##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062780_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3323551 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26588098091469 32.0 32.0 32.0 32.0 32.0 2 30.89385449478585 32.0 32.0 32.0 32.0 32.0 3 30.942980264181294 32.0 32.0 32.0 32.0 32.0 4 31.007151387175945 32.0 32.0 32.0 32.0 32.0 5 30.919210507075114 32.0 32.0 32.0 32.0 32.0 6 34.57892657582207 36.0 36.0 36.0 32.0 36.0 7 34.520814032942475 36.0 36.0 36.0 32.0 36.0 8 34.49755126369356 36.0 36.0 36.0 32.0 36.0 9 34.637279223336726 36.0 36.0 36.0 32.0 36.0 10 34.37425271945579 36.0 36.0 36.0 32.0 36.0 11 34.625438875467836 36.0 36.0 36.0 32.0 36.0 12 34.46461540683444 36.0 36.0 36.0 32.0 36.0 13 34.53332956226638 36.0 36.0 36.0 32.0 36.0 14 34.43971523229221 36.0 36.0 36.0 32.0 36.0 15 34.391143087619234 36.0 36.0 36.0 32.0 36.0 16 34.405588480513764 36.0 36.0 36.0 32.0 36.0 17 34.34844688707951 36.0 36.0 36.0 32.0 36.0 18 34.36600160490993 36.0 36.0 36.0 32.0 36.0 19 34.35054283806687 36.0 36.0 36.0 32.0 36.0 20 34.33174908403692 36.0 36.0 36.0 32.0 36.0 21 34.31744510615303 36.0 36.0 36.0 32.0 36.0 22 34.29887761614009 36.0 36.0 36.0 32.0 36.0 23 34.245016249186484 36.0 36.0 36.0 32.0 36.0 24 34.237792048324216 36.0 36.0 36.0 32.0 36.0 25 34.216758220349256 36.0 36.0 36.0 32.0 36.0 26 34.16900146860993 36.0 36.0 36.0 32.0 36.0 27 34.18022470544307 36.0 36.0 36.0 32.0 36.0 28 34.160960972165014 36.0 36.0 36.0 32.0 36.0 29 34.12562737866818 36.0 36.0 36.0 32.0 36.0 30 34.11278840011783 36.0 36.0 36.0 32.0 36.0 31 34.122235524594025 36.0 36.0 36.0 32.0 36.0 32 34.078328269973895 36.0 36.0 36.0 32.0 36.0 33 34.04297572084797 36.0 36.0 36.0 32.0 36.0 34 34.04979794202045 36.0 36.0 36.0 32.0 36.0 35 34.0220044765373 36.0 36.0 36.0 32.0 36.0 36 33.985505864059256 36.0 36.0 36.0 32.0 36.0 37 33.984851744414335 36.0 36.0 36.0 32.0 36.0 38 33.402430111648655 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 3.0 7 4.0 8 5.0 9 12.0 10 26.0 11 43.0 12 18.0 13 23.0 14 319.0 15 748.0 16 1059.0 17 1243.0 18 1500.0 19 1979.0 20 2775.0 21 3879.0 22 5862.0 23 9134.0 24 13691.0 25 20544.0 26 30294.0 27 43524.0 28 61152.0 29 82620.0 30 112257.0 31 151067.0 32 206633.0 33 313208.0 34 706202.0 35 1553727.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.92980434129703 16.738818781861827 11.251120991129373 26.08025588571177 2 16.730944821135534 19.212670628621385 37.87153862062924 26.184845929613843 3 19.412317157831733 23.37259223394168 27.88406070981384 29.33102989841274 4 12.852120992926967 15.12613183762619 35.4798768875996 36.54187028184724 5 14.872815097845764 36.10070806881925 33.5761161193147 15.450360714020292 6 34.75118856665225 34.92702512170002 16.712837302142507 13.608949009505222 7 30.73926975673602 30.026387447157404 20.5086428668141 18.725699929292475 8 28.155112828422208 33.18856809993675 18.992598859891043 19.663720211749993 9 27.605802721432305 14.329011440799338 18.101520545538136 39.963665292230225 10 15.650303457194498 26.814116182989604 31.855829323794886 25.679751036021003 11 37.477576201798236 21.211423695297515 22.1634384220386 19.147561680865646 12 25.333824790503844 23.291880425461493 28.637319652770465 22.7369751312642 13 29.821220015630345 19.56300031627828 24.799346859771962 25.816432808319412 14 23.631208729835844 19.41154132252295 25.22150177056978 31.73574817707142 15 25.163878551855625 26.958273831647723 22.319805822613 25.55804179388365 16 25.67471599457868 25.771159878381404 23.613916325828065 24.94020780121185 17 24.35727864796111 25.695853244626697 24.994771075425017 24.952097031987176 18 24.88877187175591 25.03025561556863 25.914694510057622 