##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062743_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 825786 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.20649780935981 32.0 32.0 32.0 32.0 32.0 2 30.838740303177822 32.0 32.0 32.0 32.0 32.0 3 30.906438229759285 32.0 32.0 32.0 32.0 32.0 4 30.973511297115717 32.0 32.0 32.0 32.0 32.0 5 30.8900187215574 32.0 32.0 32.0 32.0 32.0 6 34.536674150445755 36.0 36.0 36.0 32.0 36.0 7 34.45675513995151 36.0 36.0 36.0 32.0 36.0 8 34.43568914948909 36.0 36.0 36.0 32.0 36.0 9 34.56291218305953 36.0 36.0 36.0 32.0 36.0 10 34.30418776777519 36.0 36.0 36.0 32.0 36.0 11 34.57250183461575 36.0 36.0 36.0 32.0 36.0 12 34.40754989791544 36.0 36.0 36.0 32.0 36.0 13 34.48136442129075 36.0 36.0 36.0 32.0 36.0 14 34.38911897271206 36.0 36.0 36.0 32.0 36.0 15 34.344031020143234 36.0 36.0 36.0 32.0 36.0 16 34.35473718372557 36.0 36.0 36.0 32.0 36.0 17 34.287303248057 36.0 36.0 36.0 32.0 36.0 18 34.31840573707958 36.0 36.0 36.0 32.0 36.0 19 34.30167258829769 36.0 36.0 36.0 32.0 36.0 20 34.26032047043665 36.0 36.0 36.0 32.0 36.0 21 34.23527645176838 36.0 36.0 36.0 32.0 36.0 22 34.21052790916775 36.0 36.0 36.0 32.0 36.0 23 34.166659400861725 36.0 36.0 36.0 32.0 36.0 24 34.158296459373254 36.0 36.0 36.0 32.0 36.0 25 34.13658260130349 36.0 36.0 36.0 32.0 36.0 26 34.10261738513368 36.0 36.0 36.0 32.0 36.0 27 34.098776196254235 36.0 36.0 36.0 32.0 36.0 28 34.08435115150899 36.0 36.0 36.0 32.0 36.0 29 34.05702930299133 36.0 36.0 36.0 32.0 36.0 30 34.0074668255456 36.0 36.0 36.0 32.0 36.0 31 34.03675165236514 36.0 36.0 36.0 32.0 36.0 32 33.98807681408985 36.0 36.0 36.0 32.0 36.0 33 33.926706192645554 36.0 36.0 36.0 32.0 36.0 34 33.918407432434066 36.0 36.0 36.0 32.0 36.0 35 33.882298803806314 36.0 36.0 36.0 32.0 36.0 36 33.8392585972637 36.0 36.0 36.0 32.0 36.0 37 33.8374227705483 36.0 36.0 36.0 32.0 36.0 38 33.233056748358536 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 4.0 10 10.0 11 8.0 12 0.0 13 7.0 14 140.0 15 254.0 16 315.0 17 375.0 18 456.0 19 658.0 20 850.0 21 1213.0 22 1733.0 23 2485.0 24 3525.0 25 5436.0 26 7631.0 27 11088.0 28 15697.0 29 21416.0 30 29055.0 31 39350.0 32 53656.0 33 80129.0 34 177163.0 35 373130.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.41250812310259 17.49207088195071 11.703693465630788 25.391727529315915 2 16.128156756121466 20.28441853167146 38.37299611187242 25.214428600334653 3 18.813947291929075 24.91764363918225 28.576324968510804 27.692084100377873 4 12.36996795671371 15.998028478077112 36.50343078722822 35.12857277798096 5 14.227778141068026 36.99687328193988 33.776789628305636 14.998558948686464 6 33.05012805996718 36.05018255357024 17.579757442917952 13.319931943544628 7 29.378797896791664 30.97545853284023 21.46221902526805 18.183524545100063 8 27.82789183114692 33.10070563332013 19.906924700556928 19.16447783497602 9 27.791286825610573 14.487686852736308 18.70452806060665 39.01649826104647 10 15.811717406573178 27.04352248782969 31.989634042965438 25.155126062631695 11 36.62643336437518 21.496378518395627 22.770224530648477 19.10696358658072 12 24.684139841915517 24.11956970600452 29.222135702703323 21.974154749376634 13 29.74044015323369 19.951384759231022 25.236202972869208 25.07197211466608 14 23.749321797430582 20.11306605693026 25.724586780863063 30.413025364776097 15 25.042969114321462 27.248898670410238 23.16189696375817 24.546235251510126 16 25.162771770724333 