##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062754_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1638205 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2590426717047 32.0 32.0 32.0 32.0 32.0 2 30.918357592608984 32.0 32.0 32.0 32.0 32.0 3 30.963514944710827 32.0 32.0 32.0 32.0 32.0 4 31.02871801758632 32.0 32.0 32.0 32.0 32.0 5 30.956550004425576 32.0 32.0 32.0 32.0 32.0 6 34.60183249349135 36.0 36.0 36.0 32.0 36.0 7 34.53172160993282 36.0 36.0 36.0 32.0 36.0 8 34.52833802851291 36.0 36.0 36.0 32.0 36.0 9 34.63501637462955 36.0 36.0 36.0 32.0 36.0 10 34.39009220457757 36.0 36.0 36.0 32.0 36.0 11 34.63655525407382 36.0 36.0 36.0 32.0 36.0 12 34.473695904969155 36.0 36.0 36.0 32.0 36.0 13 34.54327144649174 36.0 36.0 36.0 32.0 36.0 14 34.44832850589517 36.0 36.0 36.0 32.0 36.0 15 34.400648270515596 36.0 36.0 36.0 32.0 36.0 16 34.41663528068831 36.0 36.0 36.0 32.0 36.0 17 34.35193580778962 36.0 36.0 36.0 32.0 36.0 18 34.36820300267671 36.0 36.0 36.0 32.0 36.0 19 34.351988304272055 36.0 36.0 36.0 32.0 36.0 20 34.3337982731099 36.0 36.0 36.0 32.0 36.0 21 34.303368015602445 36.0 36.0 36.0 32.0 36.0 22 34.28614489639575 36.0 36.0 36.0 32.0 36.0 23 34.234550010529816 36.0 36.0 36.0 32.0 36.0 24 34.214600736782025 36.0 36.0 36.0 32.0 36.0 25 34.1940740017275 36.0 36.0 36.0 32.0 36.0 26 34.146689822091865 36.0 36.0 36.0 32.0 36.0 27 34.153869021276336 36.0 36.0 36.0 32.0 36.0 28 34.12596897213719 36.0 36.0 36.0 32.0 36.0 29 34.10325813924387 36.0 36.0 36.0 32.0 36.0 30 34.067555647797434 36.0 36.0 36.0 32.0 36.0 31 34.092097142909466 36.0 36.0 36.0 32.0 36.0 32 34.04634096465339 36.0 36.0 36.0 32.0 36.0 33 33.997188996493115 36.0 36.0 36.0 32.0 36.0 34 34.00225429662344 36.0 36.0 36.0 32.0 36.0 35 33.951785643432906 36.0 36.0 36.0 32.0 36.0 36 33.91560091685717 36.0 36.0 36.0 32.0 36.0 37 33.91664779438471 36.0 36.0 36.0 32.0 36.0 38 33.315284106689944 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 5.0 10 10.0 11 10.0 12 9.0 13 14.0 14 158.0 15 338.0 16 553.0 17 636.0 18 860.0 19 1108.0 20 1503.0 21 1973.0 22 3062.0 23 4407.0 24 6615.0 25 9986.0 26 14572.0 27 20974.0 28 29954.0 29 40794.0 30 55668.0 31 76112.0 32 103510.0 33 156367.0 34 352453.0 35 756551.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.11060153987755 17.399895125024905 11.790245160533273 25.69925817456427 2 16.65347415122043 19.9953337584255 37.70005594603772 25.651136144316343 3 18.66517460044188 24.451998385833427 28.3740446411074 28.508782372617286 4 12.613153211997643 15.912535749059156 36.035478938195716 35.43883210074748 5 14.799185694098114 36.502879676231 33.27941252773615 15.41852210193474 6 33.62265512309555 35.54153066874049 17.379817714453495 13.45599649371047 7 30.23681407394069 30.51974569727232 21.05792620581673 18.185514022970263 8 28.171338856454998 32.294390686385825 19.79350557073478 19.7407648864244 9 27.963506354218616 14.61381770146923 18.590919440386813 38.831756503925334 10 15.984180207434864 26.41299816078735 31.47971463819153 26.12310699358626 11 37.03924589667583 21.303040439901743 22.483616004063038 19.174097659359386 12 25.41572277863544 23.69294780581514 28.488906225296383 22.40242319025303 13 29.562079891573106 19.590590792261153 25.078176034970117 25.769153281195628 14 24.135712253686386 20.022050555109907 25.13134487629834 30.71089231490537 15 25.44528920291218 26.766808400475757 22.645700483327758 25.142201913284307 16 25.91200213428798 25.618476487118265 23.844929570328024 24.624591808265723 17 24.11560603294639 25.57847891747407 25.330474340806642 24.975440708772904 18 24.964105193758698 24.59020096207848 26.379874490269334 24.065819353893488 19 