24.16627800261784 19 25.6242473554757 24.77261935640731 25.40726306103424 24.195870227082743 20 25.89120513507959 24.397736371604807 25.0157296717125 24.695328821603105 21 26.61060034435382 24.1509259097663 24.80674480926638 24.4317289366135 22 25.886327739581034 24.20416990266576 25.096718884984792 24.81278347276841 23 24.696001391427437 24.231149077126123 25.51006467850624 25.5627848529402 24 24.873024346705073 24.73664476127253 25.42666768580214 24.963663206220257 25 25.028821873748306 24.394123738300095 25.382418341033713 25.19463604691789 26 24.70171413369575 25.242115102366814 25.604719728502456 24.451451035434978 27 25.249756863198236 24.78972277590009 24.950861089445457 25.00965927145622 28 24.69672856518271 24.77059996515557 25.516174526673897 25.016496942987832 29 24.644844688573702 25.0294144729438 25.477597756856806 24.84814308162569 30 24.740607857574208 24.909408706573274 25.578353532767075 24.771629903085447 31 25.116750438115048 24.86642907350704 24.885536426136692 25.13128406224122 32 24.94710070965692 24.84828315022195 24.77260526898597 25.432010871135162 33 24.47902765269132 24.68656501739107 25.306137924331463 25.528269405586144 34 25.0871023519591 24.81362293423434 25.313396940569383 24.785877773237175 35 25.42955574654947 24.56626124597047 25.411379224837553 24.592803782642505 36 24.55468647496338 25.251064382982875 25.17583233726105 25.018416804792704 37 25.302007141947946 24.954478883648598 24.9624531661362 24.781060808267256 38 24.652479486683383 25.040433854126388 25.22618133804989 25.08090532114034 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 124.0 1 221.5 2 319.0 3 319.0 4 779.5 5 1240.0 6 1240.0 7 1544.5 8 1849.0 9 1895.0 10 1941.0 11 1941.0 12 2873.5 13 3806.0 14 5204.5 15 6603.0 16 6603.0 17 9897.0 18 13191.0 19 13191.0 20 16805.0 21 20419.0 22 21337.5 23 22256.0 24 22256.0 25 27157.0 26 32058.0 27 32058.0 28 40604.5 29 49151.0 30 61079.0 31 73007.0 32 73007.0 33 90536.0 34 108065.0 35 108065.0 36 122102.0 37 136139.0 38 155658.0 39 175177.0 40 175177.0 41 191707.5 42 208238.0 43 231764.0 44 255290.0 45 255290.0 46 267102.0 47 278914.0 48 278914.0 49 296473.0 50 314032.0 51 317724.0 52 321416.0 53 321416.0 54 310735.5 55 300055.0 56 300055.0 57 290460.5 58 280866.0 59 253612.5 60 226359.0 61 226359.0 62 205131.5 63 183904.0 64 151924.0 65 119944.0 66 119944.0 67 98911.5 68 77879.0 69 77879.0 70 61922.5 71 45966.0 72 35842.5 73 25719.0 74 25719.0 75 19479.0 76 13239.0 77 13239.0 78 11666.0 79 10093.0 80 7797.0 81 5501.0 82 5501.0 83 5275.5 84 5050.0 85 5050.0 86 3411.0 87 1772.0 88 1468.0 89 1164.0 90 1164.0 91 890.0 92 616.0 93 534.5 94 453.0 95 453.0 96 409.5 97 366.0 98 366.0 99 868.0 100 1370.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1186682557300911 2 0.05385805724058394 3 0.011975143453492966 4 0.0025274172112899726 5 1.2035320053761774E-4 6 3.008830013440444E-4 7 3.0088300134404435E-5 8 2.707947012096399E-4 9 2.1061810094083103E-4 10 5.415894024192798E-4 11 0.002196445909811524 12 0.003038918313574848 13 0.01588662247096554 14 0.00983887414395025 15 0.02455205290967402 16 0.011283112550401663 17 0.020700750492470252 18 0.006047748327015292 19 0.008093752736154793 20 0.00643889622876255 21 0.006769867530240998 22 0.007822958034945154 23 0.01038046354636953 24 0.014231765963573298 25 0.016668918274460057 26 0.019497218487094077 27 0.009598167742875016 28 0.006258366427956123 29 0.010741523147982383 30 0.003249536414515679 31 0.00670969092997219 32 0.007672516534273131 33 0.008845960239514904 34 0.013509646760347592 35 0.017541478978357786 36 0.015014061767067814 37 0.011072494449460834 38 0.006679602629837785 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 3323551.