Basic Statistics
Measure | Value |
---|---|
Filename | SRR4062755_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1102161 |
Sequences flagged as poor quality | 0 |
Sequence length | 38 |
%GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT | 2780 | 0.25223175198541775 | No Hit |
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA | 2387 | 0.21657452949251518 | No Hit |
TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC | 1889 | 0.17139056816563097 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT | 1677 | 0.1521556288055919 | No Hit |
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG | 1150 | 0.10434047294360804 | No Hit |
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA | 1126 | 0.10216293263869798 | No Hit |
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA | 1120 | 0.10161854756247045 | No Hit |
GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG | 1103 | 0.10007612317982581 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATACC | 80 | 5.2623363E-9 | 21.996227 | 3 |
TAGACCG | 110 | 2.3646862E-11 | 20.359219 | 5 |
GACCGGT | 145 | 0.0 | 19.861364 | 7 |
CTAGACC | 155 | 0.0 | 18.576614 | 4 |
AGACCGG | 130 | 1.2732926E-11 | 18.457533 | 6 |
AATAGCG | 140 | 1.8189894E-12 | 18.281748 | 5 |
TTAATAC | 75 | 3.2382588E-5 | 17.06374 | 3 |
TAGCGTA | 135 | 4.4383341E-10 | 16.592005 | 7 |
ACCGGTC | 155 | 1.0913936E-11 | 16.515543 | 8 |
GTGTAGG | 165 | 1.8189894E-12 | 16.496988 | 1 |
GTCCTAG | 245 | 0.0 | 16.338554 | 1 |
ATAGCGT | 160 | 1.8189894E-11 | 15.99653 | 6 |
TTCGTTC | 295 | 0.0 | 15.728971 | 29 |
TTTCGTT | 280 | 0.0 | 15.428024 | 28 |
TCGTTCT | 270 | 0.0 | 15.407561 | 30 |
CTAGCGG | 270 | 0.0 | 15.407561 | 29 |
CGGTCCA | 385 | 0.0 | 15.376776 | 10 |
GTATAGG | 115 | 3.3165634E-7 | 15.315619 | 1 |
CTAGGAC | 200 | 0.0 | 15.197392 | 3 |
CGTTATT | 160 | 3.0377123E-10 | 15.001512 | 2 |