##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062747_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1811585 Sequences flagged as poor quality 0 Sequence length 38 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.273805534932116 32.0 32.0 32.0 32.0 32.0 2 30.874712475539376 32.0 32.0 32.0 32.0 32.0 3 30.918804251525597 32.0 32.0 32.0 32.0 32.0 4 30.999767606819443 32.0 32.0 32.0 32.0 32.0 5 30.862682678428005 32.0 32.0 32.0 32.0 32.0 6 34.53129883499808 36.0 36.0 36.0 32.0 36.0 7 34.47966228468441 36.0 36.0 36.0 32.0 36.0 8 34.465211403273926 36.0 36.0 36.0 32.0 36.0 9 34.617335648065094 36.0 36.0 36.0 32.0 36.0 10 34.30932470736951 36.0 36.0 36.0 32.0 36.0 11 34.59384792874748 36.0 36.0 36.0 32.0 36.0 12 34.396234788872725 36.0 36.0 36.0 32.0 36.0 13 34.49949574543839 36.0 36.0 36.0 32.0 36.0 14 34.390252182481085 36.0 36.0 36.0 32.0 36.0 15 34.32969361084354 36.0 36.0 36.0 32.0 36.0 16 34.34013639989291 36.0 36.0 36.0 32.0 36.0 17 34.266881211756555 36.0 36.0 36.0 32.0 36.0 18 34.28680740898164 36.0 36.0 36.0 32.0 36.0 19 34.2806801778553 36.0 36.0 36.0 32.0 36.0 20 34.27510053351071 36.0 36.0 36.0 32.0 36.0 21 34.25364694452648 36.0 36.0 36.0 32.0 36.0 22 34.22903203548274 36.0 36.0 36.0 32.0 36.0 23 34.16923964373739 36.0 36.0 36.0 32.0 36.0 24 34.15216785301269 36.0 36.0 36.0 32.0 36.0 25 34.13302715577795 36.0 36.0 36.0 32.0 36.0 26 34.07425486521471 36.0 36.0 36.0 32.0 36.0 27 34.08103235564437 36.0 36.0 36.0 32.0 36.0 28 34.058959419513855 36.0 36.0 36.0 32.0 36.0 29 34.027246306411236 36.0 36.0 36.0 32.0 36.0 30 34.01191663653651 36.0 36.0 36.0 32.0 36.0 31 34.031459191812694 36.0 36.0 36.0 32.0 36.0 32 33.98522233292945 36.0 36.0 36.0 32.0 36.0 33 33.94142035841542 36.0 36.0 36.0 32.0 36.0 34 33.9602094298639 36.0 36.0 36.0 32.0 36.0 35 33.91812032005122 36.0 36.0 36.0 32.0 36.0 36 33.87860961533685 36.0 36.0 36.0 32.0 36.0 37 33.892544926128224 36.0 36.0 36.0 32.0 36.0 38 33.28011658299224 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 2.0 7 4.0 8 2.0 9 10.0 10 12.0 11 17.0 12 5.0 13 7.0 14 125.0 15 336.0 16 505.0 17 590.0 18 747.0 19 956.0 20 1371.0 21 2020.0 22 3044.0 23 4764.0 24 7313.0 25 11234.0 26 16773.0 27 24478.0 28 34541.0 29 47349.0 30 64575.0 31 88697.0 32 121709.0 33 183293.0 34 402633.0 35 794473.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.20496391896716 17.202899303579144 11.261438002407244 26.330698775046447 2 17.09604356895629 19.50225527118207 37.10888980568824 26.292811354173395 3 18.619564587318543 23.75872605768514 28.483122030932133 29.13858732406418 4 12.712312100789216 15.24805097091264 35.88984639061839 36.149790537679756 5 14.98813190695415 36.097108601331435 33.51637796840327 15.39838152331114 6 34.513889847232385 35.31065509294399 16.74570470446987 13.429750355353768 7 30.57611460467745 30.137603334981982 21.099766833886807 18.186515226453757 8 28.26738441989005 32.42077767516625 19.537983162754703 19.773854742188995 9 27.62080614712019 14.189105642588236 18.44925424215326 39.74083396813831 10 16.084172013760394 25.851689357774667 31.230983408921293 26.83315521954365 11 37.80344146897246 20.754910706399816 22.419395082227837 19.022252742399886 12 25.273054668343324 23.28226450173388 28.30881094669624 23.135869883226555 13 29.359842899187942 18.854913071730522 25.27459241073228 26.51065161834926 14 23.9919201242786 19.6569089120433 24.479053380397854 31.872117583280247 15 25.535069082492623 26.564956978038477 21.920992420360783 25.978981519108114 16 26.557773811502038 25.18357520193134 23.003473036900534 25.255177949666084 17 24.52291720037809 25.4863031245307 24.808968118656196 25.18181155643501 18 25.73818862320901 24.127364414475334 25.50837843880331 24.626068523512348 19 26.036070352091684 24.61815331279741 