##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062749_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5246024 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.23991312277641 32.0 32.0 32.0 32.0 32.0 2 30.797738820867004 32.0 32.0 32.0 32.0 32.0 3 30.84428378520571 32.0 32.0 32.0 32.0 32.0 4 30.929863645305474 32.0 32.0 32.0 32.0 32.0 5 30.803329912329794 32.0 32.0 32.0 32.0 32.0 6 34.46672508551238 36.0 36.0 36.0 32.0 36.0 7 34.405927994229536 36.0 36.0 36.0 32.0 36.0 8 34.39256091851657 36.0 36.0 36.0 32.0 36.0 9 34.55447077634414 36.0 36.0 36.0 32.0 36.0 10 34.23007462413439 36.0 36.0 36.0 32.0 36.0 11 34.524409533772626 36.0 36.0 36.0 32.0 36.0 12 34.332867138998985 36.0 36.0 36.0 32.0 36.0 13 34.421720525868736 36.0 36.0 36.0 32.0 36.0 14 34.31465086701853 36.0 36.0 36.0 32.0 36.0 15 34.24616585818136 36.0 36.0 36.0 32.0 36.0 16 34.270645159076665 36.0 36.0 36.0 32.0 36.0 17 34.191196037227435 36.0 36.0 36.0 32.0 36.0 18 34.2157443427632 36.0 36.0 36.0 32.0 36.0 19 34.2060884586117 36.0 36.0 36.0 32.0 36.0 20 34.1942213760364 36.0 36.0 36.0 32.0 36.0 21 34.1854261436852 36.0 36.0 36.0 32.0 36.0 22 34.15834658781584 36.0 36.0 36.0 32.0 36.0 23 34.09325729352363 36.0 36.0 36.0 32.0 36.0 24 34.07723239542938 36.0 36.0 36.0 32.0 36.0 25 34.05586516569501 36.0 36.0 36.0 32.0 36.0 26 33.9980082058336 36.0 36.0 36.0 32.0 36.0 27 34.001355502757896 36.0 36.0 36.0 32.0 36.0 28 33.988679998414035 36.0 36.0 36.0 32.0 36.0 29 33.95579109054781 36.0 36.0 36.0 32.0 36.0 30 33.928528348326275 36.0 36.0 36.0 32.0 36.0 31 33.955901841089556 36.0 36.0 36.0 32.0 36.0 32 33.90979225409567 36.0 36.0 36.0 32.0 36.0 33 33.8712485875017 36.0 36.0 36.0 32.0 36.0 34 33.88979844545126 36.0 36.0 36.0 32.0 36.0 35 33.84967167515818 36.0 36.0 36.0 32.0 36.0 36 33.80098527951836 36.0 36.0 36.0 32.0 36.0 37 33.8112665897068 36.0 36.0 36.0 32.0 36.0 38 33.20683073504811 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 3.0 7 5.0 8 12.0 9 14.0 10 43.0 11 43.0 12 24.0 13 25.0 14 397.0 15 891.0 16 1337.0 17 1695.0 18 2166.0 19 2882.0 20 4167.0 21 6234.0 22 9954.0 23 15509.0 24 24270.0 25 36731.0 26 54134.0 27 77713.0 28 108297.0 29 145931.0 30 196348.0 31 262715.0 32 355235.0 33 528208.0 34 1140484.0 35 2270557.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.13824793322813 17.287060851535202 11.58361789856118 25.991073316675482 2 16.991053325111853 19.383286125949972 37.17322531739821 26.452435231539962 3 18.668826031338114 23.87909718475532 28.21019298924575 29.241883794660815 4 12.761072541013293 15.36045567361691 35.839233223913716 36.03923856145608 5 15.13148840243278 35.992317214555655 33.32352906416185 15.552665318849701 6 34.53498286602906 35.13164573997272 16.859514781802783 13.473856612195437 7 30.802266783809372 29.988831539625348 21.079129847505435 18.129771829059845 8 28.42450869308625 32.27871554904224 19.413332957174294 19.883442800697214 9 27.488144341098337 14.68180246426909 18.49398915520305 39.33606403942952 10 16.0141356982041 25.93419111556995 31.034277676610923 27.01739550961502 11 37.60027541366855 21.084662443834997 22.347413526722733 18.967648615773722 12 25.52979409085866 23.16901980325229 28.05206574422035 23.249120361668698 13 29.09748953871196 19.117738176966732 25.465241108643927 26.319531175677387 14 24.045574508289288 19.701942441270376 24.525179751881783 31.727303298558553 15 25.47938654994978 26.677671794003537 21.938831931190116 25.90410972485656 16 26.57212048699461 25.3795887849327 22.95899001788016 25.089300710192532 17 24.624999356528924 25.560463306800717 24.71302619966364 25.101511137006717 18 25.628147313326764 24.354429038092597 25.477301217901598 24.54012243067904 19 25.961787937024045 24.760976822381945 24.88805424562697 24.38918099496704 20 26.00002783216594 24.080980927531712 24.30194163671055 25.617049603591795 21 27.30426480980507 23.953747233208475 23.9480663866022 24.79392157038426 22 26.162677203901442 23.84952337669369 24.417784481319003 25.570014938085865 