##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062754_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1638205 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.154364075314138 32.0 32.0 32.0 32.0 32.0 2 31.249468167903284 32.0 32.0 32.0 32.0 32.0 3 31.342801419846722 32.0 32.0 32.0 32.0 32.0 4 31.448782661510617 32.0 32.0 32.0 32.0 32.0 5 31.352591403395788 32.0 32.0 32.0 32.0 32.0 6 34.87949737670194 36.0 36.0 36.0 36.0 36.0 7 34.90812016811083 36.0 36.0 36.0 36.0 36.0 8 34.8498270973413 36.0 36.0 36.0 32.0 36.0 9 34.965028186338095 36.0 36.0 36.0 36.0 36.0 10 34.79366135495863 36.0 36.0 36.0 32.0 36.0 11 34.9806477211338 36.0 36.0 36.0 36.0 36.0 12 34.876039323527884 36.0 36.0 36.0 32.0 36.0 13 34.933062711931655 36.0 36.0 36.0 36.0 36.0 14 34.877624595212446 36.0 36.0 36.0 32.0 36.0 15 34.843544611327644 36.0 36.0 36.0 32.0 36.0 16 34.85268876605797 36.0 36.0 36.0 32.0 36.0 17 34.821609017186496 36.0 36.0 36.0 32.0 36.0 18 34.82127511514127 36.0 36.0 36.0 32.0 36.0 19 34.8118049938805 36.0 36.0 36.0 32.0 36.0 20 34.79651997155423 36.0 36.0 36.0 32.0 36.0 21 34.7876273116002 36.0 36.0 36.0 32.0 36.0 22 34.76969182733541 36.0 36.0 36.0 32.0 36.0 23 34.711683214249746 36.0 36.0 36.0 32.0 36.0 24 34.68480928821484 36.0 36.0 36.0 32.0 36.0 25 34.66554674170815 36.0 36.0 36.0 32.0 36.0 26 34.59864791036531 36.0 36.0 36.0 32.0 36.0 27 34.58227694336179 36.0 36.0 36.0 32.0 36.0 28 34.53927255746381 36.0 36.0 36.0 32.0 36.0 29 34.50991603614932 36.0 36.0 36.0 32.0 36.0 30 34.48375020220302 36.0 36.0 36.0 32.0 36.0 31 34.47789928610888 36.0 36.0 36.0 32.0 36.0 32 34.44669317942504 36.0 36.0 36.0 32.0 36.0 33 34.40136979193691 36.0 36.0 36.0 32.0 36.0 34 34.39028509862929 36.0 36.0 36.0 32.0 36.0 35 34.35589624009205 36.0 36.0 36.0 32.0 36.0 36 34.327129388568586 36.0 36.0 36.0 32.0 36.0 37 34.31762630440024 36.0 36.0 36.0 32.0 36.0 38 33.876461737084185 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 1.0 20 7.0 21 35.0 22 108.0 23 390.0 24 1121.0 25 2714.0 26 5924.0 27 11540.0 28 20060.0 29 31459.0 30 47962.0 31 69282.0 32 99108.0 33 158478.0 34 379318.0 35 810696.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.28224466348484 18.751762762399775 12.480174646257083 26.485817927858303 2 15.641265897735632 21.20467218693631 36.7659114701762 26.388150445151858 3 17.66439487121575 25.260696921325476 28.814342527339377 28.2605656801194 4 12.117858481432693 16.823077984277884 36.13840051471064 34.92066301957878 5 14.278999611159302 37.06079161129603 33.01452872446211 15.645680053082556 6 33.624343259046654 36.08575982341627 16.94966985166063 13.34022706587645 7 29.89703937067475 30.707075269854272 21.126310051465055 18.269575308005926 8 28.001428423179526 32.71467552207646 19.57104574006361 19.712850314680406 9 27.798983858079534 14.380672914745046 18.40299800324389 39.41734522393153 10 15.813906925382938 26.717519507798542 31.40744882617473 26.06112474064379 11 37.147503536029035 21.262629438197173 22.38256018879984 19.207306836973952 12 25.16219020876572 23.91911854474423 28.41344158222439 22.50524966426566 13 29.617391739607363 19.553132304116154 25.02894940370638 25.8005265525701 14 23.987413052700973 19.988462982349585 25.08581038392631 30.93831358102313 15 25.36538467407925 26.957920406786695 22.507195375426154 25.1694995437079 16 25.813130835273974 25.716500682149057 23.66895474009663 24.801413742480335 17 24.063777121910874 25.67383202956895 25.249404073360783 25.012986775159398 18 25.08153741442615 24.575373655922185 26.371363779258395 23.971725150393265 19 25.668032999533025 24.973553370915116 