##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062781_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3399427 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.207402600497083 32.0 32.0 32.0 32.0 32.0 2 31.246852778424127 32.0 32.0 32.0 32.0 32.0 3 31.362074255455404 32.0 32.0 32.0 32.0 32.0 4 31.467278750212902 32.0 32.0 32.0 32.0 32.0 5 31.380989796221538 32.0 32.0 32.0 32.0 32.0 6 34.91808060593741 36.0 36.0 36.0 36.0 36.0 7 34.945109278710795 36.0 36.0 36.0 36.0 36.0 8 34.87114769636177 36.0 36.0 36.0 32.0 36.0 9 34.99590813392963 36.0 36.0 36.0 36.0 36.0 10 34.83141923624187 36.0 36.0 36.0 32.0 36.0 11 35.02360044795785 36.0 36.0 36.0 36.0 36.0 12 34.908782862523594 36.0 36.0 36.0 32.0 36.0 13 34.97437803488647 36.0 36.0 36.0 36.0 36.0 14 34.914025804937125 36.0 36.0 36.0 32.0 36.0 15 34.88119821369896 36.0 36.0 36.0 32.0 36.0 16 34.895225577722364 36.0 36.0 36.0 32.0 36.0 17 34.86082507434341 36.0 36.0 36.0 32.0 36.0 18 34.86485340029364 36.0 36.0 36.0 32.0 36.0 19 34.86190349138252 36.0 36.0 36.0 32.0 36.0 20 34.845364527610094 36.0 36.0 36.0 32.0 36.0 21 34.84074257220408 36.0 36.0 36.0 32.0 36.0 22 34.825910660826075 36.0 36.0 36.0 32.0 36.0 23 34.7586381469583 36.0 36.0 36.0 32.0 36.0 24 34.7353121570194 36.0 36.0 36.0 32.0 36.0 25 34.712872198755846 36.0 36.0 36.0 32.0 36.0 26 34.64959565244378 36.0 36.0 36.0 32.0 36.0 27 34.63705236205984 36.0 36.0 36.0 32.0 36.0 28 34.60412475396589 36.0 36.0 36.0 32.0 36.0 29 34.56787070291552 36.0 36.0 36.0 32.0 36.0 30 34.54725340476498 36.0 36.0 36.0 32.0 36.0 31 34.54896133966107 36.0 36.0 36.0 32.0 36.0 32 34.52409626681202 36.0 36.0 36.0 32.0 36.0 33 34.491555782783394 36.0 36.0 36.0 32.0 36.0 34 34.48878708088157 36.0 36.0 36.0 32.0 36.0 35 34.45298692985612 36.0 36.0 36.0 32.0 36.0 36 34.42825599726071 36.0 36.0 36.0 32.0 36.0 37 34.42893670021448 36.0 36.0 36.0 32.0 36.0 38 33.96840849943241 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 10.0 21 62.0 22 256.0 23 751.0 24 2136.0 25 5364.0 26 11168.0 27 21856.0 28 38465.0 29 60856.0 30 92659.0 31 136399.0 32 198268.0 33 322360.0 34 787633.0 35 1721182.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.52394911159463 17.96924737079318 11.757352776774251 26.749450740837933 2 16.09421234813985 20.020815272691543 36.58725426373327 27.297718115435337 3 18.067015411714973 24.01766533006886 28.291679744851116 29.623639513365045 4 11.872234637742508 15.821174147699946 35.893780672520805 36.412810542036745 5 14.318921582326421 36.78904520617458 33.25638894813093 15.63564426336807 6 35.2185737293807 35.65008788250954 16.163586488891504 12.96775189921825 7 30.871897845862755 30.05472711162989 20.573146179398083 18.500228863109268 8 28.539161832154036 32.90279915854328 18.88123675663209 19.67680225267059 9 27.28749767599485 13.874193070110824 17.93567153746767 40.90263771642665 10 15.550610887754504 26.548326070770788 31.313965388567443 26.587097652907264 11 38.784144115733156 20.711459055302495 21.406226281658284 19.09817054730607 12 24.79304539572521 23.493263697863487 28.36348114985599 23.350209756555316 13 29.411441121461234 18.88129805596363 25.216463269344025 26.49079755323111 14 23.52261131067089 19.579240854414582 24.554873512506667 32.343274322407865 15 25.480617762934756 27.005610063107692 21.766021155918335 25.747751018039217 16 26.49912852908948 25.44968634401406 23.11749781212999 24.933687314766466 17 24.493539646534547 25.73816116657307 24.63332791085086 25.134971276041522 18 25.69774259014828 24.4432958848653 25.560278246892786 24.298683278093634 19 25.805525460614394 25.034601419592185 24.67621749194791 24.483655627845515 20 25.930840697564616 24.005045556206973 24.48086103922808 25.583252707000327 21 27.291866884468334 24.083498876132804 23.809128784502544 24.815505454896318 22 25.85657868610133 24.139729513079416 