23 24.59999306076369 23.588885326069757 25.206242109954868 26.604879503211688 24 25.21719402666382 24.83477620960439 24.410149257145907 25.537880506585886 25 25.289712940918086 24.128249261418837 24.65299649660108 25.929041301062 26 25.23845757429415 24.943265695759994 25.075256484049856 24.743020245896 27 25.89234548545646 24.411473479084588 24.05412350792804 25.642057527530916 28 24.98186617244798 24.209465200303256 25.146571843984837 25.66209678326392 29 25.00827851971489 24.5471406650611 25.079520495937185 25.365060319286826 30 24.966711953025207 24.639712292148673 25.321581119801323 25.0719946350248 31 25.680946907091702 24.438464955172893 24.054284358075456 25.82630377965995 32 25.135473534954706 24.43182706359564 24.014111437348184 26.41858796410147 33 24.764811696848245 24.13197462856376 24.817751464851195 26.2854622097368 34 25.74983475963365 24.12293921385049 24.902690725130206 25.224535301385654 35 26.40777013694399 23.99637002141001 24.800799205370232 24.795060636275764 36 25.18898895769149 24.773682243845897 24.237924381539212 25.799404416923405 37 26.284723287949095 24.385783871797333 24.350191506750445 24.97930133350313 38 25.182363824050007 24.20188363982275 24.88120258612062 25.734549950006624 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 103.0 1 210.0 2 317.0 3 317.0 4 724.0 5 1131.0 6 1131.0 7 1315.0 8 1499.0 9 1507.5 10 1516.0 11 1516.0 12 2257.0 13 2998.0 14 4283.5 15 5569.0 16 5569.0 17 8514.0 18 11459.0 19 11459.0 20 15601.0 21 19743.0 22 24318.0 23 28893.0 24 28893.0 25 36074.5 26 43256.0 27 43256.0 28 56520.0 29 69784.0 30 87019.0 31 104254.0 32 104254.0 33 137847.0 34 171440.0 35 171440.0 36 193148.5 37 214857.0 38 246657.0 39 278457.0 40 278457.0 41 301036.5 42 323616.0 43 369906.5 44 416197.0 45 416197.0 46 424834.5 47 433472.0 48 433472.0 49 467113.0 50 500754.0 51 506134.0 52 511514.0 53 511514.0 54 487390.5 55 463267.0 56 463267.0 57 448650.0 58 434033.0 59 391273.0 60 348513.0 61 348513.0 62 328692.5 63 308872.0 64 256189.5 65 203507.0 66 203507.0 67 169470.5 68 135434.0 69 135434.0 70 108785.0 71 82136.0 72 64011.5 73 45887.0 74 45887.0 75 34344.0 76 22801.0 77 22801.0 78 22324.5 79 21848.0 80 17259.0 81 12670.0 82 12670.0 83 12641.5 84 12613.0 85 12613.0 86 8437.5 87 4262.0 88 3724.5 89 3187.0 90 3187.0 91 2346.0 92 1505.0 93 1306.0 94 1107.0 95 1107.0 96 1029.0 97 951.0 98 951.0 99 1776.5 100 2602.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12298838129600627 2 0.054269671659908536 3 0.012466584216923138 4 0.003126177081919564 5 1.9062055377558318E-4 6 2.478067199082581E-4 7 1.9062055377558318E-5 8 3.049928860409331E-4 9 1.1437233226534991E-4 10 2.859308306633748E-4 11 0.001849019371623157 12 0.0022493225345518817 13 0.013972486591750247 14 0.008768545473676826 15 0.02279821823155975 16 0.010388820180769283 17 0.019691103205017744 18 0.005337375505716329 19 0.007682008317156003 20 0.005623306336379704 21 0.006233292108461569 22 0.007091084600451694 23 0.009340407135003576 24 0.013610307539576639 25 0.01585963007412852 26 0.018318635217833543 27 0.008882917805942176 28 0.00577580277940017 29 0.009931330851707885 30 0.002802122140501073 31 0.005985485388553312 32 0.006671719382145412 33 0.008387304366125661 34 0.012104405164749532 35 0.01551651307733247 36 0.014182169200903387 37 0.00985508263019765 38 0.006271416219216687 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 5246024.