25.652316178759843 24.92311148498919 25.57503085918566 23.849541477065305 20 25.850109241548047 24.10346538975028 25.169203833923543 24.877221534778126 21 27.357242580020525 24.101052981147188 24.264839195878668 24.276865242953622 22 25.86524549933154 24.3417638835473 24.816524122606207 24.976466494514955 23 24.379232919061273 24.148532343866563 25.3491643132644 26.123070423807764 24 24.776400056167088 25.148995402846207 25.152719524777623 24.92188501620909 25 24.950241770049818 24.42958142033799 25.209106671876526 25.411070137735663 26 24.632027918744537 25.294402086579364 25.714025798951827 24.35954419572427 27 25.43533097607908 24.745919573350005 24.81392668418328 25.004822766387637 28 24.422131780508664 24.741397676501236 25.61751701479672 25.218953528193378 29 24.51600338944145 24.86996559277375 25.626546066367606 24.98748495141719 30 24.467806513719857 25.003281094243402 25.93779777837872 24.591114613658018 31 25.20940175896867 24.876519959783142 24.567079681024396 25.34699860022379 32 24.569776485224974 25.097033029689236 24.636133769447813 25.697056715637977 33 24.378491530586892 24.504676537219694 25.35622692789262 25.76060500430079 34 25.085042112023597 24.711601624408125 25.587846731281576 24.6155095322867 35 25.773548343375424 24.7076356323404 25.278230752183077 24.240585272101097 36 24.627247473976617 25.292530297017613 24.928843981806526 25.15137824719924 37 25.507751571223185 25.073883355564984 24.87346273476776 24.544902338444068 38 24.540860024039794 25.12006163173937 25.33775060023185 25.001327743988984 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 528.0 1 430.5 2 333.0 3 333.0 4 772.0 5 1211.0 6 1211.0 7 1403.5 8 1596.0 9 1526.5 10 1457.0 11 1457.0 12 1844.0 13 2231.0 14 2910.0 15 3589.0 16 3589.0 17 5172.0 18 6755.0 19 6755.0 20 8218.0 21 9681.0 22 10368.5 23 11056.0 24 11056.0 25 13511.0 26 15966.0 27 15966.0 28 20952.5 29 25939.0 30 32117.5 31 38296.0 32 38296.0 33 47986.0 34 57676.0 35 57676.0 36 64302.0 37 70928.0 38 81097.5 39 91267.0 40 91267.0 41 97602.5 42 103938.0 43 116443.5 44 128949.0 45 128949.0 46 133656.0 47 138363.0 48 138363.0 49 145487.5 50 152612.0 51 152459.0 52 152306.0 53 152306.0 54 145164.5 55 138023.0 56 138023.0 57 133847.5 58 129672.0 59 116473.0 60 103274.0 61 103274.0 62 96952.0 63 90630.0 64 75159.5 65 59689.0 66 59689.0 67 49322.0 68 38955.0 69 38955.0 70 31454.0 71 23953.0 72 18892.0 73 13831.0 74 13831.0 75 10430.0 76 7029.0 77 7029.0 78 6824.0 79 6619.0 80 5188.5 81 3758.0 82 3758.0 83 3912.5 84 4067.0 85 4067.0 86 2695.5 87 1324.0 88 1142.0 89 960.0 90 960.0 91 696.5 92 433.0 93 383.0 94 333.0 95 333.0 96 303.5 97 274.0 98 274.0 99 489.0 100 704.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12031461264005422 2 0.05573173076629604 3 0.01269682365760085 4 0.0030521210715386657 5 0.0 6 3.6625452858463986E-4 7 0.0 8 6.104242143077332E-5 9 1.2208484286154665E-4 10 2.441696857230933E-4 11 0.0012818908500462397 12 0.0020754423286462927 13 0.014344969036231729 14 0.009217405636046772 15 0.023989671622293915 16 0.011475975228985382 17 0.02026608391501674 18 0.005188605821615732 19 0.0072640481502620246 20 0.005615902771631145 21 0.005737987614492691 22 0.007019878464538932 23 0.009217405636046772 24 0.014344969036231729 25 0.017397090107770394 26 0.018862108222108955 27 0.008606981421739037 28 0.004395054343015679 29 0.010804508593246876 30 0.0019533574857847464 31 0.005249648243046505 32 0.006287369407369651 33 0.008179684471723623 34 0.01178118733613925 35 0.016237284100585704 36 0.015565817464847196 37 0.009156363214615998 38 0.005371733085908052 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1638205.