0 36.0 10 34.41862906202086 36.0 36.0 36.0 32.0 36.0 11 34.6609075843059 36.0 36.0 36.0 32.0 36.0 12 34.488979247700385 36.0 36.0 36.0 32.0 36.0 13 34.56849539076713 36.0 36.0 36.0 32.0 36.0 14 34.47004623735174 36.0 36.0 36.0 32.0 36.0 15 34.408333425014575 36.0 36.0 36.0 32.0 36.0 16 34.43314036931872 36.0 36.0 36.0 32.0 36.0 17 34.355148968686024 36.0 36.0 36.0 32.0 36.0 18 34.38150565939984 36.0 36.0 36.0 32.0 36.0 19 34.373160332492866 36.0 36.0 36.0 32.0 36.0 20 34.35573206139776 36.0 36.0 36.0 32.0 36.0 21 34.34262147681481 36.0 36.0 36.0 32.0 36.0 22 34.31477704955088 36.0 36.0 36.0 32.0 36.0 23 34.25345629955163 36.0 36.0 36.0 32.0 36.0 24 34.235301913004164 36.0 36.0 36.0 32.0 36.0 25 34.2149836824055 36.0 36.0 36.0 32.0 36.0 26 34.15813314316976 36.0 36.0 36.0 32.0 36.0 27 34.16554132107005 36.0 36.0 36.0 32.0 36.0 28 34.144541482095654 36.0 36.0 36.0 32.0 36.0 29 34.11752168594806 36.0 36.0 36.0 32.0 36.0 30 34.09032986244813 36.0 36.0 36.0 32.0 36.0 31 34.10568480388382 36.0 36.0 36.0 32.0 36.0 32 34.06130124689826 36.0 36.0 36.0 32.0 36.0 33 34.02712681316329 36.0 36.0 36.0 32.0 36.0 34 34.04672392910473 36.0 36.0 36.0 32.0 36.0 35 33.99480267362511 36.0 36.0 36.0 32.0 36.0 36 33.96576805712108 36.0 36.0 36.0 32.0 36.0 37 33.95506085467589 36.0 36.0 36.0 32.0 36.0 38 33.358209455303395 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 2.0 8 2.0 9 11.0 10 16.0 11 17.0 12 8.0 13 12.0 14 134.0 15 312.0 16 531.0 17 607.0 18 798.0 19 1061.0 20 1439.0 21 2178.0 22 3403.0 23 5241.0 24 7902.0 25 12050.0 26 17586.0 27 25265.0 28 36230.0 29 49845.0 30 67855.0 31 91170.0 32 126099.0 33 192055.0 34 431803.0 35 926049.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.21844111394494 16.618451528014347 11.027948758773103 26.135158599267612 2 17.122021389705424 18.97329413972106 37.055175433110264 26.849509037463253 3 19.70300624776187 22.628931358643136 27.64044460537872 30.027617788216276 4 12.760410675975056 14.558243275005875 35.252571725769265 37.428774323249804 5 15.046037458068206 36.00798329329351 33.31519706192403 15.630782186714248 6 35.70892055405031 34.474019265140214 16.315709460642083 13.501350720167387 7 31.490422722424228 29.53731120113658 20.090954507243904 18.881311569195287 8 28.79216433062156 32.596880694672535 18.869506860111336 19.741448114594565 9 27.311538124945304 14.289522047332692 18.165651918436744 40.23328790928526 10 16.172926619355504 26.015655591000307 30.949522145915147 26.86189564372904 11 38.51041261906512 20.82068731337275 21.433147249931363 19.235752817630765 12 25.307407177735058 23.093045306426994 28.00545901537686 23.594088500461087 13 29.536815486431767 18.724842150751034 25.15424812541513 26.584094237402066 14 23.72929842969643 19.3853820431851 24.285741435548935 32.59957809156953 15 25.54849165420341 26.8414023539298 21.73483525992767 25.875270731939114 16 26.516314342487412 25.383345411733405 23.163870629582227 24.93646961619696 17 24.644921461569087 25.640031691472316 24.60160578129283 25.11344106566577 18 25.76215479297706 24.169755261279853 25.61597270600897 24.45211723973412 19 25.97248145058524 24.68907600008802 24.73673734348775 24.60170520583899 20 26.060257196326 23.968099013683997 24.504816554825506 25.4668272351645 21 27.047439768827523 23.945685670647237 23.93718374070914 25.0696908198161 22 26.110490407207323 23.998735697831783 24.49025317050775 25.400520724453145 23 24.47532477275285 23.82850498255792 25.160604658722914 26.535565585966314 24 25.062181434246728 24.661859536228782 24.80950449411846 25.46645453540603 25 25.27396513452926 24.137941382714914 24.82971897754361 25.758374505212217 