##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062779_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3407753 Sequences flagged as poor quality 0 Sequence length 38 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.164776907246505 32.0 32.0 32.0 32.0 32.0 2 30.873846490634737 32.0 32.0 32.0 32.0 32.0 3 30.934872920660624 32.0 32.0 32.0 32.0 32.0 4 30.965712303679286 32.0 32.0 32.0 32.0 32.0 5 30.951588627462144 32.0 32.0 32.0 32.0 32.0 6 34.578155752485586 36.0 36.0 36.0 32.0 36.0 7 34.47277252782112 36.0 36.0 36.0 32.0 36.0 8 34.46089696054849 36.0 36.0 36.0 32.0 36.0 9 34.539743637523024 36.0 36.0 36.0 32.0 36.0 10 34.341441119705564 36.0 36.0 36.0 32.0 36.0 11 34.570769360338026 36.0 36.0 36.0 32.0 36.0 12 34.41914540167671 36.0 36.0 36.0 32.0 36.0 13 34.48338773379409 36.0 36.0 36.0 32.0 36.0 14 34.41199611591568 36.0 36.0 36.0 32.0 36.0 15 34.37957533894035 36.0 36.0 36.0 32.0 36.0 16 34.3952742466957 36.0 36.0 36.0 32.0 36.0 17 34.334685935277584 36.0 36.0 36.0 32.0 36.0 18 34.3612092777851 36.0 36.0 36.0 32.0 36.0 19 34.3270803371019 36.0 36.0 36.0 32.0 36.0 20 34.2885611134375 36.0 36.0 36.0 32.0 36.0 21 34.261398053203976 36.0 36.0 36.0 32.0 36.0 22 34.242982399252526 36.0 36.0 36.0 32.0 36.0 23 34.2198539624204 36.0 36.0 36.0 32.0 36.0 24 34.202683997343705 36.0 36.0 36.0 32.0 36.0 25 34.18016740063027 36.0 36.0 36.0 32.0 36.0 26 34.14921944166728 36.0 36.0 36.0 32.0 36.0 27 34.1447311468877 36.0 36.0 36.0 32.0 36.0 28 34.11204773350651 36.0 36.0 36.0 32.0 36.0 29 34.071550960412914 36.0 36.0 36.0 32.0 36.0 30 34.03667255226538 36.0 36.0 36.0 32.0 36.0 31 34.040939586877336 36.0 36.0 36.0 32.0 36.0 32 33.99594424830673 36.0 36.0 36.0 32.0 36.0 33 33.96882960707539 36.0 36.0 36.0 32.0 36.0 34 33.947267011429524 36.0 36.0 36.0 32.0 36.0 35 33.91276832563862 36.0 36.0 36.0 32.0 36.0 36 33.86267109147875 36.0 36.0 36.0 32.0 36.0 37 33.83578856800948 36.0 36.0 36.0 32.0 36.0 38 33.20681428495551 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 2.0 8 5.0 9 12.0 10 31.0 11 44.0 12 18.0 13 17.0 14 879.0 15 1687.0 16 1996.0 17 2465.0 18 3078.0 19 3832.0 20 4730.0 21 6118.0 22 8474.0 23 11616.0 24 15584.0 25 21822.0 26 31325.0 27 44125.0 28 61423.0 29 83799.0 30 112802.0 31 151377.0 32 206436.0 33 312055.0 34 715006.0 35 1606994.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.96248572472001 18.625542108072867 12.608961482378566 24.803010684828557 2 14.546443222750597 20.779127356690104 41.322835274511164 23.351594146048136 3 18.54373790275835 26.239542627047634 29.1638944203376 26.05282504985641 4 11.856667411075215 16.69067653237869 37.72091252945231 33.73174352709378 5 13.029055871257972 38.18293328872906 34.22756104109902 14.560449798913943 6 31.14673520076626 37.3560044416482 18.287641325169965 13.209619032415581 7 27.875737436292315 31.903759428503015 22.076782582770107 18.143720552434566 8 26.1646184414512 35.37797847081958 20.350747869486792 18.106655218242434 9 27.455698015228826 14.932060704019193 20.00326902106611 37.60897225968587 10 15.805006422139229 27.762745019210662 32.64462725035309 23.787621308297016 11 34.94403108259395 21.986914908757974 24.71923103446758 18.349822974180494 12 25.275783331479662 24.439314168063277 30.33444974068693 19.95045275977013 13 29.157477916182163 21.447761623316897 26.097557969104667 23.297202491396277 14 22.336688069950853 22.089169492117353 26.880769943015554 28.693372494916243 15 22.98487284258886 30.639178683144507 23.899188680447057 22.47675979381958 16 22.61291489880603 27.188970251810268 27.582529266732937 22.61558558265077 17 21.49387134296265 27.848267712583436 27.690622939002246 22.967238005451673 18 