##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062762_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2218382 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.140686770808635 32.0 32.0 32.0 32.0 32.0 2 31.19671003461081 32.0 32.0 32.0 32.0 32.0 3 31.312276695357248 32.0 32.0 32.0 32.0 32.0 4 31.431772345790762 32.0 32.0 32.0 32.0 32.0 5 31.333521458432315 32.0 32.0 32.0 32.0 32.0 6 34.84611577266674 36.0 36.0 36.0 32.0 36.0 7 34.87268558796456 36.0 36.0 36.0 32.0 36.0 8 34.81583108770266 36.0 36.0 36.0 32.0 36.0 9 34.94636225861912 36.0 36.0 36.0 32.0 36.0 10 34.7616100383072 36.0 36.0 36.0 32.0 36.0 11 34.96162202902836 36.0 36.0 36.0 36.0 36.0 12 34.84851932624769 36.0 36.0 36.0 32.0 36.0 13 34.91764357987037 36.0 36.0 36.0 32.0 36.0 14 34.854837895366984 36.0 36.0 36.0 32.0 36.0 15 34.820545334392364 36.0 36.0 36.0 32.0 36.0 16 34.83538317566587 36.0 36.0 36.0 32.0 36.0 17 34.80122314371465 36.0 36.0 36.0 32.0 36.0 18 34.80259035639489 36.0 36.0 36.0 32.0 36.0 19 34.79774853925068 36.0 36.0 36.0 32.0 36.0 20 34.78013840718145 36.0 36.0 36.0 32.0 36.0 21 34.772476516668455 36.0 36.0 36.0 32.0 36.0 22 34.75730960673139 36.0 36.0 36.0 32.0 36.0 23 34.69240329212913 36.0 36.0 36.0 32.0 36.0 24 34.66313511379014 36.0 36.0 36.0 32.0 36.0 25 34.64851815422231 36.0 36.0 36.0 32.0 36.0 26 34.583372025196745 36.0 36.0 36.0 32.0 36.0 27 34.55809188859268 36.0 36.0 36.0 32.0 36.0 28 34.532204101908505 36.0 36.0 36.0 32.0 36.0 29 34.497223201414364 36.0 36.0 36.0 32.0 36.0 30 34.47736773919009 36.0 36.0 36.0 32.0 36.0 31 34.47206161968498 36.0 36.0 36.0 32.0 36.0 32 34.44479264617185 36.0 36.0 36.0 32.0 36.0 33 34.41015343615302 36.0 36.0 36.0 32.0 36.0 34 34.39633706007351 36.0 36.0 36.0 32.0 36.0 35 34.36084632854035 36.0 36.0 36.0 32.0 36.0 36 34.33553012961699 36.0 36.0 36.0 32.0 36.0 37 34.3284758891841 36.0 36.0 36.0 32.0 36.0 38 33.87128366530201 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 19.0 21 47.0 22 182.0 23 550.0 24 1511.0 25 3622.0 26 7985.0 27 15423.0 28 26928.0 29 42724.0 30 65197.0 31 95010.0 32 137594.0 33 220489.0 34 524410.0 35 1076690.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.268160680917056 18.75010425189964 12.407351055029224 26.574384012154077 2 15.623008120332745 20.920698058314574 36.59671778800946 26.85957603334322 3 17.245001086377368 25.263547937190257 28.972467320777035 28.51898365565534 4 11.91676444827507 16.59896708362277 36.337388696881824 35.146879771220334 5 14.240076091562312 37.02431504070538 33.18782174379502 15.547787123937287 6 33.89347181276427 36.24216770796708 16.72774727503854 13.136613204230112 7 29.97486445014632 30.714686265423474 21.28763796153215 18.022811322898054 8 28.22632449442984 32.52522046920734 19.460749200865333 19.787705835497494 9 27.626716290207554 14.13720945119285 18.48463374238494 39.75144051621465 10 15.770604794994489 26.404249996055633 31.36238338769043 26.462761821259445 11 37.27788484295229 21.145078946478684 22.43477476868287 19.14226144188615 12 24.9174735245871 23.84948649441777 28.321129978240865 22.91191000275426 13 29.209120713818514 19.257349623306027 25.422797457062117 26.110732205813342 14 23.85644131623859 19.768056177880997 24.937905193965694 31.437597311914722 15 25.290459442963385 26.798901181131114 22.274522602509396 25.636116773396108 16 26.15619228617627 25.506394077482632 23.309386439930744 25.028027196410356 17 24.204668086921007 25.75241775311917 25.03410143068236 25.008812729277462 18 