##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062790_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2200881 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.33165127964665 32.0 32.0 32.0 32.0 32.0 2 30.999623787019836 32.0 32.0 32.0 32.0 32.0 3 31.041665587553346 32.0 32.0 32.0 32.0 32.0 4 31.10798948239364 32.0 32.0 32.0 32.0 32.0 5 31.035170006919955 32.0 32.0 32.0 32.0 32.0 6 34.6869449097884 36.0 36.0 36.0 32.0 36.0 7 34.64817725265473 36.0 36.0 36.0 32.0 36.0 8 34.63296788876818 36.0 36.0 36.0 32.0 36.0 9 34.769135178140026 36.0 36.0 36.0 32.0 36.0 10 34.520514739324845 36.0 36.0 36.0 32.0 36.0 11 34.72989770914466 36.0 36.0 36.0 32.0 36.0 12 34.592930285644705 36.0 36.0 36.0 32.0 36.0 13 34.65225925436223 36.0 36.0 36.0 32.0 36.0 14 34.57337175431111 36.0 36.0 36.0 32.0 36.0 15 34.52673906494717 36.0 36.0 36.0 32.0 36.0 16 34.539836092910065 36.0 36.0 36.0 32.0 36.0 17 34.48563597941006 36.0 36.0 36.0 32.0 36.0 18 34.5026141804123 36.0 36.0 36.0 32.0 36.0 19 34.486209386150364 36.0 36.0 36.0 32.0 36.0 20 34.47717209608334 36.0 36.0 36.0 32.0 36.0 21 34.47044070079209 36.0 36.0 36.0 32.0 36.0 22 34.445855546029065 36.0 36.0 36.0 32.0 36.0 23 34.39451701386854 36.0 36.0 36.0 32.0 36.0 24 34.38031997186581 36.0 36.0 36.0 32.0 36.0 25 34.36210953704448 36.0 36.0 36.0 32.0 36.0 26 34.32076382139698 36.0 36.0 36.0 32.0 36.0 27 34.32180340509096 36.0 36.0 36.0 32.0 36.0 28 34.30707702960769 36.0 36.0 36.0 32.0 36.0 29 34.27335735098808 36.0 36.0 36.0 32.0 36.0 30 34.26660868988373 36.0 36.0 36.0 32.0 36.0 31 34.26522560738177 36.0 36.0 36.0 32.0 36.0 32 34.22900783822478 36.0 36.0 36.0 32.0 36.0 33 34.20418232516887 36.0 36.0 36.0 32.0 36.0 34 34.21131946706796 36.0 36.0 36.0 32.0 36.0 35 34.192805971790385 36.0 36.0 36.0 32.0 36.0 36 34.14216579633338 36.0 36.0 36.0 32.0 36.0 37 34.14583841652502 36.0 36.0 36.0 32.0 36.0 38 33.60113972540996 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 1.0 5 0.0 6 0.0 7 5.0 8 2.0 9 3.0 10 10.0 11 29.0 12 10.0 13 16.0 14 152.0 15 409.0 16 522.0 17 627.0 18 782.0 19 996.0 20 1374.0 21 1964.0 22 2974.0 23 4764.0 24 7347.0 25 11286.0 26 17078.0 27 25167.0 28 36169.0 29 50124.0 30 68732.0 31 94320.0 32 130254.0 33 199979.0 34 465668.0 35 1080117.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.86081560404676 17.38937193584384 11.501324493369344 26.248487966740047 2 16.434336256955024 19.232484523807898 38.22006856486135 26.113110654375728 3 19.107262872948915 22.87123120344742 28.766615332252115 29.25489059135155 4 12.760712724589398 15.260992169189846 36.21265779532296 35.765637310897795 5 14.486186409411525 36.32299139070079 34.4630956037505 14.727726596137176 6 34.5413561643151 35.68045167613339 16.588583873006527 13.189608286544996 7 30.210188651812004 30.485396750390752 20.849751008687434 18.45466358910981 8 27.5907458498268 34.18558644028367 19.243190880705466 18.980476829184067 9 26.953949245664 14.615862047657387 18.770798536582706 39.65939017009591 10 15.469316039589746 27.032318539052458 32.4966047563853 25.00176066497249 11 37.04761208061071 21.434182899417454 22.550161324107197 18.96804369586464 12 24.19744941333417 23.711768348897937 29.439978698916363 22.650803538851534 13 29.205365184648617 19.92344668943059 25.299174118564473 25.572014007356316 14 22.98079859242995 19.775277733346904 