##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062777_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4357710 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.277511353440225 32.0 32.0 32.0 32.0 32.0 2 30.91591386301521 32.0 32.0 32.0 32.0 32.0 3 30.96210142483093 32.0 32.0 32.0 32.0 32.0 4 31.027132599461645 32.0 32.0 32.0 32.0 32.0 5 30.94393660890697 32.0 32.0 32.0 32.0 32.0 6 34.60003258592242 36.0 36.0 36.0 32.0 36.0 7 34.541435754100206 36.0 36.0 36.0 32.0 36.0 8 34.529054250971264 36.0 36.0 36.0 32.0 36.0 9 34.65737095859981 36.0 36.0 36.0 32.0 36.0 10 34.392493534448136 36.0 36.0 36.0 32.0 36.0 11 34.62738479614293 36.0 36.0 36.0 32.0 36.0 12 34.4623304442012 36.0 36.0 36.0 32.0 36.0 13 34.54399099527045 36.0 36.0 36.0 32.0 36.0 14 34.44400132179516 36.0 36.0 36.0 32.0 36.0 15 34.39598068710401 36.0 36.0 36.0 32.0 36.0 16 34.40698968035964 36.0 36.0 36.0 32.0 36.0 17 34.33191263301138 36.0 36.0 36.0 32.0 36.0 18 34.35576942935624 36.0 36.0 36.0 32.0 36.0 19 34.350786766443846 36.0 36.0 36.0 32.0 36.0 20 34.335820878397136 36.0 36.0 36.0 32.0 36.0 21 34.319906785903605 36.0 36.0 36.0 32.0 36.0 22 34.29661955476615 36.0 36.0 36.0 32.0 36.0 23 34.23932134079597 36.0 36.0 36.0 32.0 36.0 24 34.2184209137368 36.0 36.0 36.0 32.0 36.0 25 34.19638411000273 36.0 36.0 36.0 32.0 36.0 26 34.14718372723288 36.0 36.0 36.0 32.0 36.0 27 34.150866395423286 36.0 36.0 36.0 32.0 36.0 28 34.13547230081855 36.0 36.0 36.0 32.0 36.0 29 34.103420144984405 36.0 36.0 36.0 32.0 36.0 30 34.08004777738766 36.0 36.0 36.0 32.0 36.0 31 34.101371591959996 36.0 36.0 36.0 32.0 36.0 32 34.05088383577613 36.0 36.0 36.0 32.0 36.0 33 34.021424096601194 36.0 36.0 36.0 32.0 36.0 34 34.0349135210925 36.0 36.0 36.0 32.0 36.0 35 33.98606033903128 36.0 36.0 36.0 32.0 36.0 36 33.95192245468377 36.0 36.0 36.0 32.0 36.0 37 33.95533640375335 36.0 36.0 36.0 32.0 36.0 38 33.36306706963061 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 4.0 8 11.0 9 18.0 10 43.0 11 43.0 12 27.0 13 20.0 14 324.0 15 857.0 16 1254.0 17 1465.0 18 1865.0 19 2366.0 20 3307.0 21 5050.0 22 7615.0 23 11723.0 24 17903.0 25 26812.0 26 39948.0 27 57230.0 28 81019.0 29 109448.0 30 148443.0 31 200051.0 32 274726.0 33 412408.0 34 929753.0 35 2023976.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.89179107220974 16.842009249081894 11.214190135538015 26.052009543170346 2 17.06677981699404 19.029621139273175 37.194014237470576 26.70958480626221 3 19.482712600847655 22.871271881356588 27.782601221750436 29.86341429604532 4 12.715928633684706 14.852622124145224 35.376381445272074 37.055067796898 5 15.085548431778456 35.96074724620081 33.27401314498657 15.679691177034162 6 35.38085934362593 34.77078953153707 16.36985858129682 13.478492543540192 7 31.30965575956179 29.757143086621184 20.262890371318882 18.67031078249815 8 28.632004473922805 32.540376258376845 18.997397019572496 19.830222248127853 9 27.3114424326038 14.403994216216304 18.240466704806042 40.04409664637386 10 16.00731121305095 26.063900828191084 30.952385323416763 26.976402635341202 11 38.32978170203841 20.934537231545093 21.627529877534123 19.108151188882378 12 25.308181446624378 23.254380471358065 28.01381225676 23.423625825257556 13 29.360180028620054 18.874017835318796 25.1940460192996 26.571756116761552 14 23.79259111019515 19.56807715593075 24.496328694840344 32.14300303903375 15 25.485916902471406 26.80372262385028 21.894791301329995 25.815569172348322 16 26.50873306723167 25.492193208899593 23.094386527960868 24.90468719590786 17 24.54912673753329 25.63989861419663 24.641533521100122 25.169441127169957 18 25.605670295322142 24.345000338501116 25.709584400950558 24.33974496522618 19 25.75476026058796 24.82199727037619 24.977893810886687 24.445348658149157 20 25.932953478317145 24.033058769207326 24.58058057782392 25.45340717465161 21 27.178699723483607 