25.476115626554673 23.88229800299718 20 25.859339948297066 24.08868242985463 25.167485143800683 24.88449247804762 21 27.176518632329 24.20453900345562 24.335902615124763 24.28303974909062 22 25.736888850906936 24.38424983442243 24.90811589514133 24.9707454195293 23 24.3223825130341 23.975600093517105 25.49702326268478 26.204994130764014 24 24.800925403108888 25.10308538919122 25.195503615237406 24.90048559246248 25 25.00947684749692 24.344296769081733 25.27696506476914 25.36926131865221 26 24.718396049334483 25.153750598978757 25.723032221242153 24.404821130444603 27 25.561529577512935 24.540350286044962 24.840190843142857 25.057929293299246 28 24.42368323866671 24.67548322706865 25.741405990092815 25.15942754417182 29 24.539175500013734 24.719555855341667 25.691595374205306 25.049673270439293 30 24.536916930420798 24.804404821130444 26.00309485076654 24.655583397682218 31 25.22462085025989 24.68079391773313 24.680427663204544 25.414157568802437 32 24.677436584554435 24.969219358993534 24.69117112937636 25.662172927075673 33 24.366181277678923 24.46476478828962 25.46256420899704 25.706489725034416 34 25.081049075054707 24.57213840758635 25.673526817461795 24.673285699897143 35 25.85946203313993 24.48289438745456 25.33626743905677 24.321376140348736 36 24.79237946410858 25.06053882145397 25.0169545325524 25.130127181885054 37 25.633177776896055 24.91922561584173 24.867644769732724 24.57995183752949 38 24.71397012458163 24.788258842158147 25.40558160374508 25.092189429515145 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 298.0 1 261.5 2 225.0 3 225.0 4 644.5 5 1064.0 6 1064.0 7 1243.0 8 1422.0 9 1483.0 10 1544.0 11 1544.0 12 1979.0 13 2414.0 14 3014.5 15 3615.0 16 3615.0 17 5587.0 18 7559.0 19 7559.0 20 8805.5 21 10052.0 22 10756.0 23 11460.0 24 11460.0 25 13683.5 26 15907.0 27 15907.0 28 20808.0 29 25709.0 30 32050.0 31 38391.0 32 38391.0 33 48436.5 34 58482.0 35 58482.0 36 64991.5 37 71501.0 38 81276.0 39 91051.0 40 91051.0 41 97133.0 42 103215.0 43 115807.5 44 128400.0 45 128400.0 46 133507.5 47 138615.0 48 138615.0 49 146573.0 50 154531.0 51 153672.0 52 152813.0 53 152813.0 54 145291.5 55 137770.0 56 137770.0 57 133610.0 58 129450.0 59 116092.5 60 102735.0 61 102735.0 62 96877.5 63 91020.0 64 75069.5 65 59119.0 66 59119.0 67 49457.5 68 39796.0 69 39796.0 70 31801.5 71 23807.0 72 18772.0 73 13737.0 74 13737.0 75 10251.5 76 6766.0 77 6766.0 78 6825.5 79 6885.0 80 5271.5 81 3658.0 82 3658.0 83 3529.5 84 3401.0 85 3401.0 86 2181.0 87 961.0 88 799.5 89 638.0 90 638.0 91 382.0 92 126.0 93 77.0 94 28.0 95 28.0 96 24.0 97 20.0 98 20.0 99 20.0 100 20.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009217405636046772 2 0.0 3 0.0 4 1.8312726429231993E-4 5 1.2208484286154665E-4 6 1.2208484286154665E-4 7 3.6625452858463986E-4 8 0.002136484750077066 9 0.002930036228677119 10 8.545939000308265E-4 11 0.0041508846572925855 12 3.052121071538666E-4 13 1.2208484286154665E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 2.441696857230933E-4 22 0.0 23 1.2208484286154665E-4 24 0.0 25 1.2208484286154665E-4 26 0.0 27 6.104242143077332E-5 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 1.2208484286154665E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1638205.