25.313945028403584 24.376505038356786 25.993539435498487 24.316010497741146 19 25.73898453918216 24.99501889214752 25.20449588934638 24.061500679323938 20 25.76562557756058 23.992441337875984 24.845720890270474 25.396212194292957 21 27.19273848156695 24.09146498411678 24.161696445918395 24.554100088397877 22 25.854924895712276 24.14164918395479 24.698406315954603 25.305019604378327 23 24.329250014086888 23.741883135177776 25.46841719727278 26.460449653462558 24 24.960985078313836 25.09513690608741 24.793791150487156 25.150086865111597 25 25.13260796950569 24.161990208174338 25.02793704057148 25.677464781748494 26 24.963216401157602 25.015551889216454 25.43328915695237 24.58794255267357 27 25.72670146683616 24.592315112830082 24.34222270305358 25.338760717280177 28 24.647287978355394 24.338143746207823 25.62881415373908 25.38575412169771 29 24.872091461254193 24.498666144965114 25.544698793985887 25.084543599794806 30 24.812002621730613 24.52399992426913 25.83928286471852 24.824714589281736 31 25.262691457107028 24.40999791740106 24.6465216540704 25.680788971421514 32 24.847208460941353 24.64593564138187 24.4864951122034 26.02036078547338 33 24.466435447096128 24.227702893370033 25.209454458249304 26.09640720128454 34 25.307318577233318 24.261826863001954 25.478434282283214 24.952420277481515 35 26.253323368112436 24.127224256237202 25.10374678481885 24.515705590831516 36 24.969820346540857 24.850544225476046 24.678887585636737 25.50074784234636 37 26.068909682822888 24.683440453447602 24.568536888597183 24.679112975132327 38 24.947878655650225 24.468970839544696 25.18192321337047 25.40122729143461 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 249.0 1 221.0 2 193.0 3 193.0 4 716.5 5 1240.0 6 1240.0 7 1413.0 8 1586.0 9 1620.0 10 1654.0 11 1654.0 12 2179.5 13 2705.0 14 3735.5 15 4766.0 16 4766.0 17 7109.5 18 9453.0 19 9453.0 20 11298.0 21 13143.0 22 14958.0 23 16773.0 24 16773.0 25 19395.5 26 22018.0 27 22018.0 28 28221.5 29 34425.0 30 41805.0 31 49185.0 32 49185.0 33 63271.0 34 77357.0 35 77357.0 36 85084.0 37 92811.0 38 105211.0 39 117611.0 40 117611.0 41 125679.0 42 133747.0 43 152979.5 44 172212.0 45 172212.0 46 176972.0 47 181732.0 48 181732.0 49 194921.5 50 208111.0 51 208018.5 52 207926.0 53 207926.0 54 198909.5 55 189893.0 56 189893.0 57 185197.5 58 180502.0 59 162778.0 60 145054.0 61 145054.0 62 138305.5 63 131557.0 64 108221.5 65 84886.0 66 84886.0 67 70206.0 68 55526.0 69 55526.0 70 44580.0 71 33634.0 72 26276.5 73 18919.0 74 18919.0 75 14028.5 76 9138.0 77 9138.0 78 9096.0 79 9054.0 80 6959.0 81 4864.0 82 4864.0 83 4587.0 84 4310.0 85 4310.0 86 2704.5 87 1099.0 88 934.5 89 770.0 90 770.0 91 454.0 92 138.0 93 107.0 94 76.0 95 76.0 96 56.5 97 37.0 98 37.0 99 32.5 100 28.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008880346126140583 2 0.0 3 0.0 4 1.3523369735239467E-4 5 9.015579823492978E-5 6 9.015579823492978E-5 7 4.507789911746489E-4 8 0.00202850546028592 9 0.0036062319293971913 10 0.001217103276171552 11 0.004823335205568743 12 1.3523369735239467E-4 13 1.3523369735239467E-4 14 0.0 15 0.0 16 4.507789911746489E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 1.3523369735239467E-4 22 0.0 23 3.1554529382225426E-4 24 0.0 25 4.507789911746489E-5 26 9.015579823492978E-5 27 9.015579823492978E-5 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 4.507789911746489E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2218382.