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.75790726731175 #Duplication Level Percentage of deduplicated Percentage of total 1 73.29032099334492 37.93353637565058 2 14.965169411804242 15.491317013115482 3 5.210929647102128 8.091204403535922 4 2.3507819229041584 4.866862110853849 5 1.2044213079734134 3.116916318443113 6 0.7286796796716721 2.26289611728125 7 0.4843786397604227 1.7549297303290596 8 0.31112191226193936 1.2882415266945728 9 0.21942921490066314 1.0221477260910792 >10 1.0951464626719252 10.100249392034033 >50 0.07485199275094659 2.676824154277424 >100 0.053968550584036455 5.6834455958762 >500 0.0073558556668340686 2.6118249827129287 >1k 0.0033276489890311156 2.6739494187269908 >5k 1.1675961365021457E-4 0.42565513437755237 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 8958 0.26953099260399493 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 5129 0.15432289138936037 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8052980080642662E-4 2 0.0 0.0 0.0 0.0 1.8052980080642662E-4 3 0.0 0.0 0.0 0.0 1.8052980080642662E-4 4 0.0 0.0 0.0 0.0 1.8052980080642662E-4 5 0.0 0.0 0.0 0.0 2.1061810094083106E-4 6 6.0176600268808876E-5 0.0 0.0 0.0 3.6105960161285323E-4 7 6.0176600268808876E-5 0.0 0.0 0.0 3.6105960161285323E-4 8 6.0176600268808876E-5 0.0 0.0 3.0088300134404438E-5 3.6105960161285323E-4 9 6.0176600268808876E-5 0.0 0.0 3.0088300134404438E-5 3.6105960161285323E-4 10 6.0176600268808876E-5 0.0 0.0 3.0088300134404438E-5 3.911479017472577E-4 11 6.0176600268808876E-5 0.0 0.0 3.0088300134404438E-5 3.911479017472577E-4 12 6.0176600268808876E-5 0.0 0.0 3.0088300134404438E-5 7.522075033601109E-4 13 6.0176600268808876E-5 0.0 0.0 3.0088300134404438E-5 9.929139044353465E-4 14 6.0176600268808876E-5 0.0 0.0 3.0088300134404438E-5 0.0010530905047041552 15 6.0176600268808876E-5 0.0 0.0 3.0088300134404438E-5 0.0013238852059137953 16 6.0176600268808876E-5 0.0 0.0 3.0088300134404438E-5 0.0013539735060481997 17 6.0176600268808876E-5 3.0088300134404438E-5 0.0 1.2035320053761775E-4 0.0013539735060481997 18 6.0176600268808876E-5 3.0088300134404438E-5 0.0 1.5044150067202217E-4 0.0015044150067202219 19 6.0176600268808876E-5 3.0088300134404438E-5 0.0 2.407064010752355E-4 0.0015044150067202219 20 6.0176600268808876E-5 3.0088300134404438E-5 0.0 3.6105960161285323E-4 0.0016849448075266485 21 6.0176600268808876E-5 3.0088300134404438E-5 0.0 4.5132450201606654E-4 0.0017752097079298617 22 9.026490040321331E-5 3.0088300134404438E-5 3.0088300134404438E-5 5.415894024192798E-4 0.0018353863081986706 23 9.026490040321331E-5 3.0088300134404438E-5 3.0088300134404438E-5 7.221192032257065E-4 0.0019557395087362885 24 9.026490040321331E-5 3.0088300134404438E-5 3.0088300134404438E-5 0.0012637086056449863 0.001985827808870693 25 9.026490040321331E-5 3.0088300134404438E-5 3.0088300134404438E-5 0.0014743267065858174 0.0020159161090050975 26 9.026490040321331E-5 3.0088300134404438E-5 3.0088300134404438E-5 0.0016247682072578395 0.0021663576096771194 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 5770 0.0 16.653873 1 TTACGCT 60 0.002445857 15.997405 4 TCTAGCG 555 0.0 14.989913 28 TCAATCG 65 0.004164106 14.769057 25 CTAGCGG 590 0.0 14.643895 29 GTATTAC 255 0.0 14.445332 1 AACGCAG 6770 0.0 14.012287 6 GTCCTAT 895 0.0 13.420789 1 GTATTAG 575 0.0 13.36944 1 ATACCGT 530 0.0 13.280664 6 GTATAGG 290 0.0 13.254187 1 TAGCGGC 640 0.0 13.249844 30 AAGACGG 870 0.0 13.239032 5 GCGCAAG 825 0.0 13.200636 1 AGCGAAA 800 0.0 13.199448 17 ACCGTCG 485 0.0 13.1945305 8 CAAGACG 900 0.0 13.153421 4 CGTCGTA 500 0.0 13.120043 10 TCGTTTA 515 0.0 13.04839 30 TGTAGGA 785 0.0 12.844479 2 >>END_MODULE