##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062773_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1543928 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.16516767621288 32.0 32.0 32.0 32.0 32.0 2 31.32484416371748 32.0 32.0 32.0 32.0 32.0 3 31.405480695991006 32.0 32.0 32.0 32.0 32.0 4 31.50381429703976 32.0 32.0 32.0 32.0 32.0 5 31.431314154546065 32.0 32.0 32.0 32.0 32.0 6 34.955606738138044 36.0 36.0 36.0 36.0 36.0 7 34.98778569985129 36.0 36.0 36.0 36.0 36.0 8 34.92346469524485 36.0 36.0 36.0 36.0 36.0 9 35.027462420527385 36.0 36.0 36.0 36.0 36.0 10 34.888818001875734 36.0 36.0 36.0 32.0 36.0 11 35.048401868480916 36.0 36.0 36.0 36.0 36.0 12 34.955287422729555 36.0 36.0 36.0 36.0 36.0 13 35.002157484027755 36.0 36.0 36.0 36.0 36.0 14 34.945000025907945 36.0 36.0 36.0 32.0 36.0 15 34.925596271328715 36.0 36.0 36.0 32.0 36.0 16 34.9218435056557 36.0 36.0 36.0 36.0 36.0 17 34.89596146970584 36.0 36.0 36.0 32.0 36.0 18 34.89064451192024 36.0 36.0 36.0 32.0 36.0 19 34.884604074801416 36.0 36.0 36.0 32.0 36.0 20 34.86280189231622 36.0 36.0 36.0 32.0 36.0 21 34.84291106839179 36.0 36.0 36.0 32.0 36.0 22 34.827031441880706 36.0 36.0 36.0 32.0 36.0 23 34.76678640454736 36.0 36.0 36.0 32.0 36.0 24 34.747950681638 36.0 36.0 36.0 32.0 36.0 25 34.72938440134514 36.0 36.0 36.0 32.0 36.0 26 34.66146284023608 36.0 36.0 36.0 32.0 36.0 27 34.63571876408744 36.0 36.0 36.0 32.0 36.0 28 34.597246115103815 36.0 36.0 36.0 32.0 36.0 29 34.56669028607551 36.0 36.0 36.0 32.0 36.0 30 34.535594924115635 36.0 36.0 36.0 32.0 36.0 31 34.52932261089895 36.0 36.0 36.0 32.0 36.0 32 34.49613000088087 36.0 36.0 36.0 32.0 36.0 33 34.448546823427 36.0 36.0 36.0 32.0 36.0 34 34.429904762398245 36.0 36.0 36.0 32.0 36.0 35 34.383407127793525 36.0 36.0 36.0 32.0 36.0 36 34.35086480716717 36.0 36.0 36.0 32.0 36.0 37 34.32224494924634 36.0 36.0 36.0 32.0 36.0 38 33.89610655419165 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 7.0 21 29.0 22 100.0 23 374.0 24 989.0 25 2442.0 26 5275.0 27 10330.0 28 18274.0 29 28798.0 30 43273.0 31 62471.0 32 88061.0 33 140195.0 34 338804.0 35 804502.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.97124186732238 18.459850288773215 12.23127508466276 26.337632759241647 2 15.311530071350477 20.776551756299515 37.22809612883503 26.683822043514983 3 18.003559751491004 24.717927260856722 29.00413749863983 28.274375489012442 4 11.901339894956173 16.272854869433594 36.205727343326465 35.62007789228377 5 13.753046614250545 37.33518488892285 33.479497411470874 15.432271085355719 6 33.98101076022377 35.9252736690271 16.661085660138074 13.432629910611057 7 29.634852019726388 31.091985216869766 20.956110477083687 18.317052286320166 8 28.105038299261476 33.34963410700475 19.438057275952882 19.107270317780884 9 27.35855106126782 14.253744346155514 18.717552940322996 39.670151652253665 10 15.633608413956503 27.050652531136834 31.79976047842136 25.515978576485303 11 37.187452634524426 21.261382288129774 22.280914028989937 19.27025104835586 12 24.56945771329566 24.120796023122885 28.87225739592273 22.43748886765873 13 29.662839840018133 19.526855255274704 25.484981459591626 25.325323445115533 14 23.432180775269313 20.108515422998998 25.38376141892627 31.075542382805416 15 25.091195962506024 27.53386168266914 23.008067733728517 24.366874621096322 16 25.35942437692974 25.96003567526185 24.500769790281534 24.179770157526878 17 23.499282349954143 26.177516049971246 25.960731329440236 24.362470270634383 18 