25.476581698681127 31.767341975542017 15 24.696348731540738 27.86511093962605 22.212557251318632 25.22598307751458 16 25.29440392832426 26.423442709438604 24.057214446934132 24.224938915303007 17 23.87700753478818 26.361987947974512 25.443770847913616 24.317233669323688 18 24.366556855617404 25.799613768033623 26.312620697489493 23.52120867885948 19 25.146055335853433 25.411969880588376 25.661935005432348 23.780039778125847 20 25.393501142334724 25.04071328216304 25.366328661605376 24.19945691389686 21 25.857021274275432 24.911563556324186 25.094502604359548 24.13691256504083 22 25.446990075975133 24.90571267585154 25.495701406812316 24.151595841361008 23 24.28084368889642 24.97013408195417 25.874631759705796 24.87439046944361 24 24.42456875886987 25.333425430809424 25.783400369086696 24.45860544123401 25 24.584334428384004 25.05622567890036 25.735569121116182 24.623870771599453 26 24.26241726180603 25.737378235963764 25.955832062768554 24.044372439461657 27 24.732606105550722 25.43084292806879 25.404260307922165 24.432290658458317 28 24.40946348817882 25.245086568097374 25.755866287584293 24.589583656139514 29 24.361298859694326 25.394590114321392 25.72149531181412 24.52261571417016 30 24.38041162914119 25.537482461050807 25.873039817958432 24.209066091849568 31 24.89929546585361 25.200557084078344 25.211780556129852 24.688366893938188 32 24.424474276000613 25.496392782930364 25.392563457439294 24.68656948362973 33 24.2927335096113 25.22903033638071 25.678434637120795 24.799801516887197 34 24.712702961968958 25.236697132641734 25.788638264979912 24.2619616404094 35 24.804807233936387 25.174765748230982 25.93540517978275 24.085021838049876 36 24.177225429007944 25.430053141453335 25.788919275342163 24.603802154196558 37 24.947901850995205 25.24308682782482 25.29325373275399 24.515757588425984 38 24.193170948928657 25.454561977875674 25.70879406746352 24.64347300573215 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 20.0 1 52.5 2 85.0 3 85.0 4 286.5 5 488.0 6 488.0 7 585.5 8 683.0 9 745.5 10 808.0 11 808.0 12 1202.0 13 1596.0 14 2471.5 15 3347.0 16 3347.0 17 5316.5 18 7286.0 19 7286.0 20 9799.0 21 12312.0 22 15120.0 23 17928.0 24 17928.0 25 22167.5 26 26407.0 27 26407.0 28 33690.5 29 40974.0 30 49793.5 31 58613.0 32 58613.0 33 72046.0 34 85479.0 35 85479.0 36 95297.0 37 105115.0 38 118834.0 39 132553.0 40 132553.0 41 141547.5 42 150542.0 43 163602.0 44 176662.0 45 176662.0 46 181993.5 47 187325.0 48 187325.0 49 193877.5 50 200430.0 51 201750.0 52 203070.0 53 203070.0 54 196408.5 55 189747.0 56 189747.0 57 179898.5 58 170050.0 59 151719.5 60 133389.0 61 133389.0 62 120914.0 63 108439.0 64 90254.0 65 72069.0 66 72069.0 67 59614.0 68 47159.0 69 47159.0 70 37220.0 71 27281.0 72 21660.5 73 16040.0 74 16040.0 75 12418.0 76 8796.0 77 8796.0 78 7557.5 79 6319.0 80 4904.0 81 3489.0 82 3489.0 83 3222.5 84 2956.0 85 2956.0 86 2033.0 87 1110.0 88 871.5 89 633.0 90 633.0 91 463.5 92 294.0 93 263.0 94 232.0 95 232.0 96 209.0 97 186.0 98 186.0 99 577.5 100 969.