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.89375602572082 #Duplication Level Percentage of deduplicated Percentage of total 1 77.5104060087863 41.77326910892094 2 14.031037717998379 15.123706471229825 3 4.1764371162671186 6.752516490025953 4 1.6460347946772451 3.548439905367317 5 0.7928209996038869 2.136405076235999 6 0.45095870272050287 1.4582314981256608 7 0.2719604118092004 1.0259877657889727 8 0.18395866918678686 0.7931378908775183 9 0.13106131961394907 0.6357048105314871 >10 0.6381190233799654 6.208559136430333 >50 0.06876481102332822 2.6149865983987928 >100 0.08214786262640525 9.6725201490324 >500 0.011621268218961527 4.302345942289916 >1k 0.004671294088013947 3.954189156744883 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4985 0.30429647083240496 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3588 0.21902020809361467 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2127 0.12983723038325484 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2097 0.12800595774033163 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2033 0.12409924276876215 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1951 0.11909376421143875 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1896 0.1157364310327462 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1863 0.11372203112553068 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1759 0.10737361929673025 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1741 0.10627485571097633 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1720 0.1049929648609301 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1716 0.10474879517520701 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1685 0.10285648011085305 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1676 0.10230709831797608 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1658 0.10120833473222215 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.2208484286154662E-4 2 0.0 0.0 0.0 0.0 1.2208484286154662E-4 3 0.0 0.0 0.0 0.0 1.2208484286154662E-4 4 0.0 0.0 0.0 0.0 1.2208484286154662E-4 5 0.0 0.0 0.0 0.0 1.2208484286154662E-4 6 0.0 0.0 0.0 0.0 1.2208484286154662E-4 7 0.0 0.0 0.0 6.104242143077331E-5 1.2208484286154662E-4 8 0.0 0.0 0.0 6.104242143077331E-5 1.2208484286154662E-4 9 0.0 0.0 0.0 1.8312726429231996E-4 1.2208484286154662E-4 10 0.0 0.0 0.0 1.8312726429231996E-4 1.8312726429231996E-4 11 0.0 0.0 0.0 1.8312726429231996E-4 1.8312726429231996E-4 12 0.0 0.0 0.0 1.8312726429231996E-4 3.052121071538666E-4 13 0.0 0.0 0.0 1.8312726429231996E-4 3.052121071538666E-4 14 0.0 0.0 0.0 1.8312726429231996E-4 3.052121071538666E-4 15 0.0 0.0 0.0 1.8312726429231996E-4 5.493817928769599E-4 16 0.0 0.0 0.0 1.8312726429231996E-4 5.493817928769599E-4 17 0.0 0.0 0.0 1.8312726429231996E-4 5.493817928769599E-4 18 0.0 0.0 0.0 2.4416968572309324E-4 6.104242143077332E-4 19 0.0 0.0 0.0 2.4416968572309324E-4 6.104242143077332E-4 20 0.0 0.0 0.0 3.662545285846399E-4 6.104242143077332E-4 21 0.0 0.0 0.0 8.545939000308264E-4 6.104242143077332E-4 22 0.0 0.0 0.0 0.0010987635857539198 6.104242143077332E-4 23 0.0 0.0 0.0 0.0020754423286462927 6.104242143077332E-4 24 0.0 0.0 0.0 0.003113163492969439 6.104242143077332E-4 25 0.0 0.0 0.0 0.0040898422358618125 6.104242143077332E-4 26 0.0 0.0 0.0 0.005249648243046505 6.714666357385064E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 360 0.0 17.332623 28 CATCGTT 365 0.0 16.65685 28 CTAGCGG 375 0.0 16.639318 29 ACCGTCG 480 0.0 16.002275 8 GTATAAT 150 1.1459633E-10 15.999832 1 AAACGCT 370 0.0 15.999344 29 TAGCGGC 395 0.0 15.79682 30 TAAACGC 375 0.0 15.786019 28 TACCGTC 480 0.0 15.668895 7 ATACCGT 475 0.0 15.49694 6 CGTCGTA 480 0.0 15.334108 10 AACCGCG 305 0.0 15.215278 7 ATCGTTT 400 0.0 15.199377 29 CCGTCGT 485 0.0 15.176489 9 TAACGGC 75 6.2483037E-4 14.932721 28 AACGCTT 410 0.0 14.438432 30 TATAATG 200 3.6379788E-12 14.400289 2 TACACCG 90 1.5329609E-4 14.224243 5 CGCGGTC 315 0.0 14.222941 10 GTGTAAT 205 3.6379788E-12 14.048633 1 >>END_MODULE