24.6655284443316 24.447124477307234 27.528615324030653 23.358731754330513 19 25.053046515122467 25.68707867206243 26.05982921483385 23.20004559798125 20 25.271126632848162 24.264279163277045 26.4158691337938 24.04872507008099 21 26.29570736920511 24.594977087617597 24.837152063733665 24.272163479443627 22 24.999303723556878 25.065887182489842 25.519665113700324 24.41514398025295 23 23.472852290656792 24.638842326435757 26.283418095709376 25.604887287198075 24 24.12042530480696 25.72386795239156 25.905158789788125 24.250547953013353 25 24.62142016985248 24.7367105201797 25.915781046784563 24.726088263183257 26 23.739837609007676 25.54536221896358 26.596706582172224 24.11809358985652 27 24.8633030339537 25.407111480731587 25.646760272189212 24.0828252131255 28 23.754281287728443 24.829201879880408 26.572417884771827 24.84409894761932 29 23.778634754988577 25.307656833738363 26.602017710670445 24.31169070060262 30 24.14005057230648 25.1815499168355 26.792376328429825 23.886023182428197 31 24.278787611857545 25.10661118912281 25.64083299221207 24.97376820680757 32 23.72150773870284 25.545880377841453 25.740449036483565 24.99216284697214 33 23.56029555782394 25.07331948121933 26.30310480799623 25.0632801529605 34 24.04548657709427 25.332787539315305 26.71976931566757 23.901956567922856 35 25.21918120534118 25.189127990424424 26.106463513842616 23.48522729039178 36 23.917242254820174 25.779310952324202 25.950562461461935 24.352884331393692 37 24.967355990693864 25.626842702509446 25.62781425040546 23.777987056391233 38 24.08305309574022 25.493999720194203 25.897580716199204 24.525366467866377 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 75.0 1 117.0 2 159.0 3 159.0 4 643.0 5 1127.0 6 1127.0 7 1523.0 8 1919.0 9 2067.5 10 2216.0 11 2216.0 12 2708.5 13 3201.0 14 4058.0 15 4915.0 16 4915.0 17 7305.5 18 9696.0 19 9696.0 20 11133.5 21 12571.0 22 13135.5 23 13700.0 24 13700.0 25 15854.0 26 18008.0 27 18008.0 28 23477.0 29 28946.0 30 35001.5 31 41057.0 32 41057.0 33 50991.5 34 60926.0 35 60926.0 36 66290.0 37 71654.0 38 80498.5 39 89343.0 40 89343.0 41 93825.5 42 98308.0 43 109099.0 44 119890.0 45 119890.0 46 130187.5 47 140485.0 48 140485.0 49 142635.5 50 144786.0 51 140768.0 52 136750.0 53 136750.0 54 129653.5 55 122557.0 56 122557.0 57 118193.0 58 113829.0 59 101757.5 60 89686.0 61 89686.0 62 84889.5 63 80093.0 64 65961.0 65 51829.0 66 51829.0 67 43069.5 68 34310.0 69 34310.0 70 27642.0 71 20974.0 72 16495.0 73 12016.0 74 12016.0 75 9046.0 76 6076.0 77 6076.0 78 5842.0 79 5608.0 80 4345.5 81 3083.0 82 3083.0 83 2926.5 84 2770.0 85 2770.0 86 1758.5 87 747.0 88 606.5 89 466.0 90 466.0 91 277.0 92 88.0 93 64.5 94 41.0 95 41.0 96 26.5 97 12.0 98 12.0 99 11.5 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.010104098118565115 2 0.0 3 0.0 4 6.476985973439175E-5 5 6.476985973439175E-5 6 6.476985973439175E-5 7 3.886191584063506E-4 8 0.00220217523096932 9 0.004339580602204248 10 0.00110108761548466 11 0.005311128498220124 12 1.943095792031753E-4 13 1.943095792031753E-4 14 0.0 15 0.0 16 6.476985973439175E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 1.943095792031753E-4 22 6.476985973439175E-5 23 2.59079438937567E-4 24 0.0 25 0.0 26 0.0 27 1.295397194687835E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1543928.