22.157337122552722 25.88710051350496 30.719822559354753 21.23573980458756 19 24.335515096306988 25.502268679370644 27.654762788669313 22.50745343565306 20 24.62886868410596 25.74447829733586 27.945118404579944 21.681534613978236 21 25.01315470134206 25.263893727034297 26.50159485163287 23.221356719990773 22 24.244012540583306 26.962576929634864 27.001109612128786 21.792300917653044 23 21.854800439160922 26.860571689850964 28.22644902707543 23.05817884391269 24 23.521112829999407 26.399277303836154 28.243349971428493 21.836259894735946 25 23.004929910855402 26.42651756110146 28.29120784136705 22.27734468667609 26 21.47479039199031 27.839841459269742 28.9718978807035 21.713470268036446 27 22.52552865856969 27.242640746952627 27.738848315966948 22.49298227851073 28 21.541537064639165 27.50571011933218 27.742449333787615 23.210303482241038 29 22.51548265197534 26.512592439547074 27.58298061667648 23.388944291801106 30 21.792548591390375 26.98413071056866 28.298261764482334 22.92505893355863 31 23.333201273061025 26.233949174403197 27.348596566139456 23.084252986396326 32 22.18307988802371 27.5584760354124 27.27064097006991 22.987803106493985 33 21.387874935362298 27.231475465259397 28.784453143021153 22.596196456357152 34 22.372927617387322 27.280904878041625 28.61597565234745 21.7301918522236 35 22.62144416663267 27.382679474510173 28.218208414399815 21.77766794445734 36 21.491550912881777 27.730368815507724 28.200545193282995 22.57753507832751 37 22.45425499226541 27.659012490678435 26.97177718867143 22.91495532838472 38 22.112198242720556 28.325360817481233 27.222453734952488 22.339987204845723 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2967.0 1 2252.5 2 1538.0 3 1538.0 4 3402.5 5 5267.0 6 5267.0 7 6091.0 8 6915.0 9 6473.0 10 6031.0 11 6031.0 12 8135.0 13 10239.0 14 13109.5 15 15980.0 16 15980.0 17 22864.5 18 29749.0 19 29749.0 20 36246.0 21 42743.0 22 43808.5 23 44874.0 24 44874.0 25 54172.5 26 63471.0 27 63471.0 28 82167.0 29 100863.0 30 126555.5 31 152248.0 32 152248.0 33 181086.0 34 209924.0 35 209924.0 36 221970.5 37 234017.0 38 247428.0 39 260839.0 40 260839.0 41 254426.0 42 248013.0 43 254421.5 44 260830.0 45 260830.0 46 261661.5 47 262493.0 48 262493.0 49 266374.0 50 270255.0 51 261132.0 52 252009.0 53 252009.0 54 236142.5 55 220276.0 56 220276.0 57 210364.5 58 200453.0 59 175953.0 60 151453.0 61 151453.0 62 140283.0 63 129113.0 64 105623.0 65 82133.0 66 82133.0 67 69629.0 68 57125.0 69 57125.0 70 44874.0 71 32623.0 72 25654.5 73 18686.0 74 18686.0 75 13971.0 76 9256.0 77 9256.0 78 9153.0 79 9050.0 80 7029.0 81 5008.0 82 5008.0 83 5055.0 84 5102.0 85 5102.0 86 3430.5 87 1759.0 88 1557.5 89 1356.0 90 1356.0 91 973.0 92 590.0 93 543.5 94 497.0 95 497.0 96 451.0 97 405.0 98 405.0 99 1004.0 100 1603.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12154636794392082 2 0.05625407710007151 3 0.01373338971457145 4 0.0036974510770000054 5 2.3475879853968292E-4 6 2.6410364835714327E-4 7 2.9344849817460365E-5 8 1.7606909890476217E-4 9 1.4672424908730182E-4 10 2.9344849817460365E-4 11 0.001702001289412701 12 0.0028171055824761948 13 0.014877838857452403 14 0.00974249013939684 15 0.02447360474776194 16 0.011327112029539699 17 0.021304360967476222 18 0.0056048663151349295 19 0.007747040351809535 20 0.005839625113674612 21 0.006631936058746042 22 0.0075122815532698535 23 0.010153318036841285 24 0.015024563106539707 25 0.017372151091936537 26 0.019925153026055586 27 0.009038213743777793 28 0.0060450390623968345 29 0.011473836278627001 30 0.002993174681380957 31 0.006397177260206359 32 0.007218833055095249 33 0.008774110095420649 34 0.012999768469134941 35 0.016726564395952406 36 0.01528866675489685 37 0.00974249013939684 38 0.0062504530111190575 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 3407753.