##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062792_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 935768 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.24161330586214 32.0 32.0 32.0 32.0 32.0 2 30.888123979447897 32.0 32.0 32.0 32.0 32.0 3 30.946479255541973 32.0 32.0 32.0 32.0 32.0 4 31.007485829821068 32.0 32.0 32.0 32.0 32.0 5 30.93441643655265 32.0 32.0 32.0 32.0 32.0 6 34.582012849338724 36.0 36.0 36.0 32.0 36.0 7 34.51263026733122 36.0 36.0 36.0 32.0 36.0 8 34.48770742320746 36.0 36.0 36.0 32.0 36.0 9 34.620982978687024 36.0 36.0 36.0 32.0 36.0 10 34.359830641783006 36.0 36.0 36.0 32.0 36.0 11 34.60930700771986 36.0 36.0 36.0 32.0 36.0 12 34.43766403638509 36.0 36.0 36.0 32.0 36.0 13 34.51806216925563 36.0 36.0 36.0 32.0 36.0 14 34.43032995357824 36.0 36.0 36.0 32.0 36.0 15 34.37895504013815 36.0 36.0 36.0 32.0 36.0 16 34.40132490104385 36.0 36.0 36.0 32.0 36.0 17 34.32271887903839 36.0 36.0 36.0 32.0 36.0 18 34.351269759171075 36.0 36.0 36.0 32.0 36.0 19 34.32742731104291 36.0 36.0 36.0 32.0 36.0 20 34.30857648476973 36.0 36.0 36.0 32.0 36.0 21 34.288277650015814 36.0 36.0 36.0 32.0 36.0 22 34.26805789469185 36.0 36.0 36.0 32.0 36.0 23 34.21023587042942 36.0 36.0 36.0 32.0 36.0 24 34.20489159706252 36.0 36.0 36.0 32.0 36.0 25 34.17494293457353 36.0 36.0 36.0 32.0 36.0 26 34.12909610074292 36.0 36.0 36.0 32.0 36.0 27 34.13126116729788 36.0 36.0 36.0 32.0 36.0 28 34.11384873173693 36.0 36.0 36.0 32.0 36.0 29 34.08048041822332 36.0 36.0 36.0 32.0 36.0 30 34.05152559181335 36.0 36.0 36.0 32.0 36.0 31 34.06053316634038 36.0 36.0 36.0 32.0 36.0 32 34.02036722777441 36.0 36.0 36.0 32.0 36.0 33 33.97422438040198 36.0 36.0 36.0 32.0 36.0 34 33.974894418274616 36.0 36.0 36.0 32.0 36.0 35 33.93079160646656 36.0 36.0 36.0 32.0 36.0 36 33.8837564439049 36.0 36.0 36.0 32.0 36.0 37 33.895533935761854 36.0 36.0 36.0 32.0 36.0 38 33.28826055176069 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 2.0 10 6.0 11 14.0 12 5.0 13 1.0 14 151.0 15 280.0 16 408.0 17 425.0 18 572.0 19 677.0 20 877.0 21 1243.0 22 1872.0 23 2750.0 24 4027.0 25 5943.0 26 8276.0 27 12367.0 28 17519.0 29 23377.0 30 32063.0 31 43344.0 32 58792.0 33 88327.0 34 199350.0 35 433097.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.80464172761627 17.134184701899745 11.286767695356133 25.774405875127854 2 16.726310443452462 20.012188928390046 37.45935687364679 25.802143754510702 3 18.885607743929615 24.366081725091355 28.42273117376281 28.325579357216217 4 12.45894946977623 15.643604987298781 36.24159352467627 35.655852018248716 5 14.584094741634127 36.62838786619732 33.577838904170484 15.209678487998069 6 33.79919103621101 35.66792944809861 17.150246055366463 13.382633460323905 7 29.938724128202715 30.685062964324487 21.246291815920184 18.129921091552607 8 28.145741719341927 32.52472575913824 19.795568331792705 19.533964189727122 9 27.808952442221198 14.20150528924401 18.560816955502812 39.42872531303198 10 15.945366566783933 26.321700770707146 31.692606255423378 26.040326407085544 11 37.321171900464336 21.247241502759834 22.2994512393868 19.132135357389032 12 24.985038643047673 23.990535873059297 28.61017543259695 22.41425005129608 13 29.759312878294764 19.337910011938696 25.11369551299522 25.78908159677131 14 23.960661218147056 19.82339870915614 25.215060486262743 31.00087958643406 15 25.346998416928283 26.81216816689702 22.6765135651395 25.164319851035195 16 25.892405773557282 25.583527940618506 23.825275612010966 24.69879067381325 17 24.115863891246395 25.59521391786187 25.371921850983277 24.91700033990846 18 25.105294712981735 24.382311984413924 26.421946186145878 24.090447116458463 19 25.47639048309148 25.039596786087582 25.578668821244825 