##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062749_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5246024 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.173790665082738 32.0 32.0 32.0 32.0 32.0 2 31.190346822660363 32.0 32.0 32.0 32.0 32.0 3 31.311960448522537 32.0 32.0 32.0 32.0 32.0 4 31.42836994264609 32.0 32.0 32.0 32.0 32.0 5 31.33498550521309 32.0 32.0 32.0 32.0 32.0 6 34.85284417303466 36.0 36.0 36.0 32.0 36.0 7 34.8805358115022 36.0 36.0 36.0 32.0 36.0 8 34.81239430090293 36.0 36.0 36.0 32.0 36.0 9 34.94332545943366 36.0 36.0 36.0 32.0 36.0 10 34.76304340201265 36.0 36.0 36.0 32.0 36.0 11 34.97431216479376 36.0 36.0 36.0 36.0 36.0 12 34.85410874978841 36.0 36.0 36.0 32.0 36.0 13 34.92129182024329 36.0 36.0 36.0 32.0 36.0 14 34.85906507480713 36.0 36.0 36.0 32.0 36.0 15 34.824751850163096 36.0 36.0 36.0 32.0 36.0 16 34.83920679737645 36.0 36.0 36.0 32.0 36.0 17 34.80125672318693 36.0 36.0 36.0 32.0 36.0 18 34.80509620238108 36.0 36.0 36.0 32.0 36.0 19 34.8036985724808 36.0 36.0 36.0 32.0 36.0 20 34.78674649601298 36.0 36.0 36.0 32.0 36.0 21 34.78290491999274 36.0 36.0 36.0 32.0 36.0 22 34.76773590818494 36.0 36.0 36.0 32.0 36.0 23 34.705721514045685 36.0 36.0 36.0 32.0 36.0 24 34.67962841954211 36.0 36.0 36.0 32.0 36.0 25 34.658925502437654 36.0 36.0 36.0 32.0 36.0 26 34.58789246865817 36.0 36.0 36.0 32.0 36.0 27 34.57508009875669 36.0 36.0 36.0 32.0 36.0 28 34.54152249398783 36.0 36.0 36.0 32.0 36.0 29 34.507869769562625 36.0 36.0 36.0 32.0 36.0 30 34.49188623612854 36.0 36.0 36.0 32.0 36.0 31 34.49069714511409 36.0 36.0 36.0 32.0 36.0 32 34.46522299554863 36.0 36.0 36.0 32.0 36.0 33 34.43340232526576 36.0 36.0 36.0 32.0 36.0 34 34.43369549967747 36.0 36.0 36.0 32.0 36.0 35 34.398128563651255 36.0 36.0 36.0 32.0 36.0 36 34.37791916316052 36.0 36.0 36.0 32.0 36.0 37 34.374708922414385 36.0 36.0 36.0 32.0 36.0 38 33.91733148761805 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 22.0 21 115.0 22 447.0 23 1303.0 24 3614.0 25 8929.0 26 18877.0 27 36162.0 28 63062.0 29 99949.0 30 152159.0 31 220410.0 32 319632.0 33 516731.0 34 1236898.0 35 2567710.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.44258909266156 18.505850420332752 12.315164348980842 26.736396138024855 2 15.940014761655686 20.477088934400605 36.35566669157442 27.227229612369293 3 17.640693218330682 24.678461249891345 28.533895384390156 29.146950147387813 4 12.24532082656311 16.334808231471833 35.85359697995354 35.56627396201152 5 14.710536860119916 36.56280892455273 32.8255390465385 15.901115168788845 6 34.566065861420526 35.56032531359518 16.495454168545077 13.37815465643922 7 30.65075971114793 30.20222809462511 20.950963275496964 18.19604891873 8 28.33967826787957 32.5648690209929 19.12287213084004 19.972580580287488 9 27.463907550257975 14.48928807125807 18.20286345317065 39.843940925313305 10 15.82058022747717 26.21850991721847 30.946532933712824 27.014376921591538 11 37.83287992065231 21.00047028340723 22.17023115563712 18.996418640303343 12 25.438719391720216 23.260014712142016 27.912658141706636 23.38860775443113 13 29.106027758604487 19.134855365398444 25.33167569352192 26.427441182475146 14 23.95465594515008 19.612090985477764 24.438126855691092 31.995126213681065 15 25.433966752725496 26.85744480010004 21.714464135124047 25.99412431205042 16 26.548630562357534 25.505058880805304 22.747769643360243 25.19854091347692 17 24.668701477538036 25.714808014603058 24.423582507438013 25.19290800042089 18 25.724224669959572 24.41590049912086 25.31236990147205 24.54750492944752 19 25.995058352763923 24.777393317300874 24.742490693904564 24.48505763603064 20 26.049823637863646 24.06622615527493 24.192588520372762 25.691361686488662 21 