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.66769365751585 #Duplication Level Percentage of deduplicated Percentage of total 1 78.97083449864427 43.96124222748913 2 13.145621958168865 14.63572912209716 3 3.8855003047774783 6.488905220176114 4 1.5180866859292468 3.3803353831145113 5 0.7617287903055752 2.120184247442044 6 0.4139179378158548 1.3825114177010218 7 0.23992963413325155 0.9349430560602794 8 0.17648497560277035 0.7859609245607342 9 0.135892902720237 0.680836003097468 >10 0.5929257870630821 5.975354433832121 >50 0.06821528609433235 2.7015296001462636 >100 0.0764162907908192 9.461720101048044 >500 0.010034276823211325 3.80328896601781 >1k 0.004410671131081901 3.6874592972173645 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4381 0.26742684828821794 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2893 0.1765957251992272 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2019 0.12324464886873132 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1995 0.12177963075439276 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1830 0.11170763121831517 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1822 0.11121929184686899 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1770 0.10804508593246877 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1728 0.1054813042323763 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1705 0.10407732853946851 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1658 0.10120833473222215 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8312726429231996E-4 2 0.0 0.0 0.0 0.0 1.8312726429231996E-4 3 0.0 0.0 0.0 0.0 1.8312726429231996E-4 4 0.0 0.0 0.0 0.0 1.8312726429231996E-4 5 0.0 0.0 0.0 0.0 1.8312726429231996E-4 6 0.0 0.0 0.0 6.104242143077331E-5 1.8312726429231996E-4 7 0.0 0.0 0.0 6.104242143077331E-5 1.8312726429231996E-4 8 0.0 0.0 0.0 6.104242143077331E-5 1.8312726429231996E-4 9 0.0 0.0 0.0 1.2208484286154662E-4 1.8312726429231996E-4 10 0.0 0.0 0.0 1.2208484286154662E-4 1.8312726429231996E-4 11 0.0 0.0 0.0 1.2208484286154662E-4 1.8312726429231996E-4 12 0.0 0.0 0.0 1.2208484286154662E-4 3.662545285846399E-4 13 0.0 0.0 0.0 1.2208484286154662E-4 4.272969500154132E-4 14 0.0 0.0 0.0 1.2208484286154662E-4 4.272969500154132E-4 15 0.0 0.0 0.0 1.8312726429231996E-4 4.272969500154132E-4 16 0.0 0.0 0.0 1.8312726429231996E-4 4.272969500154132E-4 17 0.0 0.0 0.0 1.8312726429231996E-4 4.272969500154132E-4 18 0.0 0.0 0.0 2.4416968572309324E-4 5.493817928769599E-4 19 0.0 0.0 0.0 2.4416968572309324E-4 5.493817928769599E-4 20 0.0 0.0 0.0 3.052121071538666E-4 5.493817928769599E-4 21 0.0 0.0 0.0 8.545939000308264E-4 6.104242143077332E-4 22 0.0 0.0 0.0 9.76678742892373E-4 6.714666357385064E-4 23 0.0 0.0 0.0 0.001953357485784746 6.714666357385064E-4 24 0.0 0.0 0.0 0.003113163492969439 6.714666357385064E-4 25 0.0 6.104242143077331E-5 0.0 0.0041508846572925855 6.714666357385064E-4 26 0.0 6.104242143077331E-5 0.0 0.005310690664477279 8.545939000308264E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTTT 375 0.0 17.065395 29 CATCGTT 395 0.0 16.201324 28 TCGTTTA 395 0.0 16.20083 30 CGTAGTA 70 3.6816712E-4 16.009071 2 TAGGACG 180 0.0 15.996858 4 TAACGCT 70 3.7031324E-4 15.996857 4 CGTTTAT 405 0.0 15.800811 31 CTATACA 155 1.891749E-10 15.480828 4 TAAACGC 425 0.0 15.434146 28 CGCTTCG 390 0.0 15.177895 32 CCGATAA 180 7.2759576E-12 15.110909 9 TTAGTAC 75 6.246992E-4 14.933134 3 GTAAACG 420 0.0 14.855583 27 GTATAGG 120 5.341135E-7 14.685749 1 AAACGCT 420 0.0 14.475112 29 GGCATCG 470 0.0 14.296808 26 CCTATAC 135 1.3198587E-7 14.222033 3 AACGCTT 420 0.0 14.093759 30 TACCGTC 375 0.0 14.077662 7 CTCGTAC 80 0.0010183728 13.999813 3 >>END_MODULE