23.905343909576114 20 25.82699852410434 23.939433773323373 25.27212160268803 24.961446099884256 21 27.138109029507007 24.190614613502046 24.371760481345717 24.29951587564523 22 25.994102766612553 24.256246439804507 24.875573505412564 24.87407728817037 23 24.258125193711457 24.104117904816867 25.606036316222603 26.031720585249076 24 24.6854979553359 25.08021538981152 25.323587065495516 24.91069958935706 25 24.86960016417553 24.372584396483905 25.361164791189246 25.396650648151315 26 24.5584013305144 25.27998734472166 25.775189241303238 24.386422083460705 27 25.478477592670966 24.814572565717192 24.859780522317553 24.847169319294284 28 24.48995949599769 24.63904414829381 25.71523228350664 25.15576407220186 29 24.265995479102877 25.194435983348562 25.809940629826166 24.7296279077224 30 24.463443175685423 24.998530566880582 26.049789737479095 24.4882365199549 31 25.047049582404902 24.925858835222265 24.649706374269943 25.377385208102893 32 24.595062520038475 25.099497702254997 24.69808699369456 25.607352784011972 33 24.178672195622436 24.57079343365253 25.560341142270858 25.690193228454174 34 25.033319403489156 24.812721973491968 25.577117719296183 24.576840903722687 35 25.769104564873274 24.61220114129848 25.529579382664192 24.089114911164053 36 24.402071386963517 25.388064407522403 25.16863419926144 25.04123000625264 37 25.571167643327623 25.176263879077155 24.874769016032346 24.37779946156288 38 24.302857820720668 25.20024836675348 25.394538710053187 25.10235510247266 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 310.0 1 270.0 2 230.0 3 230.0 4 506.5 5 783.0 6 783.0 7 927.0 8 1071.0 9 1021.5 10 972.0 11 972.0 12 1280.0 13 1588.0 14 1962.0 15 2336.0 16 2336.0 17 3365.0 18 4394.0 19 4394.0 20 5250.5 21 6107.0 22 6382.5 23 6658.0 24 6658.0 25 7857.0 26 9056.0 27 9056.0 28 11650.5 29 14245.0 30 17520.5 31 20796.0 32 20796.0 33 26567.5 34 32339.0 35 32339.0 36 36019.5 37 39700.0 38 45801.0 39 51902.0 40 51902.0 41 55208.5 42 58515.0 43 66277.0 44 74039.0 45 74039.0 46 77437.5 47 80836.0 48 80836.0 49 84644.0 50 88452.0 51 87942.5 52 87433.0 53 87433.0 54 82927.5 55 78422.0 56 78422.0 57 76035.5 58 73649.0 59 65590.5 60 57532.0 61 57532.0 62 54925.5 63 52319.0 64 43065.0 65 33811.0 66 33811.0 67 28177.0 68 22543.0 69 22543.0 70 18057.5 71 13572.0 72 10658.5 73 7745.0 74 7745.0 75 5853.5 76 3962.0 77 3962.0 78 3857.5 79 3753.0 80 2932.0 81 2111.0 82 2111.0 83 2191.5 84 2272.0 85 2272.0 86 1529.0 87 786.0 88 664.5 89 543.0 90 543.0 91 389.5 92 236.0 93 206.5 94 177.0 95 177.0 96 166.5 97 156.0 98 156.0 99 286.5 100 417.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11926032948337623 2 0.05268399859794308 3 0.012716827247779365 4 0.0033127869300937835 5 2.1372818903830863E-4 6 3.2059228355746296E-4 7 0.0 8 3.2059228355746296E-4 9 1.0686409451915432E-4 10 4.2745637807661726E-4 11 0.002457874173940549 12 0.0025647382684597037 13 0.01656393465046892 14 0.010793273546434586 15 0.026181703157192808 16 0.01314428362585598 17 0.02372382898325226 18 0.0065187097656684125 19 0.009190312128647272 20 0.006946166143745031 21 0.0061981174821109505 22 0.008014807088936574 23 0.010472681262877124 24 0.017311983312103 25 0.019662993391524393 26 0.02030417795863932 27 0.009831496695762196 28 0.0061981174821109505 29 0.012075642680664439 30 0.0035265151191320927 31 0.005663797009515179 32 0.0072667584273024945 33 0.00940404031768558 34 0.013571740003932598 35 0.017846303784698772 36 0.017418847406622154 37 0.01036581716835797 38 0.005877525198553488 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 935768.