##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062781_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3399427 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.263022856499052 32.0 32.0 32.0 32.0 32.0 2 30.846812712848372 32.0 32.0 32.0 32.0 32.0 3 30.903509032551664 32.0 32.0 32.0 32.0 32.0 4 30.9731098799886 32.0 32.0 32.0 32.0 32.0 5 30.875255447462177 32.0 32.0 32.0 32.0 32.0 6 34.54311888444729 36.0 36.0 36.0 32.0 36.0 7 34.487071203470464 36.0 36.0 36.0 32.0 36.0 8 34.46540784667533 36.0 36.0 36.0 32.0 36.0 9 34.6159788105466 36.0 36.0 36.0 32.0 36.0 10 34.30768038260565 36.0 36.0 36.0 32.0 36.0 11 34.58813617706749 36.0 36.0 36.0 32.0 36.0 12 34.400494259767896 36.0 36.0 36.0 32.0 36.0 13 34.4948834024087 36.0 36.0 36.0 32.0 36.0 14 34.3848360326608 36.0 36.0 36.0 32.0 36.0 15 34.31818332913164 36.0 36.0 36.0 32.0 36.0 16 34.343255201538376 36.0 36.0 36.0 32.0 36.0 17 34.25840060692581 36.0 36.0 36.0 32.0 36.0 18 34.28571256273484 36.0 36.0 36.0 32.0 36.0 19 34.2817907253193 36.0 36.0 36.0 32.0 36.0 20 34.270214068429766 36.0 36.0 36.0 32.0 36.0 21 34.25802966205775 36.0 36.0 36.0 32.0 36.0 22 34.229110964877314 36.0 36.0 36.0 32.0 36.0 23 34.16458479620242 36.0 36.0 36.0 32.0 36.0 24 34.14844089901033 36.0 36.0 36.0 32.0 36.0 25 34.11697441951247 36.0 36.0 36.0 32.0 36.0 26 34.06356777186273 36.0 36.0 36.0 32.0 36.0 27 34.0719768360962 36.0 36.0 36.0 32.0 36.0 28 34.05026405920763 36.0 36.0 36.0 32.0 36.0 29 34.021463028916344 36.0 36.0 36.0 32.0 36.0 30 33.99458173392163 36.0 36.0 36.0 32.0 36.0 31 34.012624774704676 36.0 36.0 36.0 32.0 36.0 32 33.969208340111436 36.0 36.0 36.0 32.0 36.0 33 33.933115198531986 36.0 36.0 36.0 32.0 36.0 34 33.94868546963944 36.0 36.0 36.0 32.0 36.0 35 33.90472335484775 36.0 36.0 36.0 32.0 36.0 36 33.860300868352226 36.0 36.0 36.0 32.0 36.0 37 33.86585386301868 36.0 36.0 36.0 32.0 36.0 38 33.25851533214274 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 2.0 7 7.0 8 6.0 9 13.0 10 26.0 11 28.0 12 19.0 13 23.0 14 243.0 15 577.0 16 805.0 17 1027.0 18 1358.0 19 1786.0 20 2569.0 21 3957.0 22 6286.0 23 9879.0 24 15060.0 25 22658.0 26 33709.0 27 47868.0 28 67705.0 29 90007.0 30 121412.0 31 163546.0 32 222286.0 33 331031.0 34 726001.0 35 1529533.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.178737516088084 16.752489419415262 11.091604155069993 25.977168909426663 2 17.053631791683113 19.061700444991498 37.36383374936315 26.520834013962236 3 19.11657019292297 23.258934547406977 27.9691970491538 29.65529821051625 4 12.292050750045522 14.892594916582016 35.94752726054304 36.86782707282942 5 14.7741379411782 36.30542857310953 33.64250372122303 15.277929764489237 6 35.094233833105456 35.23649356242367 16.557255716864308 13.112016887606579 7 31.115753071253792 29.856658153464732 20.658340555140782 18.369248220140694 8 28.62446292213893 32.65062743166911 19.152095037556474 19.57281460863549 9 27.40538897970506 14.099732924949823 18.175841224632798 40.319036870712324 10 15.74668920781323 26.277389655214 31.31714210659311 26.65877903037966 11 38.62064076160196 20.803233313555104 21.559198920032323 19.01692700481061 12 24.95446914300793 23.34939428001234 28.50191934147275 23.19421723550698 13 29.43035349151944 18.886391385574957 25.28951587990409 26.393739243001512 14 23.695373648729152 19.591334803323807 24.59872643320394 32.1145651147431 15 25.487362772678203 26.93646799066335 21.940835902736648 25.6353333339218 16 26.452359980159184 25.342668871986145 23.331315124737646 24.873656023117018 17 24.456570510415776 25.623620995904655 24.83318077675279 25.086627716926778 18 25.601670724923164 24.363100843334827 25.75093925323962 24.28428917850239 19 25.796537460052875 24.91129480895545 24.8272451511114 24.464922579880273 20 25.895262100688743 24.06111034623156 24.602556815841716 25.441070737237986 21 27.31065836752249 23.985224871779636 23.927064572935134 24.777052187762745 22 25.907148070559018 24.024144525898322 24.802534245588 25.266173157954658 23 24.336314687952136 23.72236274854183 25.445599839488153 