26 24.86206470542043 25.215937322282173 25.153615727849697 24.7683822444477 27 25.77421263396588 24.36674880456598 24.448319890691746 25.410718670776394 28 24.91863226183308 24.18397210591909 25.25895645250665 25.638439179741184 29 24.664037313738884 24.684942770062985 25.226033994872658 25.424985921325465 30 24.820591450601263 24.80603872924237 25.507519906222463 24.865849913933904 31 25.490870736997508 24.608476168995264 24.203286824744858 25.69736626926237 32 25.120778503726882 24.522387283398885 24.1488491283943 26.20798508447994 33 24.616217129956794 24.165055016171518 25.00541384534057 26.213314008531118 34 25.580381100709754 24.420494153551605 25.041974693648505 24.95715005209013 35 26.140128522669524 24.136863438661635 25.126742078370018 24.59626596029882 36 24.679025818978065 25.050840709779322 24.659069652522632 25.611063818719987 37 25.972604822463484 24.654309429070416 24.586941778746034 24.78614396972007 38 24.95153924171166 24.459379982356083 24.907129382722964 25.68195139320929 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 37.0 1 78.0 2 119.0 3 119.0 4 360.0 5 601.0 6 601.0 7 696.0 8 791.0 9 814.5 10 838.0 11 838.0 12 1144.0 13 1450.0 14 2019.5 15 2589.0 16 2589.0 17 3800.5 18 5012.0 19 5012.0 20 6488.0 21 7964.0 22 9159.5 23 10355.0 24 10355.0 25 12858.0 26 15361.0 27 15361.0 28 20135.0 29 24909.0 30 31484.5 31 38060.0 32 38060.0 33 50132.0 34 62204.0 35 62204.0 36 71098.5 37 79993.0 38 92318.5 39 104644.0 40 104644.0 41 112208.5 42 119773.0 43 136878.5 44 153984.0 45 153984.0 46 160862.0 47 167740.0 48 167740.0 49 178687.0 50 189634.0 51 193413.5 52 197193.0 53 197193.0 54 188237.0 55 179281.0 56 179281.0 57 174308.5 58 169336.0 59 152441.5 60 135547.0 61 135547.0 62 127837.5 63 120128.0 64 99881.5 65 79635.0 66 79635.0 67 66084.0 68 52533.0 69 52533.0 70 41844.5 71 31156.0 72 24354.5 73 17553.0 74 17553.0 75 13000.0 76 8447.0 77 8447.0 78 8287.5 79 8128.0 80 6363.0 81 4598.0 82 4598.0 83 4733.5 84 4869.0 85 4869.0 86 3226.0 87 1583.0 88 1405.5 89 1228.0 90 1228.0 91 910.5 92 593.0 93 511.0 94 429.0 95 429.0 96 391.5 97 354.0 98 354.0 99 693.5 100 1033.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11921895581397443 2 0.05285840448631332 3 0.01230195601100575 4 0.0026004134657410527 5 3.000477075855061E-4 6 4.000636101140081E-4 7 5.0007951264251016E-5 8 3.000477075855061E-4 9 3.500556588497571E-4 10 6.501033664352632E-4 11 0.0020503260018342917 12 0.002700429368269555 13 0.01530243308686081 14 0.009801558447793199 15 0.023603752996726478 16 0.0122519480597415 17 0.020303228213285913 18 0.006050962102974373 19 0.00790125629975166 20 0.006000954151710122 21 0.006801081371938138 22 0.008001272202280162 23 0.01035164591169996 24 0.014552313817897046 25 0.017002703429845344 26 0.01875298172409413 27 0.009951582301585953 28 0.0059009382491816195 29 0.010201622057907207 30 0.0028004452707980567 31 0.006150978005502875 32 0.007701224494694657 33 0.008951423276300932 34 0.013152091182498018 35 0.01730275113743085 36 0.015002385379275304 37 0.010301637960435709 38 0.006301001859295628 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1999682.