24.850286509224603 24.495489825886303 20 26.05321281316227 23.894095494239245 24.204394084177533 25.848297608420957 21 27.459098519613995 23.848639267077267 23.863047319688192 24.829214893620545 22 26.341811067481263 23.68327931586336 24.356551736701682 25.618357879953695 23 24.744978795617577 23.517653021003433 25.09873480334191 26.638633380037074 24 25.370637617054353 24.683907696962134 24.302642576923798 25.642812109059708 25 25.367420536682427 23.96741302816357 24.632082576040315 26.033083859113688 26 25.27087751339826 24.781489838746097 25.104858928371286 24.842773719484352 27 26.017979145780796 24.233589778694427 24.01519902485989 25.73323205066489 28 25.06940415381583 24.04234964457455 25.12526973636634 25.76297646524327 29 25.08533468919293 24.444006476769033 24.951791352199436 25.518867481838605 30 25.020355687696554 24.469496277462238 25.335061519718383 25.175086515122825 31 25.827353935803405 24.304801882199154 23.908996863369435 25.95884731862801 32 25.23795696514749 24.368659127268472 23.916482929258244 26.476900978325794 33 24.95956260261162 23.91227541373116 24.72488768616384 26.40327429749338 34 25.931998657374283 23.942074975046594 24.88610868201853 25.23981768556059 35 26.60185877341272 23.81817057564117 24.724314333004656 24.855656317941456 36 25.3363572823767 24.545110245688498 24.21474307658843 25.903789395346372 37 26.297998866084843 24.317622112560127 24.26158881718958 25.122790204165458 38 25.24584734113906 24.10286559682913 24.872011438097918 25.779275623933888 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 145.0 1 152.0 2 159.0 3 159.0 4 372.0 5 585.0 6 585.0 7 623.0 8 661.0 9 662.5 10 664.0 11 664.0 12 916.0 13 1168.0 14 1780.5 15 2393.0 16 2393.0 17 3508.5 18 4624.0 19 4624.0 20 5926.5 21 7229.0 22 8730.5 23 10232.0 24 10232.0 25 12631.5 26 15031.0 27 15031.0 28 19234.5 29 23438.0 30 29223.0 31 35008.0 32 35008.0 33 46665.0 34 58322.0 35 58322.0 36 65352.0 37 72382.0 38 83691.5 39 95001.0 40 95001.0 41 102125.5 42 109250.0 43 124691.5 44 140133.0 45 140133.0 46 143838.5 47 147544.0 48 147544.0 49 159007.5 50 170471.0 51 173387.0 52 176303.0 53 176303.0 54 168483.5 55 160664.0 56 160664.0 57 156507.0 58 152350.0 59 137459.0 60 122568.0 61 122568.0 62 116551.5 63 110535.0 64 91037.5 65 71540.0 66 71540.0 67 59660.5 68 47781.0 69 47781.0 70 38429.5 71 29078.0 72 22556.5 73 16035.0 74 16035.0 75 12117.0 76 8199.0 77 8199.0 78 8012.5 79 7826.0 80 6221.5 81 4617.0 82 4617.0 83 4724.0 84 4831.0 85 4831.0 86 3184.5 87 1538.0 88 1330.0 89 1122.0 90 1122.0 91 844.0 92 566.0 93 484.5 94 403.0 95 403.0 96 363.5 97 324.0 98 324.0 99 594.5 100 865.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11299497401446801 2 0.0517778630315442 3 0.011040056083484904 4 0.00231841177753183 5 2.760014020871226E-4 6 5.520028041742452E-4 7 5.5200280417424524E-5 8 3.3120168250454717E-4 9 2.760014020871226E-4 10 4.968025237568208E-4 11 0.0018216092537750093 12 0.0023736120579492545 13 0.014572874030200075 14 0.009439247951379593 15 0.023018516934066025 16 0.011150456644319753 17 0.020368903474029646 18 0.004968025237568207 19 0.006900035052178065 20 0.0057408291634121495 21 0.005409627480907603 22 0.007396837575934886 23 0.009218446829709894 24 0.013634469263103856 25 0.01705688664898418 26 0.018878495902759185 27 0.008445642903865952 28 0.005188826359237906 29 0.010377652718475811 30 0.0028704145817060748 31 0.004802424396315934 32 0.006789634491343215 33 0.007893640099691707 34 0.011536858607241724 35 0.01562167935813114 36 0.014738474871452347 37 0.008942445427622773 38 0.005244026639655329 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1811585.