##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062791_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1746172 Sequences flagged as poor quality 0 Sequence length 38 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.1004832284563 32.0 32.0 32.0 32.0 32.0 2 31.314757080058552 32.0 32.0 32.0 32.0 32.0 3 31.39362044517951 32.0 32.0 32.0 32.0 32.0 4 31.497176108653672 32.0 32.0 32.0 32.0 32.0 5 31.42202887229895 32.0 32.0 32.0 32.0 32.0 6 34.93899398226521 36.0 36.0 36.0 36.0 36.0 7 34.9631273436981 36.0 36.0 36.0 36.0 36.0 8 34.91491273482796 36.0 36.0 36.0 36.0 36.0 9 35.00247684649622 36.0 36.0 36.0 36.0 36.0 10 34.874357737954796 36.0 36.0 36.0 32.0 36.0 11 35.03907232506305 36.0 36.0 36.0 36.0 36.0 12 34.94325873968887 36.0 36.0 36.0 36.0 36.0 13 34.99013900119805 36.0 36.0 36.0 36.0 36.0 14 34.937437434571166 36.0 36.0 36.0 32.0 36.0 15 34.90923288198413 36.0 36.0 36.0 32.0 36.0 16 34.91810486023141 36.0 36.0 36.0 36.0 36.0 17 34.88928639332208 36.0 36.0 36.0 32.0 36.0 18 34.88559374448794 36.0 36.0 36.0 32.0 36.0 19 34.86462960120767 36.0 36.0 36.0 32.0 36.0 20 34.847831714172486 36.0 36.0 36.0 32.0 36.0 21 34.82814064135721 36.0 36.0 36.0 32.0 36.0 22 34.81549068476645 36.0 36.0 36.0 32.0 36.0 23 34.76878222763852 36.0 36.0 36.0 32.0 36.0 24 34.74302073335273 36.0 36.0 36.0 32.0 36.0 25 34.72720556737824 36.0 36.0 36.0 32.0 36.0 26 34.65866707288858 36.0 36.0 36.0 32.0 36.0 27 34.630322786071474 36.0 36.0 36.0 32.0 36.0 28 34.590732184458346 36.0 36.0 36.0 32.0 36.0 29 34.54723818730343 36.0 36.0 36.0 32.0 36.0 30 34.511099708390695 36.0 36.0 36.0 32.0 36.0 31 34.50555558100805 36.0 36.0 36.0 32.0 36.0 32 34.4652771891887 36.0 36.0 36.0 32.0 36.0 33 34.42719445736159 36.0 36.0 36.0 32.0 36.0 34 34.38758667531034 36.0 36.0 36.0 32.0 36.0 35 34.348548711123534 36.0 36.0 36.0 32.0 36.0 36 34.296850482083094 36.0 36.0 36.0 32.0 36.0 37 34.26465663176365 36.0 36.0 36.0 32.0 36.0 38 33.84817360489116 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 5.0 20 7.0 21 33.0 22 147.0 23 416.0 24 1147.0 25 2773.0 26 6010.0 27 11982.0 28 21152.0 29 33177.0 30 50430.0 31 71872.0 32 101316.0 33 160456.0 34 385136.0 35 900113.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.30715262214703 19.26214368473412 12.861169131590447 25.5695345615284 2 13.977489044607289 21.633550417713717 40.08058770842735 24.308372829251642 3 18.178678847215508 26.14639336789274 29.714942170645276 25.959985614246477 4 11.420493331684007 17.187578743855116 37.32968419991662 34.06224372454426 5 12.671031261525211 38.66400331696992 33.94608320371647 14.718882217788396 6 31.968765927716085 37.32603354770727 17.493886620432146 13.2113139041445 7 27.824403764821763 32.019024548081084 21.63564153444835 18.520930152648805 8 26.438879512614445 35.65295427095187 19.98066584847775 17.927500367955933 9 27.288289253117092 14.323831952062227 19.397490517422572 38.99038827739811 10 15.542060484997869 28.146518745218057 32.530959504098156 23.780461265685922 11 35.94374428010341 21.338951192888373 24.119264783534486 18.598039743473734 12 24.714718498198916 24.436509618192957 30.62548320037568 20.223288683232447 13 29.97640550461868 20.8132656041508 25.889976348236427 23.320352542994097 14 22.503739608698343 21.6164845158438 26.480266548770683 29.39950932668718 15 23.651049266624362 30.08203086522977 23.7710832609846 22.495836607161266 16 23.008685861808495 26.656610377792322 27.45825007974591 22.87645368065327 17 21.837883095136103 27.302293244880804 27.686791450097697 