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.30028636406225 #Duplication Level Percentage of deduplicated Percentage of total 1 83.10819041441835 50.1144768118844 2 11.239118049295428 13.554440737040299 3 2.7482587546934214 4.971623697316632 4 1.0410761841669396 2.5110876812828664 5 0.47616409823912587 1.435641574005238 6 0.29989821861245425 1.0850369077441882 7 0.19285561653898894 0.8140474232953169 8 0.129137146802615 0.6229605545948504 9 0.09174015301531392 0.49787617481156865 >10 0.508137534432968 5.926746327807035 >50 0.07168678925727258 3.062333975429042 >100 0.08430997582800104 10.63214082625698 >500 0.00729263495600002 3.092286317485063 >1k 0.002134429743219518 1.6793009910465693 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2784 0.29750963914132567 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 1830 0.19556129297005242 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1255 0.13411443862153868 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1243 0.1328320694873088 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1214 0.12973301074625335 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1151 0.12300057279154661 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1070 0.11434458113549512 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1050 0.11220729924511204 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1045 0.11167297877251625 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1010 0.10793273546434587 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1004 0.10729155089723094 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1001 0.10697095861367346 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 999 0.10675723042463515 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 999 0.10675723042463515 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 997 0.10654350223559686 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 973 0.10397876396713715 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 1.0686409451915432E-4 7 0.0 0.0 0.0 0.0 1.0686409451915432E-4 8 0.0 0.0 0.0 0.0 1.0686409451915432E-4 9 0.0 0.0 0.0 0.0 1.0686409451915432E-4 10 0.0 0.0 0.0 0.0 1.0686409451915432E-4 11 0.0 0.0 0.0 0.0 1.0686409451915432E-4 12 0.0 0.0 0.0 0.0 2.1372818903830863E-4 13 0.0 0.0 0.0 1.0686409451915432E-4 2.1372818903830863E-4 14 0.0 0.0 0.0 2.1372818903830863E-4 2.1372818903830863E-4 15 0.0 0.0 0.0 2.1372818903830863E-4 2.1372818903830863E-4 16 0.0 0.0 0.0 2.1372818903830863E-4 2.1372818903830863E-4 17 0.0 0.0 0.0 3.2059228355746296E-4 2.1372818903830863E-4 18 0.0 0.0 0.0 3.2059228355746296E-4 4.2745637807661726E-4 19 0.0 0.0 0.0 3.2059228355746296E-4 4.2745637807661726E-4 20 0.0 0.0 0.0 4.2745637807661726E-4 4.2745637807661726E-4 21 0.0 0.0 0.0 6.411845671149259E-4 4.2745637807661726E-4 22 0.0 0.0 0.0 9.617768506723889E-4 5.343204725957716E-4 23 0.0 0.0 0.0 0.0013892332287490062 5.343204725957716E-4 24 0.0 0.0 0.0 0.0024578741739405495 5.343204725957716E-4 25 0.0 0.0 0.0 0.002992194646536321 5.343204725957716E-4 26 0.0 0.0 0.0 0.0038471074026895555 5.343204725957716E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGACCGT 40 0.00448755 19.996393 6 CACCGCA 55 0.0013640826 17.45513 9 GTGTAAC 95 7.6174547E-7 16.857084 1 CGCGGTC 155 1.0913936E-11 16.516682 10 GTCTTAC 70 3.6705472E-4 16.01423 1 AACCGCG 170 3.6379788E-12 15.997968 7 TAATACC 90 8.600806E-6 15.995405 4 TCTAGCG 330 0.0 15.514839 28 GTATTAG 190 1.8189894E-12 15.171376 1 CTAGCGG 330 0.0 15.030001 29 GTATAGT 75 6.200847E-4 14.946614 1 TCCCCGC 205 0.0 14.842458 1 CCTATTC 325 0.0 14.767357 3 GTCCTAA 100 2.3053535E-5 14.412807 1 CGCTTCG 300 0.0 14.399711 32 ACCGTCG 245 0.0 14.365523 8 AAACGCT 290 0.0 14.34454 29 GGTCCTA 190 1.8189894E-11 14.316268 13 GTATATG 90 1.5221581E-4 14.234872 1 CGAACGA 90 1.5332669E-4 14.222697 16 >>END_MODULE