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.778038291585304 #Duplication Level Percentage of deduplicated Percentage of total 1 81.53639824061344 43.848675467416584 2 10.938781503244172 11.765324210895004 3 3.234856535116657 5.218927158398657 4 1.372630428003948 2.952694868695658 5 0.7710863116926879 2.073375459816333 6 0.45121777101043936 1.4559363940345909 7 0.3101736885883315 1.167637275136188 8 0.21611934807571387 0.9297979661094555 9 0.15832225020421153 0.7662834030502834 >10 0.8416642871726769 7.942580861454641 >50 0.07030837028395805 2.7141958675543796 >100 0.0791051827003387 9.353551588120247 >500 0.013338795427050864 4.884267748653266 >1k 0.00599728786642597 4.926751730664663 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2445 0.13496468562060296 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2430 0.13413668141434157 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2393 0.1320942710388969 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2380 0.13137666739347037 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2371 0.13087986486971354 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2289 0.12635344187548472 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2248 0.12409023037837032 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2211 0.1220478200029256 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2073 0.11443018130532104 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 2002 0.1105109613956839 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1967 0.10857895158107403 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1931 0.10659174148604676 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1862 0.10278292213724445 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1814 0.10013330867720807 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1040056083484905E-4 2 0.0 0.0 0.0 0.0 1.1040056083484905E-4 3 0.0 0.0 0.0 0.0 1.1040056083484905E-4 4 0.0 0.0 0.0 0.0 1.1040056083484905E-4 5 0.0 0.0 0.0 0.0 1.1040056083484905E-4 6 0.0 0.0 0.0 0.0 1.6560084125227356E-4 7 0.0 0.0 0.0 5.5200280417424524E-5 1.6560084125227356E-4 8 0.0 0.0 0.0 5.5200280417424524E-5 1.6560084125227356E-4 9 0.0 0.0 0.0 5.5200280417424524E-5 1.6560084125227356E-4 10 0.0 0.0 0.0 1.1040056083484905E-4 1.6560084125227356E-4 11 0.0 0.0 0.0 1.1040056083484905E-4 1.6560084125227356E-4 12 0.0 0.0 0.0 1.1040056083484905E-4 3.864019629219716E-4 13 0.0 0.0 0.0 1.1040056083484905E-4 3.864019629219716E-4 14 0.0 0.0 0.0 1.1040056083484905E-4 3.864019629219716E-4 15 0.0 0.0 0.0 1.1040056083484905E-4 5.520028041742452E-4 16 0.0 0.0 0.0 1.6560084125227356E-4 6.624033650090942E-4 17 0.0 0.0 0.0 2.208011216696981E-4 6.624033650090942E-4 18 0.0 0.0 0.0 2.760014020871226E-4 7.176036454265188E-4 19 0.0 0.0 0.0 2.760014020871226E-4 7.728039258439433E-4 20 0.0 0.0 0.0 3.312016825045471E-4 8.280042062613678E-4 21 0.0 0.0 0.0 3.864019629219716E-4 8.280042062613678E-4 22 0.0 0.0 0.0 5.520028041742452E-4 8.280042062613678E-4 23 0.0 0.0 0.0 0.0010488053279310659 8.280042062613678E-4 24 0.0 0.0 0.0 0.0014904075712704622 8.280042062613678E-4 25 0.0 0.0 0.0 0.0019320098146098582 8.280042062613678E-4 26 0.0 0.0 0.0 0.0021528109362795563 8.280042062613678E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTATTC 300 0.0 17.597965 3 ATCGTTT 500 0.0 17.278957 29 CATCGTT 520 0.0 17.229729 28 TCTAGCG 545 0.0 16.732935 28 AAGACGG 645 0.0 16.368847 5 GTATCAA 2550 0.0 16.141003 1 GTACTAA 80 5.5776643E-5 16.015392 1 CTAGCGG 570 0.0 15.999034 29 CAAGACG 630 0.0 15.996827 4 GTATAAT 185 0.0 15.582542 1 CGTTTAT 560 0.0 15.427215 31 TAGCGGC 595 0.0 15.326382 30 GCATCGT 585 0.0 15.315314 27 CGGCATC 600 0.0 15.199922 25 CTATAGA 190 1.8189894E-12 15.172476 1 GCGCAAG 650 0.0 15.029829 1 CGTCGTA 515 0.0 14.912955 10 GACGGAC 720 0.0 14.886756 7 ACCGTCG 495 0.0 14.866557 8 TCGTTTA 585 0.0 14.767931 30 >>END_MODULE