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.07187457107518 #Duplication Level Percentage of deduplicated Percentage of total 1 74.79607063879273 32.216069729633595 2 13.380079667237341 11.526102263564802 3 4.662353834650861 6.024489587161598 4 2.2192499294344348 3.823490184098697 5 1.2522523625757347 2.69684283460973 6 0.7659450266911523 1.9794412870788085 7 0.5181915708792456 1.5623637641289498 8 0.358801416054402 1.2363399670575492 9 0.2990424534769465 1.159228714282706 >10 1.5435932619250798 12.035389863589101 >50 0.10449023448781003 3.0981075218591627 >100 0.07344804462523327 6.60436723172704 >500 0.013752609409646316 4.2572566113765555 >1k 0.0120168406821106 9.988621287205104 >5k 7.121090774583219E-4 1.7918891526265857 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 6734 0.12836388091247772 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 6614 0.12607643426717072 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 6561 0.12506614533216012 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 6560 0.12504708327678257 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 6181 0.11782256428868795 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 6149 0.1172125785166061 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 6021 0.11477263542827865 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5983 0.11404827732393141 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 5727 0.10916839114727649 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 5594 0.10663313778206122 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 5525 0.1053178559610097 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 5374 0.1024394855989984 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 5292 0.10087639705803862 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.9062055377558318E-5 2 0.0 0.0 0.0 1.9062055377558318E-5 1.9062055377558318E-5 3 0.0 0.0 0.0 3.8124110755116636E-5 1.9062055377558318E-5 4 0.0 0.0 0.0 5.718616613267496E-5 1.9062055377558318E-5 5 0.0 1.9062055377558318E-5 0.0 5.718616613267496E-5 1.9062055377558318E-5 6 0.0 1.9062055377558318E-5 0.0 7.624822151023327E-5 3.8124110755116636E-5 7 0.0 1.9062055377558318E-5 0.0 7.624822151023327E-5 3.8124110755116636E-5 8 0.0 1.9062055377558318E-5 0.0 7.624822151023327E-5 5.718616613267496E-5 9 0.0 1.9062055377558318E-5 0.0 9.531027688779159E-5 5.718616613267496E-5 10 0.0 1.9062055377558318E-5 0.0 9.531027688779159E-5 5.718616613267496E-5 11 0.0 1.9062055377558318E-5 0.0 9.531027688779159E-5 5.718616613267496E-5 12 0.0 1.9062055377558318E-5 0.0 9.531027688779159E-5 1.5249644302046654E-4 13 0.0 1.9062055377558318E-5 0.0 9.531027688779159E-5 1.7155849839802488E-4 14 0.0 1.9062055377558318E-5 0.0 1.1437233226534991E-4 1.7155849839802488E-4 15 1.9062055377558318E-5 1.9062055377558318E-5 0.0 1.1437233226534991E-4 2.4780671990825816E-4 16 1.9062055377558318E-5 1.9062055377558318E-5 0.0 1.1437233226534991E-4 2.6686877528581647E-4 17 1.9062055377558318E-5 1.9062055377558318E-5 0.0 1.5249644302046654E-4 2.859308306633748E-4 18 1.9062055377558318E-5 1.9062055377558318E-5 0.0 2.2874466453069983E-4 3.049928860409331E-4 19 1.9062055377558318E-5 1.9062055377558318E-5 0.0 2.6686877528581647E-4 3.049928860409331E-4 20 1.9062055377558318E-5 1.9062055377558318E-5 0.0 4.5748932906139965E-4 3.240549414184914E-4 21 1.9062055377558318E-5 1.9062055377558318E-5 0.0 5.337375505716329E-4 4.19365218306283E-4 22 1.9062055377558318E-5 1.9062055377558318E-5 0.0 7.243581043472161E-4 4.19365218306283E-4 23 1.9062055377558318E-5 1.9062055377558318E-5 0.0 9.721648242554743E-4 5.146754951940746E-4 24 1.9062055377558318E-5 1.9062055377558318E-5 0.0 0.0015440264855822237 5.146754951940746E-4 25 1.9062055377558318E-5 1.9062055377558318E-5 0.0 0.0019443296485109486 5.337375505716329E-4 26 1.9062055377558318E-5 1.9062055377558318E-5 0.0 0.0024780671990825816 5.337375505716329E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6950 0.0 17.676064 1 TCTAGCG 1510 0.0 15.257382 28 GTCCTAT 1865 0.0 14.685618 1 ACCGTCG 1200 0.0 14.398879 8 GTCTTAG 560 0.0 14.300689 1 TATAACG 90 1.5312544E-4 14.22722 2 CTAGCGG 1580 0.0 14.176654 29 CCTATTC 1915 0.0 13.951652 3 TAGCGGC 1615 0.0 13.86942 30 CGTCGTA 1270 0.0 13.732263 10 CAAGACG 1680 0.0 13.71152 4 ATCGTTT 1255 0.0 13.640894 29 CGCTTCG 1555 0.0 13.581455 32 CTATTCC 1940 0.0 13.5230465 4 CATCGTT 1270 0.0 13.479523 28 CCGTCGT 1275 0.0 13.427047 9 TCTAGAT 1185 0.0 13.236716 2 TACCGTC 1320 0.0 13.211095 7 ATACCGT 1405 0.0 13.207553 6 TAAACGC 1600 0.0 13.199225 28 >>END_MODULE