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.545260914109704 #Duplication Level Percentage of deduplicated Percentage of total 1 71.90403842637203 31.3108011405454 2 15.443623039561505 13.449931894337237 3 5.469473016471782 7.145088886948393 4 2.41264594852232 4.202371892870965 5 1.3070718524829261 2.845839242492886 6 0.7929053017810035 2.0716360947740817 7 0.5239125109651896 1.5969734890301883 8 0.3464424332664677 1.2068740918645902 9 0.2708962331831374 1.06166224391483 >10 1.29821044048666 10.064571549252104 >50 0.1010535131191543 3.0997251390969587 >100 0.10218402131309152 9.712628238907204 >500 0.017773199559250698 5.193580682777387 >1k 0.009666126076083711 6.797262954242135 >5k 1.0393683952778184E-4 0.24105245894565072 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5326 0.24008489069961803 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3808 0.1716566398393063 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 3017 0.13600002163739158 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 3004 0.13541400894886454 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2906 0.13099637483535298 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2828 0.12748029870419073 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 2667 0.12022275694627887 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2635 0.11878026417451999 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2507 0.11301029308748449 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2415 0.10886312636867772 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2387 0.1076009451933887 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2358 0.10629368611898221 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 2306 0.10394963536487403 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGT 2301 0.10372424586928672 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 9.015579823492978E-5 7 0.0 0.0 0.0 0.0 9.015579823492978E-5 8 0.0 0.0 0.0 0.0 9.015579823492978E-5 9 0.0 0.0 0.0 0.0 9.015579823492978E-5 10 0.0 0.0 0.0 0.0 1.3523369735239467E-4 11 0.0 0.0 0.0 0.0 1.3523369735239467E-4 12 0.0 0.0 0.0 0.0 2.7046739470478934E-4 13 0.0 0.0 0.0 0.0 3.606231929397191E-4 14 0.0 0.0 0.0 0.0 3.606231929397191E-4 15 0.0 0.0 0.0 0.0 5.860126885270436E-4 16 0.0 0.0 0.0 4.507789911746489E-5 6.761684867619734E-4 17 0.0 0.0 0.0 9.015579823492978E-5 6.761684867619734E-4 18 0.0 0.0 0.0 2.7046739470478934E-4 6.761684867619734E-4 19 0.0 0.0 0.0 3.606231929397191E-4 6.761684867619734E-4 20 0.0 0.0 0.0 4.507789911746489E-4 6.761684867619734E-4 21 0.0 0.0 0.0 5.409347894095787E-4 6.761684867619734E-4 22 0.0 0.0 0.0 0.0010818695788191574 8.114021841143681E-4 23 0.0 0.0 0.0 0.0018031159646985956 8.114021841143681E-4 24 0.0 0.0 0.0 0.002884985543517753 8.114021841143681E-4 25 0.0 0.0 0.0 0.003335764534692402 8.114021841143681E-4 26 0.0 0.0 0.0 0.004643023609098884 8.56480083231833E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACCGT 540 0.0 19.555859 6 ACCGTCG 540 0.0 18.963257 8 TACCGTC 550 0.0 18.909384 7 CGTCGTA 595 0.0 17.747776 10 CCGTCGT 615 0.0 17.17061 9 GTCGTAG 640 0.0 16.249886 11 AGATACC 675 0.0 15.407646 4 CTAGCGG 640 0.0 15.249893 29 TCTAGCG 650 0.0 15.015279 28 TCAGATA 730 0.0 14.90434 2 GTATTAC 215 0.0 14.884623 1 TAAGGCG 65 0.0041627716 14.769461 4 CAGATAC 740 0.0 14.70293 3 AACCGCG 465 0.0 14.451837 7 GCATTCG 760 0.0 14.315689 22 GTTATAT 305 0.0 14.164792 1 TAGCGGC 705 0.0 14.070823 30 TTACACA 495 0.0 13.899205 4 ATCACGA 645 0.0 13.891375 25 GCTCGTA 810 0.0 13.827063 26 >>END_MODULE