24.010316179708806 24.124856251177587 24.68612784563 22 25.973631958169513 23.95827691584607 24.78627143367277 25.281819692311647 23 24.475988931685492 23.76559536942921 25.336452388094195 26.421963310791103 24 24.93265018812963 24.82592787591385 24.842269012752055 25.39915292320446 25 25.263280385003096 24.201184681401124 24.866558089233024 25.668976844362756 26 24.868415737413542 25.273749433083676 25.315154981610792 24.54267984789199 27 25.710238030432315 24.387068997567784 24.540373466209445 25.36231950579046 28 24.73087458530773 24.42792203142757 25.49301793159666 25.348185451668044 29 24.643488933790014 24.73499206376164 25.4252244775807 25.196294524867646 30 24.658863692118242 24.90914085353554 25.654120451104735 24.777875003241487 31 25.365798468555262 24.726135950029533 24.30240227435562 25.60566330705958 32 25.016994024437427 24.58090968634149 24.301661490048915 26.100434799172167 33 24.575113779199846 24.23098204570997 25.067615746568496 26.126288428521693 34 25.551381865693685 24.483743991825925 25.105153804436757 24.859720338043633 35 26.15674192143166 24.158679942401026 25.251100407571965 24.433477728595356 36 24.62088376033184 25.132423587475994 24.714915466712387 25.531777185479775 37 26.000992816880363 24.671155227125794 24.642192330615824 24.685659625378015 38 24.793141868361236 24.472082901601965 25.150529380108345 25.584245849928454 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 182.0 1 274.0 2 366.0 3 366.0 4 947.0 5 1528.0 6 1528.0 7 1828.5 8 2129.0 9 2091.0 10 2053.0 11 2053.0 12 2849.0 13 3645.0 14 5310.0 15 6975.0 16 6975.0 17 10544.0 18 14113.0 19 14113.0 20 17956.0 21 21799.0 22 24336.5 23 26874.0 24 26874.0 25 33269.5 26 39665.0 27 39665.0 28 49730.0 29 59795.0 30 73092.5 31 86390.0 32 86390.0 33 112132.5 34 137875.0 35 137875.0 36 155680.0 37 173485.0 38 200168.0 39 226851.0 40 226851.0 41 243703.5 42 260556.0 43 297925.5 44 335295.0 45 335295.0 46 346952.5 47 358610.0 48 358610.0 49 384000.0 50 409390.0 51 416513.0 52 423636.0 53 423636.0 54 406019.5 55 388403.0 56 388403.0 57 376654.5 58 364906.0 59 328427.5 60 291949.0 61 291949.0 62 275648.0 63 259347.0 64 215816.0 65 172285.0 66 172285.0 67 142975.0 68 113665.0 69 113665.0 70 91342.5 71 69020.0 72 53838.5 73 38657.0 74 38657.0 75 28775.5 76 18894.0 77 18894.0 78 18640.0 79 18386.0 80 14225.0 81 10064.0 82 10064.0 83 10232.0 84 10400.0 85 10400.0 86 6880.5 87 3361.0 88 2963.0 89 2565.0 90 2565.0 91 1835.5 92 1106.0 93 958.5 94 811.0 95 811.0 96 731.5 97 652.0 98 652.0 99 1339.5 100 2027.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12111866094806677 2 0.05603860743372092 3 0.011909925167117592 4 0.003120905246104032 5 6.884349807582423E-5 6 2.753739923032969E-4 7 0.0 8 2.983218249952383E-4 9 2.0653049422747268E-4 10 4.589566538388282E-4 11 0.0020194092768908442 12 0.0030061660826443248 13 0.01434239543246338 14 0.00927092440754433 15 0.022901937026557528 16 0.010969064026747993 17 0.020354727597752028 18 0.006081175663364473 19 0.00764162828641649 20 0.005920540834520884 21 0.006494236651819419 22 0.007205619465269602 23 0.009339767905620154 24 0.013952282276700378 25 0.01739445718049159 26 0.018495953149704775 27 0.008444802430634439 28 0.0060123321652886495 29 0.01106085535751576 30 0.0032356444095637386 31 0.005874645169137001 32 0.006792558476814657 33 0.008421854597942497 34 0.011955820832501475 35 0.01578810889205569 36 0.015352100070908804 37 0.009431559236387919 38 0.005851697336445059 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 4357710.