23.173032209885395 18 22.614610702725734 25.432317091328922 30.567550046616255 21.385522159329092 19 24.730209853324872 25.13635541057811 27.426565080644977 22.706869655452042 20 24.63520203049871 25.52606501535931 27.9334452734324 21.905287680709577 21 25.230003247104666 24.815725378556856 26.234715843980915 23.719555530357564 22 24.148193877808144 26.518407121406142 27.05432225462325 22.279076746162463 23 22.485408047793797 26.19587576911271 27.818686403599198 23.500029779494298 24 23.659410413178083 26.210190061460153 27.895648309559423 22.234751215802337 25 23.480275711671013 25.9465848725097 27.935506926007285 22.637632489812002 26 21.76185594758815 27.219858318491326 28.97415486464663 22.044130869273896 27 22.914893738868493 26.597353064134648 27.96697916010469 22.52077403689217 28 21.98855553748428 26.975864920523296 27.721839543870818 23.313739998121605 29 22.4951493896363 25.734291925423154 27.65019711689341 24.120361568047134 30 22.09387162318489 26.507068032244245 28.347264759714392 23.051795584856475 31 23.44643024856658 25.59352686905986 27.507026799192747 23.45301608318081 32 22.41205333724284 27.056899320341866 27.41219078074783 23.118856561667464 33 21.89755648355374 26.65745413395702 28.607204788531714 22.837784593957526 34 22.692781696190295 26.822615412456507 28.654393725245853 21.83020916610735 35 23.036562263053124 26.93858336979404 28.172997849009146 21.851856518143688 36 21.898358237332864 27.32067631367357 27.974678324930192 22.806287124063378 37 22.751538794574646 27.114625592438774 27.047507347500705 23.086328265485875 38 22.630187633291566 27.492824303676844 27.121440499561327 22.755547563470266 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 967.0 1 761.0 2 555.0 3 555.0 4 1793.5 5 3032.0 6 3032.0 7 3523.5 8 4015.0 9 3812.5 10 3610.0 11 3610.0 12 4612.0 13 5614.0 14 6910.5 15 8207.0 16 8207.0 17 12345.0 18 16483.0 19 16483.0 20 18450.5 21 20418.0 22 20694.0 23 20970.0 24 20970.0 25 24972.0 26 28974.0 27 28974.0 28 39434.0 29 49894.0 30 62304.0 31 74714.0 32 74714.0 33 89303.5 34 103893.0 35 103893.0 36 109060.5 37 114228.0 38 121120.0 39 128012.0 40 128012.0 41 124339.0 42 120666.0 43 124535.0 44 128404.0 45 128404.0 46 133186.0 47 137968.0 48 137968.0 49 139667.0 50 141366.0 51 135622.0 52 129878.0 53 129878.0 54 122660.0 55 115442.0 56 115442.0 57 110463.5 58 105485.0 59 94400.5 60 83316.0 61 83316.0 62 78467.5 63 73619.0 64 60730.5 65 47842.0 66 47842.0 67 39784.5 68 31727.0 69 31727.0 70 25425.5 71 19124.0 72 14931.0 73 10738.0 74 10738.0 75 8043.5 76 5349.0 77 5349.0 78 5290.0 79 5231.0 80 3959.5 81 2688.0 82 2688.0 83 2588.5 84 2489.0 85 2489.0 86 1570.5 87 652.0 88 546.5 89 441.0 90 441.0 91 258.0 92 75.0 93 58.0 94 41.0 95 41.0 96 35.0 97 29.0 98 29.0 99 22.5 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008074805918317324 2 0.0 3 0.0 4 2.2907250832105883E-4 5 0.0 6 1.1453625416052942E-4 7 4.0087688956185304E-4 8 0.0022334569561303238 9 0.004295109531019854 10 0.0011453625416052943 11 0.004237841403939588 12 1.1453625416052942E-4 13 1.1453625416052942E-4 14 0.0 15 0.0 16 5.726812708026471E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 5.726812708026471E-5 22 0.0 23 2.2907250832105883E-4 24 0.0 25 0.0 26 1.1453625416052942E-4 27 1.1453625416052942E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1746172.