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.09516909038582 #Duplication Level Percentage of deduplicated Percentage of total 1 77.29386178939814 38.72049075988811 2 13.495903230802023 13.521591087490231 3 4.112529025848697 6.180535108170305 4 1.6978871140780518 3.402237683045088 5 0.890541058966773 2.230590246543587 6 0.5416468703937053 1.6280334935790581 7 0.3504621584410646 1.2289522760820704 8 0.251269036905654 1.0069891912773705 9 0.17727801637019758 0.799269498546591 >10 0.9795033890314605 8.881546215031861 >50 0.09081074049149067 3.223119718219035 >100 0.10101655278584248 10.699056865294326 >500 0.012610741347578348 4.240129043159871 >1k 0.004550267496548889 3.8268296205672505 >5k 1.3000764275853966E-4 0.4106291931053373 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 6305 0.40837396562534 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 4640 0.30053214916757776 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 4571 0.29606302884590474 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 4279 0.2771502298034623 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2681 0.1736479939479043 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1977 0.1280500126948925 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 1904 0.12332181293428192 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1893 0.12260934447720359 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1867 0.12092532812410942 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1708 0.11062692042634113 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1701 0.11017353140820038 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1682 0.10894290407324693 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1659 0.10745319729935593 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 6.476985973439175E-5 0.0 6 0.0 0.0 0.0 6.476985973439175E-5 6.476985973439175E-5 7 0.0 0.0 0.0 6.476985973439175E-5 6.476985973439175E-5 8 0.0 0.0 0.0 6.476985973439175E-5 6.476985973439175E-5 9 0.0 0.0 0.0 6.476985973439175E-5 6.476985973439175E-5 10 0.0 0.0 0.0 6.476985973439175E-5 1.943095792031753E-4 11 0.0 0.0 0.0 1.943095792031753E-4 1.943095792031753E-4 12 0.0 0.0 0.0 1.943095792031753E-4 5.18158877875134E-4 13 0.0 0.0 0.0 1.943095792031753E-4 9.067780362814847E-4 14 0.0 0.0 0.0 2.59079438937567E-4 9.067780362814847E-4 15 0.0 0.0 0.0 2.59079438937567E-4 0.001036317755750268 16 0.0 0.0 0.0 3.2384929867195877E-4 0.00110108761548466 17 0.0 0.0 0.0 3.2384929867195877E-4 0.0011658574752190516 18 0.0 0.0 0.0 4.5338901814074233E-4 0.0012306273349534434 19 0.0 0.0 0.0 4.5338901814074233E-4 0.0012306273349534434 20 0.0 0.0 0.0 5.829287376095258E-4 0.0014897067738910104 21 0.0 0.0 0.0 8.420081765470929E-4 0.001619246493359794 22 0.0 0.0 0.0 9.067780362814847E-4 0.0016840163530941858 23 0.0 0.0 0.0 0.0014897067738910104 0.0016840163530941858 24 0.0 0.0 0.0 0.00220217523096932 0.0017487862128285775 25 0.0 0.0 0.0 0.002396484810172495 0.0017487862128285775 26 0.0 0.0 0.0 0.003756651864594722 0.0019430957920317528 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGCGG 370 0.0 20.323233 29 TAGCGGC 390 0.0 19.281017 30 TCTAGCG 395 0.0 19.036953 28 GATATAC 230 0.0 18.088331 1 TACCGTC 415 0.0 17.352402 7 AAGACGG 500 0.0 17.282991 5 CGTCGTA 400 0.0 17.201305 10 ACCGTCG 405 0.0 16.990595 8 CAAGACG 505 0.0 16.79281 4 CCGTCGT 410 0.0 16.783392 9 ATACCGT 410 0.0 16.783392 6 AACGAAT 135 4.4383341E-10 16.591703 31 GTTTTCG 460 0.0 16.346949 28 GCGCAAG 495 0.0 16.162844 1 TCGCGTA 180 0.0 16.002771 9 GTACCGG 200 0.0 16.00277 6 GACGGAC 540 0.0 16.00277 7 TACCGGC 150 1.1459633E-10 16.00277 7 GTATAGG 200 0.0 16.001215 1 CGCAAGA 520 0.0 15.999141 2 >>END_MODULE