FastQCFastQC Report
Thu 2 Feb 2017
SRR4062756_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4062756_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences697916
Sequences flagged as poor quality0
Sequence length38
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAGTAC350.002064871422.8587823
CCGTGTG350.002066592522.85550732
GTATCAA9200.020.5261521
TAGGCGC400.004476171520.0043016
GATCGAA400.004483603419.99856822
GGTATCA3200.019.5041921
CTACTCT852.3908433E-718.8248774
TATTGAG701.7823204E-518.2896465
TAGGACC2650.018.1145064
GATATAC1600.018.003871
TACCGGA450.00883594117.7815997
TTTCCGT1800.017.77650524
CTTAGAC652.097765E-417.2320043
TCGCCCA652.1000636E-417.22953626
GTAGGAC4950.016.486033
GTCCTAA2700.016.003441
GGACCGC703.6877563E-416.003446
CAGATCG703.689769E-416.0022939
TAAAGGT703.691783E-416.0011464
TCAATGC600.002439448616.0011463
Produced by FastQC (version 0.11.5)