25.989104949036935 24.561824206487618 24.286299073751113 17 23.67866767600303 26.05868281604845 25.780590461771386 24.482059046177138 18 24.42206454566262 25.10872053101396 26.988607808017285 23.48060711530613 19 25.17457533928048 25.362169651139975 26.015661521245754 23.44759348833379 20 25.420686832184252 24.584823423552166 25.794536490608948 24.199953253654634 21 26.63484851053729 24.597630714007174 24.881620473421222 23.88590030203431 22 25.398586222389618 24.745225745430414 25.370005486048118 24.48618254613185 23 24.00285814632256 24.618691792517954 25.917937290331956 25.46051277082753 24 24.27129318436431 25.57737608623248 25.83389348109123 24.317437248311986 25 24.705929374603343 24.751711374768064 25.74910494978514 24.793254300843454 26 24.101783352470097 25.63732686074735 26.255032484048662 24.005857302733894 27 24.84159125700002 25.289810490824888 25.278910806673515 24.58968744550158 28 24.01759893040357 25.167608860986373 26.14225923180887 24.67253297680119 29 24.03824610484374 25.481739846555367 26.09018959555773 24.389824453043158 30 24.222475725451158 25.533991634393445 26.163834131384107 24.07969850877129 31 24.548555899624457 25.4213498454112 25.242358662967355 24.787735591996988 32 24.114578855010734 25.68965663401301 25.092250922509223 25.10351358846703 33 23.90860724878317 25.123317964760066 25.815933177588768 25.152141608867996 34 24.517728503674565 25.410209331505335 25.99942350268144 24.072638662138658 35 25.129837412553535 25.123781563087416 25.905955080130997 23.84042594422805 36 24.11587596103072 25.914160033717828 25.525872133863647 24.44409187138781 37 24.951556489977037 25.723382713417887 25.247546336217336 24.077514460387743 38 24.153457318941413 25.793438862791117 25.674878684720753 24.378225133546717 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 788.0 1 535.5 2 283.0 3 283.0 4 621.0 5 959.0 6 959.0 7 1048.0 8 1137.0 9 1107.5 10 1078.0 11 1078.0 12 1327.5 13 1577.0 14 1962.0 15 2347.0 16 2347.0 17 3584.0 18 4821.0 19 4821.0 20 5655.5 21 6490.0 22 6898.0 23 7306.0 24 7306.0 25 8657.0 26 10008.0 27 10008.0 28 12584.0 29 15160.0 30 18417.0 31 21674.0 32 21674.0 33 26320.5 34 30967.0 35 30967.0 36 34227.5 37 37488.0 38 41983.0 39 46478.0 40 46478.0 41 49888.0 42 53298.0 43 59582.0 44 65866.0 45 65866.0 46 68723.0 47 71580.0 48 71580.0 49 74184.0 50 76788.0 51 75561.5 52 74335.0 53 74335.0 54 70851.5 55 67368.0 56 67368.0 57 64916.5 58 62465.0 59 56021.0 60 49577.0 61 49577.0 62 46181.5 63 42786.0 64 35139.5 65 27493.0 66 27493.0 67 22677.0 68 17861.0 69 17861.0 70 14443.5 71 11026.0 72 8580.5 73 6135.0 74 6135.0 75 4585.0 76 3035.0 77 3035.0 78 2887.0 79 2739.0 80 2179.0 81 1619.0 82 1619.0 83 1577.5 84 1536.0 85 1536.0 86 1031.5 87 527.0 88 467.5 89 408.0 90 408.0 91 291.0 92 174.0 93 150.5 94 127.0 95 127.0 96 113.0 97 99.0 98 99.0 99 241.0 100 383.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1184326205578685 2 0.05485682731361394 3 0.012836255397887587 4 0.00339070897302691 5 0.0 6 1.2109674903667536E-4 7 0.0 8 3.6329024711002607E-4 9 2.4219349807335071E-4 10 7.265804942200521E-4 11 0.0023008382316968322 12 0.003027418725916884 13 0.014410513135364367 14 0.008961159428713977 15 0.023371672564078346 16 0.010898707413300783 17 0.019496576594904735 18 0.0054493537066503915 19 0.008234578934493924 20 0.0064181276989437935 21 0.006297030949907119 22 0.006660321197017145 23 0.009203352926787329 24 0.013441739143070966 25 0.016226964370914497 26 0.018164512355501303 27 0.008961159428713977 28 0.00653922444798047 29 0.009808836671970704 30 0.0029063219768802086 31 0.005691547204723742 32 0.005933740702797093 33 0.009082256177750651 34 0.01332064239403429 35 0.0167113513670612 36 0.01332064239403429 37 0.00992993342100738 38 0.0054493537066503915 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 825786.