27.351912889340618 24.027867237182036 23.840887286488016 24.77933258698933 22 26.076401113757985 23.964096230611265 24.327190330656194 25.632312324974553 23 24.535928877089034 23.58751410832256 25.10327358832425 26.773283426264154 24 25.226533466106904 24.838220336010664 24.330902794192326 25.60434340369011 25 25.301857523172817 24.177252155825617 24.59940091703841 25.92148940396316 26 25.30963002612076 24.87802655689962 24.940073606290788 24.87226981068883 27 25.97521128886925 24.397557232467985 23.957890338517775 25.66934114014499 28 25.011036930063607 24.248516590850517 25.09914175001868 25.641304729067194 29 25.089591660274525 24.446380725669574 25.023408204003644 25.44061941005226 30 25.03795255225672 24.525221386711156 25.265248500578725 25.1715775604534 31 25.728742377084053 24.40705570542567 24.0177513484498 25.846450569040474 32 25.2954237342414 24.41378461097395 23.966550667705675 26.32424098707898 33 24.828517749823487 24.126061947105086 24.78656216593748 26.25885813713395 34 25.680534439034208 24.07192570983282 24.995901658093825 25.25163819303915 35 26.45271924032372 23.99157914641641 24.697275498548997 24.858426114710873 36 25.24351775744831 24.733474341710977 24.229645156026734 25.793362744813976 37 26.37622321209358 24.38643056150715 24.246114771872946 24.99123145452632 38 25.287632393249055 24.11213150390801 24.765198143582783 25.835037959260156 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 50.0 1 92.0 2 134.0 3 134.0 4 471.5 5 809.0 6 809.0 7 1004.0 8 1199.0 9 1245.5 10 1292.0 11 1292.0 12 2013.0 13 2734.0 14 3999.0 15 5264.0 16 5264.0 17 8254.0 18 11244.0 19 11244.0 20 15116.0 21 18988.0 22 23655.0 23 28322.0 24 28322.0 25 35821.0 26 43320.0 27 43320.0 28 56496.5 29 69673.0 30 87138.0 31 104603.0 32 104603.0 33 139178.5 34 173754.0 35 173754.0 36 194266.5 37 214779.0 38 246110.5 39 277442.0 40 277442.0 41 300180.5 42 322919.0 43 370001.5 44 417084.0 45 417084.0 46 425627.5 47 434171.0 48 434171.0 49 468039.0 50 501907.0 51 505449.0 52 508991.0 53 508991.0 54 487359.0 55 465727.0 56 465727.0 57 451061.5 58 436396.0 59 392853.5 60 349311.0 61 349311.0 62 330307.5 63 311304.0 64 257759.0 65 204214.0 66 204214.0 67 170390.0 68 136566.0 69 136566.0 70 110029.0 71 83492.0 72 64928.0 73 46364.0 74 46364.0 75 34351.0 76 22338.0 77 22338.0 78 22366.5 79 22395.0 80 17323.0 81 12251.0 82 12251.0 83 11716.0 84 11181.0 85 11181.0 86 7071.5 87 2962.0 88 2542.5 89 2123.0 90 2123.0 91 1275.0 92 427.0 93 286.5 94 146.0 95 146.0 96 115.5 97 85.0 98 85.0 99 74.0 100 63.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007967939147819377 2 0.0 3 0.0 4 2.2874466453069983E-4 5 3.8124110755116636E-5 6 1.7155849839802485E-4 7 3.240549414184914E-4 8 0.00203963992539874 9 0.0036217905217360803 10 8.959166027452409E-4 11 0.0047845758997671385 12 3.240549414184914E-4 13 2.0968260915314152E-4 14 0.0 15 0.0 16 3.8124110755116636E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 1.3343438764290823E-4 22 1.9062055377558318E-5 23 1.3343438764290823E-4 24 0.0 25 1.1437233226534991E-4 26 9.531027688779159E-5 27 1.3343438764290823E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 9.531027688779159E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 5246024.