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.09963119629187 #Duplication Level Percentage of deduplicated Percentage of total 1 71.35210526429616 32.179536324987524 2 15.293208545705141 13.79436130438562 3 5.8886571640106595 7.967287990148482 4 2.739108117948141 4.941310637049211 5 1.4637645044172944 3.3007619653721463 6 0.8295021107262059 2.2446143562178533 7 0.524680689481957 1.6564033914016678 8 0.35220454824985725 1.2707436185380117 9 0.24801497175445703 1.0066845381556282 >10 1.1085169026048236 8.706410970275865 >50 0.08977110549046931 2.8727829925340775 >100 0.08903317158697746 8.588286885731968 >500 0.01385297436163619 4.294515988195789 >1k 0.00718786405420416 5.511951224931437 >5k 2.613768746983331E-4 0.6986158586487341 >10k+ 1.3068843734916655E-4 0.9657319534260954 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 20234 0.593763691206493 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 12536 0.36786703731168313 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 6818 0.20007318605544475 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6135 0.1800306536301193 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCA 5392 0.15822743021574628 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCA 5361 0.15731773987140502 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAG 4819 0.1414128312703415 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTC 4566 0.13398858426652402 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 4446 0.13046720228842879 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 2.9344849817460362E-5 0.0 5 2.9344849817460362E-5 0.0 0.0 5.8689699634920724E-5 0.0 6 2.9344849817460362E-5 0.0 0.0 5.8689699634920724E-5 0.0 7 2.9344849817460362E-5 0.0 0.0 5.8689699634920724E-5 0.0 8 2.9344849817460362E-5 0.0 0.0 8.803454945238109E-5 0.0 9 2.9344849817460362E-5 0.0 0.0 8.803454945238109E-5 0.0 10 2.9344849817460362E-5 0.0 0.0 8.803454945238109E-5 0.0 11 2.9344849817460362E-5 0.0 0.0 1.1737939926984145E-4 0.0 12 2.9344849817460362E-5 0.0 0.0 1.1737939926984145E-4 0.0 13 2.9344849817460362E-5 0.0 0.0 1.467242490873018E-4 0.0 14 2.9344849817460362E-5 0.0 0.0 1.467242490873018E-4 0.0 15 2.9344849817460362E-5 0.0 0.0 1.467242490873018E-4 0.0 16 2.9344849817460362E-5 0.0 0.0 2.0541394872222252E-4 0.0 17 2.9344849817460362E-5 0.0 0.0 2.347587985396829E-4 0.0 18 2.9344849817460362E-5 0.0 0.0 2.934484981746036E-4 0.0 19 2.9344849817460362E-5 0.0 0.0 2.934484981746036E-4 0.0 20 2.9344849817460362E-5 0.0 0.0 5.575521465317469E-4 0.0 21 2.9344849817460362E-5 0.0 0.0 9.977248937936523E-4 0.0 22 2.9344849817460362E-5 0.0 0.0 0.0015846218901428596 0.0 23 2.9344849817460362E-5 0.0 0.0 0.0034333474286428623 0.0 24 2.9344849817460362E-5 0.0 0.0 0.0061037287620317555 0.0 25 2.9344849817460362E-5 0.0 0.0 0.007072108806007948 0.0 26 2.9344849817460362E-5 0.0 0.0 0.009361007091769855 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGCGG 665 0.0 17.563572 29 TCTAGCG 670 0.0 17.431988 28 TAGCGGC 680 0.0 17.176392 30 TGTAGGA 4535 0.0 16.163198 2 GTCCTAC 4125 0.0 15.916505 1 ATCGTTT 545 0.0 15.559334 29 GATATAC 1260 0.0 15.505192 1 GTAGGAC 4515 0.0 15.306878 3 CTGTAGG 4565 0.0 15.294439 1 AGGACCT 2875 0.0 14.9664135 5 TCCTACA 4555 0.0 14.827338 2 CATCGTT 585 0.0 14.768514 28 TAACGCA 65 0.0041700336 14.765913 4 TTAGGAC 2900 0.0 14.673856 3 TAGGACC 2150 0.0 14.508368 4 CGGTCCA 830 0.0 14.457977 10 ATACCGT 675 0.0 14.455374 6 TTTAGAA 1840 0.0 14.438743 2 CCTACAG 4550 0.0 14.345293 3 GATAACG 425 0.0 14.306027 11 >>END_MODULE