24.710914345808483 25.29277745501077 23 24.322635644958883 23.71606265293023 25.31642106638003 26.644880635730857 24 24.963383534931033 25.03736659148733 24.576965470945545 25.42228440263609 25 25.260661806235408 24.340388254010094 24.665384488666316 25.733565451088186 26 24.93827632614339 25.192172205593593 25.124278370606795 24.74527309765622 27 25.795980202534253 24.417688285518874 24.317671370893606 25.468660141053267 28 24.77017450293829 24.429881859501617 25.387572670335324 25.412370967224774 29 24.613824623973393 24.777087432676154 25.376364899143294 25.232723044207155 30 24.75270096989875 24.870838526610513 25.548040890420648 24.828419613070086 31 25.369481386127724 24.75776064613242 24.135508719557738 25.73724924818212 32 25.076490832131416 24.536429227631597 24.149128661977446 26.23795127825954 33 24.567257952590246 24.12794862192952 24.95597052091426 26.348822904565978 34 25.4828534338287 24.508071507345207 25.096788370510676 24.91228668831541 35 26.286841870703505 24.06996826229832 25.148473551572074 24.4947163154261 36 24.81497617098411 25.10305413235819 24.609088531684897 25.472881164972804 37 26.176646829009716 24.660744296024006 24.437912624686454 24.724696250279827 38 24.929833721879437 24.3489413650838 25.02743846385786 25.69378644917891 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 44.0 1 85.0 2 126.0 3 126.0 4 437.0 5 748.0 6 748.0 7 930.0 8 1112.0 9 1148.0 10 1184.0 11 1184.0 12 1655.5 13 2127.0 14 3320.5 15 4514.0 16 4514.0 17 6871.0 18 9228.0 19 9228.0 20 11758.5 21 14289.0 22 17271.5 23 20254.0 24 20254.0 25 25661.0 26 31068.0 27 31068.0 28 39319.5 29 47571.0 30 58028.5 31 68486.0 32 68486.0 33 89870.5 34 111255.0 35 111255.0 36 125536.5 37 139818.0 38 161299.5 39 182781.0 40 182781.0 41 195159.5 42 207538.0 43 236019.0 44 264500.0 45 264500.0 46 274683.0 47 284866.0 48 284866.0 49 303636.0 50 322406.0 51 326246.0 52 330086.0 53 330086.0 54 313722.0 55 297358.0 56 297358.0 57 288669.0 58 279980.0 59 251871.0 60 223762.0 61 223762.0 62 213286.5 63 202811.0 64 169317.5 65 135824.0 66 135824.0 67 112675.5 68 89527.0 69 89527.0 70 71348.0 71 53169.0 72 41113.5 73 29058.0 74 29058.0 75 21134.5 76 13211.0 77 13211.0 78 13194.5 79 13178.0 80 10302.0 81 7426.0 82 7426.0 83 7083.5 84 6741.0 85 6741.0 86 4242.5 87 1744.0 88 1492.5 89 1241.0 90 1241.0 91 731.5 92 222.0 93 153.5 94 85.0 95 85.0 96 65.5 97 46.0 98 46.0 99 44.5 100 43.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008913266853502076 2 0.0 3 0.0 4 2.353337783102858E-4 5 5.883344457757145E-5 6 5.883344457757145E-5 7 4.412508343317859E-4 8 0.002471004672258001 9 0.003618256841520644 10 8.825016686635718E-4 11 0.00467725884391693 12 2.941672228878573E-4 13 1.4708361144392864E-4 14 0.0 15 0.0 16 5.883344457757145E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 1.176668891551429E-4 22 5.883344457757145E-5 23 2.9416722288785725E-5 24 0.0 25 8.825016686635718E-5 26 5.883344457757145E-5 27 5.883344457757145E-5 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 5.883344457757145E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 3399427.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.49360064938714 #Duplication Level Percentage of deduplicated Percentage of total 1 71.94088287807887 31.28968030263495 2 15.57697394259003 13.549973679698404 3 5.462747002375114 7.127836097098197 4 2.441158588393692 4.246991070616676 5 1.2907965081328487 2.8070693922176764 6 0.7900594680620503 2.061751859589483 7 0.48298427563913443 1.4704707643207426 8 0.33369003802755204 1.1610705003719324 9 0.23418661591876727 0.9167057235182045 >10 1.2488047531532398 9.680173515234106 >50 0.08984950719150192 2.703871601421488 >100 0.07974180641862334 7.366730188070826 >500 0.01566261909066406 4.784352517672419 >1k 0.012257701896256464 10.351105263335366 >5k 2.0429503160427438E-4 