26.495722724017877 24 25.002287461035934 24.964511255632228 24.68801532231135 25.34518596102049 25 25.229083422112815 24.282357288640846 24.67893015062943 25.809629138616913 26 24.836156323711265 25.197693669477545 25.27869239285764 24.687457613953555 27 25.681357970610723 24.451808418092742 24.456250729965983 25.41058288133055 28 24.765424885805054 24.407726335750645 25.475085394314185 25.351763384130116 29 24.55035402403545 24.879268198324066 25.40603101501796 25.164346762622525 30 24.668764927604702 24.953115664501432 25.669346513997056 24.708772893896814 31 25.31927612310002 24.83099223005532 24.228742087965234 25.620989558879426 32 25.02643997471176 24.52123420478117 24.16623985168314 26.286085968823926 33 24.54498089665542 24.174210970235734 25.00356707558346 26.27724105752538 34 25.508413641172535 24.647514389509396 25.09820523894647 24.745866730371603 35 26.298220239349153 24.08667080135715 25.270794766752854 24.344314192540846 36 24.68876970105298 25.12311227356845 24.66193772746129 25.526180297917282 37 25.96307732861366 24.78003026679972 24.576182429251944 24.68070997533468 38 24.884260791465852 24.490495955415877 25.051180603176537 25.574062649941737 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 91.0 1 129.0 2 167.0 3 167.0 4 524.5 5 882.0 6 882.0 7 1079.5 8 1277.0 9 1284.0 10 1291.0 11 1291.0 12 1744.0 13 2197.0 14 3404.0 15 4611.0 16 4611.0 17 7058.5 18 9506.0 19 9506.0 20 12116.0 21 14726.0 22 17614.5 23 20503.0 24 20503.0 25 25785.5 26 31068.0 27 31068.0 28 39249.0 29 47430.0 30 57916.5 31 68403.0 32 68403.0 33 89240.5 34 110078.0 35 110078.0 36 125186.5 37 140295.0 38 161914.5 39 183534.0 40 183534.0 41 196126.0 42 208718.0 43 237532.0 44 266346.0 45 266346.0 46 276065.5 47 285785.0 48 285785.0 49 303119.0 50 320453.0 51 325007.5 52 329562.0 53 329562.0 54 313290.0 55 297018.0 56 297018.0 57 287638.5 58 278259.0 59 250068.5 60 221878.0 61 221878.0 62 211396.5 63 200915.0 64 167670.5 65 134426.0 66 134426.0 67 111262.0 68 88098.0 69 88098.0 70 70129.5 71 52161.0 72 40427.5 73 28694.0 74 28694.0 75 21127.5 76 13561.0 77 13561.0 78 13554.5 79 13548.0 80 10591.0 81 7634.0 82 7634.0 83 7749.0 84 7864.0 85 7864.0 86 5215.0 87 2566.0 88 2294.0 89 2022.0 90 2022.0 91 1483.5 92 945.0 93 821.5 94 698.0 95 698.0 96 650.5 97 603.0 98 603.0 99 1108.5 100 1614.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1193436423256037 2 0.05395026867763302 3 0.011825522360091862 4 0.002941672228878573 5 2.0591705602150006E-4 6 3.23583945176643E-4 7 2.9416722288785725E-5 8 3.8241738975421444E-4 9 2.353337783102858E-4 10 4.118341120430001E-4 11 0.001941503671059858 12 0.002471004672258001 13 0.014031776531750792 14 0.009178017354101146 15 0.022886209940675296 16 0.010972437413717078 17 0.02023870493468458 18 0.005412676901136574 19 0.007236513683041288 20 0.00585392773546836 21 0.005912761180045931 22 0.0067658461264207175 23 0.008854433408924504 24 0.013590525697419005 25 0.016355697592564864 26 0.017885367151581722 27 0.008707349797480576 28 0.005765677568602003 29 0.010707686913118004 30 0.0030593391180337155 31 0.005147926400537502 32 0.006412845458955288 33 0.008354349130015147 34 0.012443273528156364 35 0.01597328020281065 36 0.014620110977526506 37 0.00950160129927779 38 0.005589177234869289 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 3399427.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.82405163240041 #Duplication Level Percentage of deduplicated Percentage of total 1 74.32673314908168 34.05952057491166 2 14.309812706290037 13.11467192606028 3 4.997936503691199 6.870771012018128 4 2.181122751894204 3.997915263976131 5 1.188376556444491 2.722811434062328 6 0.7090981608271704 1.9496250440510656 7 0.45253517877376775 1.451589677832468 8 0.3052206093164074 1.118915596847021 9 0.21692898143105716 0.8946508361094714 >10 1.129619835778111 9.258506433295098 >50 0.08235879829670283 2.6131613972350474 >100 0.0745370706953682 7.17876343639135 >500 0.014669274693775627 4.722999467609014 >1k 0.010921178075204286 9.72764419773331 >5k 1.2924471094916316E-4 