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12186029140148877 2 0.05506885651700387 3 0.012631305372712108 4 0.003952962472755228 5 2.2718175130777177E-4 6 5.452362031386522E-4 7 4.543635026155435E-5 8 4.0892715235398914E-4 9 2.2718175130777177E-4 10 3.634908020924348E-4 11 0.0014539632083697392 12 0.002453562914123935 13 0.014675941134482055 14 0.00949619720466486 15 0.022490993379469405 16 0.011268214864865478 17 0.01912870346011438 18 0.00595216188426362 19 0.007905924945510456 20 0.0056795437826942935 21 0.006724579838710044 22 0.00731525239211025 23 0.009632506255449522 24 0.014267013982128065 25 0.016993194997821325 26 0.018901521708806608 27 0.008860088301003098 28 0.005815852833478957 29 0.011041033113557707 30 0.0029533627670010327 31 0.006179343635571391 32 0.00699719794027937 33 0.008632906549695327 34 0.012903923474281436 35 0.016538831495205783 36 0.015402922738666926 37 0.010314051509372838 38 0.006179343635571391 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2200881.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.39037779195654 #Duplication Level Percentage of deduplicated Percentage of total 1 69.01064919369071 34.77472684538255 2 15.98741958440844 16.112242255537325 3 6.480402366508726 9.796497704767917 4 3.149904546423171 6.348995204114603 5 1.6676938391434575 4.201786129787861 6 0.9865969431490191 2.9828995616201124 7 0.6207535423343468 2.1896003859746114 8 0.43883795820658916 1.7690568402784688 9 0.3071810768577273 1.3931073462060826 >10 1.2361155463395777 10.361503804012608 >50 0.05894787017476871 2.0315508664465556 >100 0.0492434433977916 5.199481730045473 >500 0.004441309839532591 1.5913955791041994 >1k 0.0018127795263397895 1.2471557467215364 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3243 0.14735008389822074 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.543635026155435E-5 2 0.0 0.0 0.0 0.0 4.543635026155435E-5 3 0.0 0.0 0.0 0.0 4.543635026155435E-5 4 0.0 0.0 0.0 0.0 4.543635026155435E-5 5 0.0 0.0 0.0 0.0 4.543635026155435E-5 6 0.0 0.0 0.0 0.0 4.543635026155435E-5 7 0.0 0.0 0.0 0.0 4.543635026155435E-5 8 0.0 0.0 0.0 0.0 4.543635026155435E-5 9 0.0 0.0 0.0 0.0 4.543635026155435E-5 10 0.0 0.0 0.0 0.0 4.543635026155435E-5 11 0.0 0.0 0.0 0.0 4.543635026155435E-5 12 0.0 0.0 0.0 0.0 9.08727005231087E-5 13 0.0 0.0 0.0 0.0 9.08727005231087E-5 14 0.0 0.0 0.0 0.0 9.08727005231087E-5 15 0.0 0.0 0.0 0.0 9.08727005231087E-5 16 0.0 0.0 0.0 9.08727005231087E-5 9.08727005231087E-5 17 0.0 0.0 0.0 9.08727005231087E-5 9.08727005231087E-5 18 0.0 0.0 0.0 9.08727005231087E-5 9.08727005231087E-5 19 0.0 0.0 0.0 9.08727005231087E-5 9.08727005231087E-5 20 0.0 0.0 0.0 2.726181015693261E-4 9.08727005231087E-5 21 0.0 0.0 0.0 2.726181015693261E-4 9.08727005231087E-5 22 0.0 0.0 0.0 4.543635026155435E-4 9.08727005231087E-5 23 0.0 0.0 0.0 5.906725534002065E-4 9.08727005231087E-5 24 0.0 0.0 0.0 7.269816041848696E-4 9.08727005231087E-5 25 0.0 0.0 0.0 8.632906549695327E-4 9.08727005231087E-5 26 0.0 0.0 0.0 9.995997057541956E-4 9.08727005231087E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 740 0.0 22.510223 1 GTATCAA 2090 0.0 21.611305 1 TCTAGCG 325 0.0 16.245197 28 ATACCGG 90 8.603876E-6 15.996876 6 CGTCTTA 205 0.0 15.609191 15 CTAGCGG 340 0.0 15.529908 29 ATACCGT 380 0.0 15.154936 6 GTACTAA 150 1.9463187E-9 14.949098 1 TATCAAC 3045 0.0 14.823596 2 TCTATAC 335 0.0 14.804761 3 TAGGACG 425 0.0 14.680154 4 TGTAGGA 780 0.0 14.569864 2 TCAACGC 3020 0.0 14.567353 4 CGCCGGT 425 0.0 14.305038 7 AAGACGG 470 0.0 14.294756 5 CAACGCA 3090 0.0 14.288148 5 ATCAACG 3150 0.0 14.017902 3 TACCGTC 400 0.0 13.999175 7 GCGCAAG 505 0.0 13.95531 1 CGTCGTA 385 0.0 13.713788 10 >>END_MODULE