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.01448835667548 #Duplication Level Percentage of deduplicated Percentage of total 1 74.45823030513947 33.51699141129362 2 14.052368842012338 12.651203872449477 3 4.881139396331678 6.591659775704469 4 2.230471338011656 4.016141042992963 5 1.1466333158280184 2.580755602235827 6 0.7036741943358165 1.9005320296693564 7 0.45815327952922125 1.443647482685857 8 0.32556197995449265 1.172400476483018 9 0.25600465147856244 1.037152656291286 >10 1.3041555578957085 10.564021505137658 >50 0.08762036240263597 2.7349017971590706 >100 0.07116731027625198 6.695291200904256 >500 0.013022559833016659 4.126116598815196 >1k 0.011388356080286526 9.84268463742581 >5k 4.0855089077261055E-4 1.12649991075226 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 8206 0.18830991507007122 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 6918 0.15875310656285066 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 6670 0.1530620440552492 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 5730 0.13149108132482426 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 5500 0.12621307980567775 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 5350 0.12277090490188654 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 5345 0.12265616573842683 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 5284 0.12125634794421841 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 4964 0.11391304148279716 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 4962 0.11386714581741327 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 4941 0.1133852413308825 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 4730 0.10854324863288287 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 4475 0.1026915512964378 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.179133076776564E-5 2 0.0 0.0 0.0 2.294783269194141E-5 9.179133076776564E-5 3 0.0 0.0 0.0 2.294783269194141E-5 9.179133076776564E-5 4 0.0 0.0 0.0 2.294783269194141E-5 9.179133076776564E-5 5 0.0 0.0 0.0 2.294783269194141E-5 1.1473916345970705E-4 6 0.0 0.0 0.0 2.294783269194141E-5 2.0653049422747268E-4 7 0.0 0.0 0.0 4.589566538388282E-5 2.0653049422747268E-4 8 0.0 0.0 0.0 4.589566538388282E-5 2.294783269194141E-4 9 0.0 0.0 0.0 4.589566538388282E-5 2.294783269194141E-4 10 0.0 0.0 0.0 6.884349807582423E-5 2.9832182499523835E-4 11 0.0 0.0 0.0 6.884349807582423E-5 2.9832182499523835E-4 12 0.0 0.0 0.0 6.884349807582423E-5 7.343306461421251E-4 13 2.294783269194141E-5 0.0 0.0 6.884349807582423E-5 7.80226311526008E-4 14 2.294783269194141E-5 0.0 0.0 9.179133076776564E-5 7.80226311526008E-4 15 2.294783269194141E-5 0.0 0.0 1.1473916345970705E-4 0.0011014959692131876 16 2.294783269194141E-5 0.0 0.0 2.294783269194141E-4 0.001124443801905129 17 2.294783269194141E-5 0.0 0.0 2.753739923032969E-4 0.0011703394672890118 18 2.294783269194141E-5 0.0 0.0 3.2126965768717973E-4 0.0012391829653648362 19 2.294783269194141E-5 0.0 0.0 3.2126965768717973E-4 0.0012391829653648362 20 2.294783269194141E-5 0.0 0.0 4.1306098845494537E-4 0.0013309742961326017 21 2.294783269194141E-5 0.0 0.0 5.966436499904767E-4 0.0014227656269003674 22 2.294783269194141E-5 0.0 0.0 7.343306461421251E-4 0.0014457134595923088 23 2.294783269194141E-5 0.0 0.0 0.0011932872999809534 0.001514556957668133 24 2.294783269194141E-5 0.0 0.0 0.00162929612112784 0.001514556957668133 25 6.884349807582423E-5 0.0 0.0 0.0018587744480472541 0.001514556957668133 26 6.884349807582423E-5 0.0 0.0 0.0024554180980377307 0.0015834004557439573 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 1215 0.0 19.225517 28 CTAGCGG 1235 0.0 19.044596 29 TAGCGGC 1290 0.0 17.984554 30 AGCGGCG 1450 0.0 16.110397 31 CAAGACG 1675 0.0 15.6621275 4 GTATCAA 7130 0.0 15.611534 1 AAGACGG 1695 0.0 15.571877 5 GTATTAG 1065 0.0 15.489517 1 GCGCAAG 1655 0.0 15.386839 1 CGCAAGA 1670 0.0 15.239355 2 TATACTG 570 0.0 15.154639 5 CATCGTT 1110 0.0 15.13449 28 GTATAGG 365 0.0 14.918883 1 CGCTTCG 1130 0.0 14.867305 32 ATCGTTT 1120 0.0 14.85719 29 CGGTCCA 1695 0.0 14.725543 10 CTATTCC 1560 0.0 14.663348 4 TCGTTTA 1125 0.0 14.648936 30 GTCCTAT 1695 0.0 14.551283 1 GCGGCGC 1565 0.0 14.517618 32 >>END_MODULE