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.80211810600661 #Duplication Level Percentage of deduplicated Percentage of total 1 73.44312815524458 35.107370861515804 2 15.338524313555155 14.664279016168349 3 5.187035074289299 7.438537897235274 4 2.2547840932572334 4.311338221177092 5 1.1245527217040832 2.687800100966488 6 0.6174175015943352 1.7708318599156763 7 0.421168242725768 1.4092913856893496 8 0.2628104562262174 1.0050317174415297 9 0.2004324267602482 0.8622985082640212 >10 0.9320853094559822 8.140542163737322 >50 0.09885181114245693 3.317697666476675 >100 0.10150936966070291 10.115832490473743 >500 0.012161584780897704 3.8945812558919544 >1k 0.00517770441166932 3.8207901594116045 >5k 2.4082346100787533E-4 0.7919592016171175 >10k+ 1.2041173050393766E-4 0.6618174940179967 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 11498 0.6584689251688837 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 8583 0.4915323347299121 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 5176 0.2964198257674502 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3707 0.2122929470865413 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 3191 0.18274259351312472 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 3064 0.1754695413739311 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCA 2678 0.1533640443209489 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 2198 0.12587534332242184 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCA 2127 0.12180930629972304 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAG 2089 0.11963311747067298 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTC 1947 0.1115010434252754 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 5.7268127080264715E-5 7 0.0 0.0 0.0 5.7268127080264715E-5 5.7268127080264715E-5 8 0.0 0.0 0.0 5.7268127080264715E-5 1.7180438124079415E-4 9 0.0 0.0 0.0 1.1453625416052943E-4 1.7180438124079415E-4 10 0.0 0.0 0.0 3.436087624815883E-4 1.7180438124079415E-4 11 0.0 0.0 0.0 3.436087624815883E-4 1.7180438124079415E-4 12 0.0 0.0 0.0 3.436087624815883E-4 1.7180438124079415E-4 13 0.0 0.0 0.0 3.436087624815883E-4 1.7180438124079415E-4 14 0.0 0.0 0.0 3.436087624815883E-4 2.2907250832105886E-4 15 0.0 0.0 0.0 4.00876889561853E-4 2.8634063540132357E-4 16 0.0 0.0 0.0 5.154131437223825E-4 3.436087624815883E-4 17 0.0 0.0 5.7268127080264715E-5 5.154131437223825E-4 3.436087624815883E-4 18 0.0 0.0 5.7268127080264715E-5 6.299493978829119E-4 3.436087624815883E-4 19 0.0 0.0 5.7268127080264715E-5 8.01753779123706E-4 3.436087624815883E-4 20 0.0 0.0 5.7268127080264715E-5 8.590219062039708E-4 3.436087624815883E-4 21 0.0 0.0 5.7268127080264715E-5 0.0013171669228460884 3.436087624815883E-4 22 0.0 0.0 5.7268127080264715E-5 0.002004384447809265 3.436087624815883E-4 23 0.0 0.0 5.7268127080264715E-5 0.003550623878976412 4.00876889561853E-4 24 0.0 0.0 5.7268127080264715E-5 0.00607042147050806 4.00876889561853E-4 25 0.0 0.0 5.7268127080264715E-5 0.007215784012113354 4.00876889561853E-4 26 0.0 0.0 5.7268127080264715E-5 0.009563777222404207 4.00876889561853E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCGTA 330 0.0 19.395536 10 CCGTCGT 340 0.0 18.825619 9 ATACCGT 355 0.0 18.03017 6 TACCGTC 350 0.0 17.830551 7 GTCGTAG 350 0.0 17.829018 11 ACCGTCG 355 0.0 17.579416 8 TCTAGCG 285 0.0 17.402948 28 CATCGTT 295 0.0 16.813017 28 CTAGCGG 305 0.0 16.261772 29 TGTAGGA 2245 0.0 16.177652 2 CTGTAGG 2140 0.0 16.149475 1 GTAGGAC 2155 0.0 16.037066 3 CGACCCG 260 0.0 16.001776 5 CTAAGGC 150 1.1459633E-10 15.999943 3 CGGCATC 320 0.0 15.999485 25 AGGACCT 1425 0.0 15.833337 5 GCATCGT 325 0.0 15.75334 27 CGGGATT 145 1.2223609E-9 15.447778 32 TAGGACA 715 0.0 15.441388 4 TAGGACC 1160 0.0 15.311167 4 >>END_MODULE