0.4822175241997102 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 5944 0.17485299728454237 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 5308 0.15614396190887464 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 5029 0.1479366963903034 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 4980 0.14649527699815293 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 4655 0.13693484225429758 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 4524 0.13308125163446663 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 4499 0.132345833577247 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 4340 0.12766857473333004 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4327 0.12728615734357585 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 4214 0.12396206772494307 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 4163 0.12246181488821499 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 4053 0.11922597543644856 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 4041 0.11887297476898312 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 3763 0.11069512597270069 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 3728 0.1096655406925932 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 3713 0.10922428985826141 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 3705 0.10898895607995111 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 3603 0.10598845040649497 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGT 3583 0.10540011596071927 No Hit GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCG 3443 0.10128177484028927 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 3429 0.10086994072824626 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTG 3429 0.10086994072824626 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.7650033373271438E-4 2 0.0 0.0 0.0 0.0 1.7650033373271438E-4 3 0.0 0.0 0.0 0.0 1.7650033373271438E-4 4 0.0 0.0 0.0 0.0 1.7650033373271438E-4 5 0.0 0.0 0.0 0.0 1.7650033373271438E-4 6 0.0 0.0 0.0 0.0 2.6475050059907154E-4 7 0.0 0.0 0.0 0.0 2.6475050059907154E-4 8 0.0 0.0 0.0 0.0 2.6475050059907154E-4 9 0.0 0.0 0.0 2.941672228878573E-5 2.6475050059907154E-4 10 0.0 0.0 0.0 2.941672228878573E-5 2.6475050059907154E-4 11 0.0 0.0 0.0 2.941672228878573E-5 2.6475050059907154E-4 12 0.0 0.0 0.0 2.941672228878573E-5 5.589177234869288E-4 13 0.0 0.0 0.0 2.941672228878573E-5 7.354180572196431E-4 14 0.0 0.0 0.0 2.941672228878573E-5 7.354180572196431E-4 15 0.0 0.0 0.0 2.941672228878573E-5 9.70751835529929E-4 16 0.0 0.0 0.0 5.883344457757146E-5 0.0010001685578187147 17 0.0 0.0 0.0 5.883344457757146E-5 0.0010001685578187147 18 0.0 0.0 0.0 8.825016686635719E-5 0.0010590020023962862 19 0.0 0.0 0.0 8.825016686635719E-5 0.001088418724685072 20 0.0 0.0 0.0 1.1766688915514291E-4 0.0012060856138402147 21 0.0 0.0 0.0 1.7650033373271438E-4 0.0013531692252841435 22 0.0 0.0 0.0 2.6475050059907154E-4 0.0015296695590168578 23 0.0 0.0 0.0 4.7066755662057165E-4 0.0015296695590168578 24 0.0 0.0 0.0 7.060013349308575E-4 0.0015296695590168578 25 0.0 0.0 0.0 9.70751835529929E-4 0.0015296695590168578 26 0.0 0.0 0.0 0.0013531692252841435 0.001735586615038358 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGCGG 950 0.0 19.36794 29 TCTAGCG 1005 0.0 18.467203 28 ATCGTTT 835 0.0 18.394753 29 TAGCGGC 1045 0.0 17.760324 30 CATCGTT 875 0.0 17.55385 28 CGTTTAT 880 0.0 17.454113 31 TATAACG 70 3.6993425E-4 15.999839 2 TCGTTTA 960 0.0 15.832941 30 AGCGGCG 1180 0.0 15.457243 31 CGGCATC 985 0.0 15.431089 25 GCATCGT 985 0.0 15.268657 27 GTATTAG 875 0.0 15.178105 1 GTTTTCG 1175 0.0 15.114519 28 ACCGTCG 760 0.0 14.737777 8 GGCATCG 1065 0.0 14.722639 26 CGCAAGA 1215 0.0 14.617136 2 TAAACGC 930 0.0 14.451254 28 TTTTCGG 1215 0.0 14.353554 29 CGACGTA 180 1.1823431E-10 14.221869 31 CGCATCG 1035 0.0 14.2218685 13 >>END_MODULE