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.46847300569608 #Duplication Level Percentage of deduplicated Percentage of total 1 83.14872346002052 52.77322510380401 2 11.170361757481928 14.179316073372034 3 2.765862314641214 5.266351729628339 4 1.0562093274906759 2.681439727608255 5 0.5088206519308741 1.6147034905907682 6 0.2887757490684226 1.0996893500669311 7 0.18249808820232416 0.8108012489262248 8 0.1170470007123688 0.5943035524088536 9 0.0995137999319488 0.5684390032207619 >10 0.5235555729159849 6.400770032732674 >50 0.06960490379917532 3.185113079086636 >100 0.06308334996164613 7.814719355493629 >500 0.005177053024490738 2.1524401007107894 >1k 7.669708184430722E-4 0.8586881523500499 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2871 0.34766876648429496 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 1969 0.23843949885321378 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1128 0.1365971329133698 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1088 0.1317532629519028 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 867 0.10499088141479754 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.2109674903667536E-4 2 0.0 0.0 0.0 0.0 1.2109674903667536E-4 3 0.0 0.0 0.0 0.0 1.2109674903667536E-4 4 0.0 0.0 0.0 0.0 2.4219349807335071E-4 5 0.0 0.0 0.0 0.0 2.4219349807335071E-4 6 0.0 0.0 0.0 0.0 2.4219349807335071E-4 7 0.0 0.0 0.0 0.0 2.4219349807335071E-4 8 0.0 0.0 0.0 0.0 2.4219349807335071E-4 9 0.0 0.0 0.0 0.0 2.4219349807335071E-4 10 0.0 0.0 0.0 0.0 2.4219349807335071E-4 11 0.0 0.0 0.0 0.0 2.4219349807335071E-4 12 0.0 0.0 0.0 0.0 3.6329024711002607E-4 13 0.0 0.0 0.0 0.0 3.6329024711002607E-4 14 0.0 0.0 0.0 0.0 4.8438699614670143E-4 15 0.0 0.0 0.0 0.0 4.8438699614670143E-4 16 0.0 0.0 0.0 0.0 7.265804942200521E-4 17 0.0 0.0 0.0 0.0 7.265804942200521E-4 18 0.0 0.0 0.0 0.0 7.265804942200521E-4 19 0.0 0.0 0.0 0.0 7.265804942200521E-4 20 0.0 0.0 0.0 0.0 7.265804942200521E-4 21 0.0 0.0 0.0 1.2109674903667536E-4 9.687739922934029E-4 22 0.0 0.0 0.0 8.476772432567275E-4 9.687739922934029E-4 23 0.0 0.0 0.0 0.002058644733623481 9.687739922934029E-4 24 0.0 0.0 0.0 0.0038750959691736114 9.687739922934029E-4 25 0.0 0.0 0.0 0.004722773212430339 9.687739922934029E-4 26 0.0 0.0 0.0 0.006297030949907119 9.687739922934029E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCGCT 55 5.8294667E-5 20.364214 15 ACCGAGT 55 5.8349047E-5 20.361748 8 GTCTATA 50 7.1512745E-4 19.21684 1 AAATCGC 60 1.13744114E-4 18.667196 14 TTAGGAC 100 6.823939E-8 17.596235 3 GTCCTAA 120 1.6370905E-9 17.348537 1 CATCGTT 205 0.0 17.16914 28 GTAGTAC 75 3.237846E-5 17.063017 3 CGTCGTA 145 6.91216E-11 16.552195 10 ATCGTTT 215 0.0 16.371565 29 CGCGGTT 225 0.0 16.35602 10 GTATTAA 100 1.3013141E-6 16.014034 1 CAAATCG 70 3.6940232E-4 16.000454 13 CAACTAA 80 5.6164183E-5 16.000454 26 GTGCGCC 60 0.002440661 16.000454 11 GCATCGT 225 0.0 15.642994 27 GTACAGA 145 1.204171E-9 15.461825 1 CCTAGAA 135 7.876224E-9 15.4106455 2 CGTATAT 135 7.894414E-9 15.407845 10 GACCGCG 270 0.0 15.405978 7 >>END_MODULE