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.02955177556105 #Duplication Level Percentage of deduplicated Percentage of total 1 78.51809967818376 40.85261532524726 2 12.765421746082891 13.283583433493856 3 3.8290631624177243 5.976733201827195 4 1.5952555525238443 3.320017254611625 5 0.8682512251896328 2.2587361037599165 6 0.5248691504189327 1.6385223982269956 7 0.3532259350801917 1.2864730954408063 8 0.24048238346138645 1.0009752497131628 9 0.18403565943821623 0.8617763584161174 >10 0.9530923827378046 8.878072034703937 >50 0.07798195729674276 2.8516057325786495 >100 0.07181002977431471 8.235051042246528 >500 0.012500193283790878 4.585628901435009 >1k 0.005910944110939872 4.970209868298987 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 3268 0.1634259847315723 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 3220 0.16102560307088828 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3034 0.15172412413573758 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2642 0.1321210072401512 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2514 0.12571998947832705 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 2418 0.12091922615695895 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2414 0.12071919435190194 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2322 0.11611846283559085 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2247 0.11236786649077204 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2242 0.11211782673445078 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2203 0.11016751663514499 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2036 0.10181618877401508 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 2003 0.10016592638229478 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.0003180505700406E-4 2 0.0 0.0 0.0 0.0 2.0003180505700406E-4 3 0.0 0.0 0.0 5.0007951264251016E-5 2.0003180505700406E-4 4 0.0 0.0 0.0 5.0007951264251016E-5 2.0003180505700406E-4 5 0.0 0.0 0.0 5.0007951264251016E-5 2.0003180505700406E-4 6 0.0 0.0 0.0 5.0007951264251016E-5 2.0003180505700406E-4 7 0.0 0.0 0.0 5.0007951264251016E-5 3.000477075855061E-4 8 0.0 0.0 0.0 5.0007951264251016E-5 3.5005565884975714E-4 9 0.0 0.0 0.0 1.0001590252850203E-4 3.5005565884975714E-4 10 0.0 0.0 0.0 1.0001590252850203E-4 3.5005565884975714E-4 11 0.0 0.0 0.0 1.0001590252850203E-4 3.5005565884975714E-4 12 0.0 0.0 0.0 1.0001590252850203E-4 6.501033664352632E-4 13 0.0 0.0 0.0 1.0001590252850203E-4 7.001113176995143E-4 14 0.0 0.0 0.0 1.0001590252850203E-4 7.001113176995143E-4 15 5.0007951264251016E-5 0.0 0.0 1.5002385379275305E-4 8.001272202280162E-4 16 5.0007951264251016E-5 0.0 0.0 2.500397563212551E-4 8.501351714922672E-4 17 5.0007951264251016E-5 0.0 0.0 2.500397563212551E-4 8.501351714922672E-4 18 5.0007951264251016E-5 0.0 0.0 2.500397563212551E-4 9.501510740207693E-4 19 5.0007951264251016E-5 0.0 0.0 2.500397563212551E-4 9.501510740207693E-4 20 5.0007951264251016E-5 0.0 0.0 3.5005565884975714E-4 9.501510740207693E-4 21 5.0007951264251016E-5 0.0 0.0 4.5007156137825917E-4 9.501510740207693E-4 22 5.0007951264251016E-5 0.0 0.0 6.000954151710122E-4 0.0010001590252850204 23 5.0007951264251016E-5 0.0 0.0 0.0011501828790777733 0.0010001590252850204 24 5.0007951264251016E-5 0.0 0.0 0.0014502305866632794 0.0010001590252850204 25 5.0007951264251016E-5 0.0 0.0 0.0017002703429845345 0.0010001590252850204 26 5.0007951264251016E-5 0.0 0.0 0.0021003339530985426 0.0010501669765492713 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 570 0.0 17.683285 28 CTAGCGG 615 0.0 16.650368 29 ATAACGA 275 0.0 16.291687 12 ACGAACG 275 0.0 16.291687 15 CGAACGA 275 0.0 16.291279 16 CAAGACG 790 0.0 16.198442 4 TAGCGGC 625 0.0 16.128365 30 ATCGTTT 510 0.0 15.999963 29 ATTACAC 220 0.0 15.997163 3 ACGCGTA 60 0.0024464636 15.996362 6 ATACGCG 60 0.002446872 15.995962 4 TAACGAA 295 0.0 15.729564 13 CGCAAGA 795 0.0 15.701611 2 TACCGTC 380 0.0 15.576963 7 AAGACGG 815 0.0 15.505288 5 CGGTCCA 685 0.0 15.416793 10 ACCGTCG 405 0.0 15.405444 8 CGCTTCG 410 0.0 15.219856 32 GATAACG 305 0.0 15.2138405 11 CGATAAC 295 0.0 15.187165 10 >>END_MODULE