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.547726519234935 #Duplication Level Percentage of deduplicated Percentage of total 1 72.28254706376052 29.308929504550896 2 14.641726117820806 11.873774127898749 3 5.16069762376864 6.277636676911093 4 2.4628219478843256 3.9944732323353245 5 1.358241411864903 2.753680065769882 6 0.8435264607627122 2.0521848145646766 7 0.5777429120124999 1.6398313116296481 8 0.41075331419975925 1.3324090440832976 9 0.31390838456797515 1.1455444196601376 >10 1.7226332874612167 12.633039811235728 >50 0.11519723466732598 3.2149761064093374 >100 0.08136751910427288 6.9237623295432575 >500 0.014299984802254072 4.132549921541254 >1k 0.013731771412610786 10.743572594591846 >5k 8.049659103943687E-4 1.9736360392749186 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 6974 0.13293877420309172 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 6952 0.13251940898478543 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 6878 0.1311088168868461 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 6746 0.1285926255770084 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 6643 0.12662923387311992 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 6308 0.12024344532163787 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 6242 0.11898534966671903 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 6024 0.11482982159441131 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 5922 0.11288549194590036 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5798 0.11052179707908313 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 5792 0.11040742474681776 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 5746 0.10953057019945009 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGT 5576 0.10629002078526519 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 5530 0.10541316623789751 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 5293 0.10089545911341619 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.8124110755116636E-5 2 0.0 0.0 0.0 0.0 3.8124110755116636E-5 3 0.0 0.0 0.0 0.0 3.8124110755116636E-5 4 0.0 0.0 0.0 1.9062055377558318E-5 3.8124110755116636E-5 5 0.0 0.0 0.0 1.9062055377558318E-5 3.8124110755116636E-5 6 0.0 0.0 0.0 1.9062055377558318E-5 9.531027688779159E-5 7 0.0 0.0 0.0 3.8124110755116636E-5 9.531027688779159E-5 8 0.0 0.0 0.0 3.8124110755116636E-5 9.531027688779159E-5 9 0.0 0.0 0.0 1.1437233226534991E-4 9.531027688779159E-5 10 0.0 0.0 0.0 1.3343438764290823E-4 1.3343438764290823E-4 11 0.0 0.0 0.0 1.3343438764290823E-4 1.3343438764290823E-4 12 0.0 0.0 0.0 1.3343438764290823E-4 1.7155849839802488E-4 13 0.0 0.0 0.0 1.3343438764290823E-4 2.2874466453069983E-4 14 0.0 0.0 0.0 1.5249644302046654E-4 2.6686877528581647E-4 15 0.0 0.0 0.0 1.9062055377558318E-4 3.049928860409331E-4 16 0.0 0.0 0.0 2.2874466453069983E-4 3.4311699679604975E-4 17 0.0 0.0 0.0 3.049928860409331E-4 3.4311699679604975E-4 18 0.0 0.0 0.0 3.6217905217360806E-4 3.8124110755116637E-4 19 0.0 0.0 0.0 4.19365218306283E-4 3.8124110755116637E-4 20 0.0 3.8124110755116636E-5 0.0 6.290478274594245E-4 4.3842727368384135E-4 21 0.0 3.8124110755116636E-5 0.0 7.243581043472161E-4 4.3842727368384135E-4 22 0.0 3.8124110755116636E-5 0.0 9.340407135003576E-4 4.3842727368384135E-4 23 0.0 3.8124110755116636E-5 0.0 0.001200909488786174 4.3842727368384135E-4 24 0.0 3.8124110755116636E-5 0.0 0.0018490193716231569 4.5748932906139965E-4 25 0.0 5.718616613267496E-5 0.0 0.0022302604791743235 4.5748932906139965E-4 26 0.0 5.718616613267496E-5 0.0 0.0027639980297459563 5.146754951940746E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6870 0.0 17.583984 1 ACCGTCG 1255 0.0 16.065233 8 TCTAGCG 1365 0.0 15.354831 28 TACCGTC 1400 0.0 14.744363 7 CGTATAC 120 5.4246993E-7 14.667187 3 CGTCGTA 1345 0.0 14.632629 10 CTAGCGG 1435 0.0 14.605815 29 CCGTCGT 1405 0.0 14.577447 9 ATACCGT 1475 0.0 14.537079 6 CGCGTAA 785 0.0 13.452835 10 CCTATAC 310 0.0 13.41983 3 AACCGCG 1225 0.0 13.323811 7 CGAAAAA 1225 0.0 13.322033 24 GCGTAAC 795 0.0 13.28349 11 TCGCGTA 810 0.0 13.235415 9 TAGCGGC 1560 0.0 13.230355 30 GTATTAG 1345 0.0 13.204679 1 TTCGTTC 1805 0.0 13.118703 29 CTTTCGT 1855 0.0 13.110103 27 TTTCGTT 1825 0.0 12.9749365 28 >>END_MODULE