0.31845370186767014 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 5531 0.16270389097927387 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 5223 0.15364354051432785 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 4836 0.14225926898856778 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 4798 0.14114143354159392 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 4506 0.1325517506332685 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4501 0.13240466702182457 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 4464 0.1313162482971395 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 4404 0.12955124495981235 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 4371 0.1285804931242824 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 4070 0.11972605971535791 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 3942 0.11596071926239333 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 3941 0.11593130254010456 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 3741 0.11004795808234741 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 3713 0.10922428985826141 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 3670 0.10795937079984361 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 3604 0.10601786712878375 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 3577 0.10522361562698655 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 3539 0.1041057801800127 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 3528 0.10378219623483605 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTG 3479 0.10234077684268554 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4708361144392864E-4 2 0.0 0.0 0.0 0.0 1.4708361144392864E-4 3 0.0 0.0 0.0 0.0 1.4708361144392864E-4 4 0.0 0.0 0.0 0.0 1.4708361144392864E-4 5 2.941672228878573E-5 0.0 0.0 0.0 1.4708361144392864E-4 6 2.941672228878573E-5 0.0 0.0 0.0 2.3533377831028583E-4 7 2.941672228878573E-5 0.0 0.0 2.941672228878573E-5 2.3533377831028583E-4 8 2.941672228878573E-5 0.0 0.0 2.941672228878573E-5 2.3533377831028583E-4 9 2.941672228878573E-5 0.0 0.0 2.941672228878573E-5 2.3533377831028583E-4 10 2.941672228878573E-5 0.0 0.0 2.941672228878573E-5 3.23583945176643E-4 11 2.941672228878573E-5 0.0 0.0 2.941672228878573E-5 3.23583945176643E-4 12 2.941672228878573E-5 0.0 0.0 2.941672228878573E-5 8.530849463747861E-4 13 2.941672228878573E-5 0.0 0.0 2.941672228878573E-5 0.0010590020023962862 14 2.941672228878573E-5 0.0 0.0 2.941672228878573E-5 0.0010590020023962862 15 2.941672228878573E-5 0.0 0.0 5.883344457757146E-5 0.0012649190584177862 16 2.941672228878573E-5 0.0 0.0 1.1766688915514291E-4 0.0013531692252841435 17 2.941672228878573E-5 0.0 0.0 1.4708361144392864E-4 0.0013825859475729292 18 2.941672228878573E-5 0.0 0.0 1.4708361144392864E-4 0.0014708361144392863 19 2.941672228878573E-5 0.0 0.0 2.059170560215001E-4 0.0015002528367280721 20 2.941672228878573E-5 0.0 0.0 2.3533377831028583E-4 0.0016473364481720007 21 2.941672228878573E-5 0.0 0.0 3.23583945176643E-4 0.0016767531704607866 22 2.941672228878573E-5 0.0 0.0 4.118341120430002E-4 0.0017061698927495722 23 2.941672228878573E-5 0.0 0.0 6.177511680645003E-4 0.0017061698927495722 24 2.941672228878573E-5 0.0 0.0 9.70751835529929E-4 0.0017061698927495722 25 2.941672228878573E-5 0.0 0.0 0.0013237525029953577 0.0017061698927495722 26 5.883344457757146E-5 0.0 0.0 0.001735586615038358 0.0018238367819047151 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 1145 0.0 16.767588 28 CGCTTCG 905 0.0 16.618555 32 CGCAAGA 1195 0.0 16.60888 2 AACGCTT 930 0.0 16.515902 30 CAAGACG 1215 0.0 16.19421 4 TAGCGGC 1200 0.0 16.133112 30 CTAGCGG 1200 0.0 16.133112 29 ATCGTTT 750 0.0 15.999781 29 TAAACGC 925 0.0 15.739629 28 ACGCTTC 970 0.0 15.669888 31 AAGACGG 1290 0.0 15.625162 5 AACCGCG 740 0.0 15.566207 7 GCGCAAG 1280 0.0 15.51645 1 CATCGTT 795 0.0 15.294711 28 ACCGTCG 735 0.0 15.236988 8 GTATCAA 5870 0.0 15.171109 1 TAGCGTA 740 0.0 15.133812 7 AAACGCT 985 0.0 15.106391 29 CGCGGTC 765 0.0 15.058837 10 GTAAACG 970 0.0 15.009218 27 >>END_MODULE