##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062742_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1944962 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.23512078899228 32.0 32.0 32.0 32.0 32.0 2 30.865790694111247 32.0 32.0 32.0 32.0 32.0 3 30.918805611626347 32.0 32.0 32.0 32.0 32.0 4 30.98808871330134 32.0 32.0 32.0 32.0 32.0 5 30.900059744097828 32.0 32.0 32.0 32.0 32.0 6 34.55571728393665 36.0 36.0 36.0 32.0 36.0 7 34.480051538281984 36.0 36.0 36.0 32.0 36.0 8 34.46835619410559 36.0 36.0 36.0 32.0 36.0 9 34.58826907672232 36.0 36.0 36.0 32.0 36.0 10 34.32355285090403 36.0 36.0 36.0 32.0 36.0 11 34.587678833828114 36.0 36.0 36.0 32.0 36.0 12 34.413122724248595 36.0 36.0 36.0 32.0 36.0 13 34.49245795033528 36.0 36.0 36.0 32.0 36.0 14 34.39998159347072 36.0 36.0 36.0 32.0 36.0 15 34.34110126573167 36.0 36.0 36.0 32.0 36.0 16 34.36468527405677 36.0 36.0 36.0 32.0 36.0 17 34.28782567474326 36.0 36.0 36.0 32.0 36.0 18 34.31089759080126 36.0 36.0 36.0 32.0 36.0 19 34.29815286879641 36.0 36.0 36.0 32.0 36.0 20 34.27264285883221 36.0 36.0 36.0 32.0 36.0 21 34.254334017836854 36.0 36.0 36.0 32.0 36.0 22 34.231815325954955 36.0 36.0 36.0 32.0 36.0 23 34.17070410630131 36.0 36.0 36.0 32.0 36.0 24 34.15418450334762 36.0 36.0 36.0 32.0 36.0 25 34.13272392982485 36.0 36.0 36.0 32.0 36.0 26 34.086910181278604 36.0 36.0 36.0 32.0 36.0 27 34.08053782027618 36.0 36.0 36.0 32.0 36.0 28 34.06324596573095 36.0 36.0 36.0 32.0 36.0 29 34.02836405030021 36.0 36.0 36.0 32.0 36.0 30 33.9962837320215 36.0 36.0 36.0 32.0 36.0 31 34.02135003151732 36.0 36.0 36.0 32.0 36.0 32 33.97151666716368 36.0 36.0 36.0 32.0 36.0 33 33.92337022522805 36.0 36.0 36.0 32.0 36.0 34 33.92769164641777 36.0 36.0 36.0 32.0 36.0 35 33.887598832265105 36.0 36.0 36.0 32.0 36.0 36 33.83307951517819 36.0 36.0 36.0 32.0 36.0 37 33.83446771710707 36.0 36.0 36.0 32.0 36.0 38 33.22104853462433 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 3.0 7 3.0 8 5.0 9 11.0 10 9.0 11 13.0 12 7.0 13 8.0 14 210.0 15 522.0 16 750.0 17 814.0 18 1131.0 19 1440.0 20 1855.0 21 2594.0 22 3813.0 23 5623.0 24 8255.0 25 12207.0 26 17823.0 27 26115.0 28 36762.0 29 50672.0 30 68190.0 31 92963.0 32 127840.0 33 191119.0 34 425433.0 35 868772.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.21526556291493 17.47332376906355 11.651936764630939 25.659473903390577 2 16.549943876348948 19.797605047939165 38.063770048386715 25.588681027325173 3 18.58415452617636 24.87628115339286 28.507527001149775 28.03203731928101 4 12.497133543454453 15.705816721596372 36.391606809569595 35.40544292537958 5 14.641293025350677 36.71081843412557 33.23958666459635 15.4083018759274 6 33.246047860134844 35.8629667771917 17.40746205961154 13.483523303061915 7 29.931808401299563 30.601744713647218 21.185309114167328 18.281137770885895 8 28.264150070310112 32.49987788920566 19.662305811702584 19.57366622878164 9 28.31534492296998 14.03538177727414 18.456304409971228 39.19296888978465 10 16.39378904342014 26.090542173320653 31.06809943700352 26.44756934625569 11 37.23909006213096 21.00369988750203 22.683148544621794 19.074061505745213 12 25.38618475580537 23.39381898727148 28.66759832260798 22.55239793431517 13 29.748179260617576 19.418494690892114 25.21339019281865 25.61993585567166 14 24.11238990518824 19.893860605789488 24.920544569855732 31.073204919166535 15 25.544332961342047 26.968819587655375 22.4245946237831 25.062252827219478 16 25.743010566358677 25.30352121113332 24.036524871744902 24.916943350763106 17 24.190984569734464 25.486036651058985 25.301007171306544 25.021971607900007 18 25.03091483752807 24.258159588947066 26.710059700986033 24.00086587253883 19 25.986021263762904 24.47435766251836 25.42087637307687 24.118744700641862 20 26.189637592892435 23.82961832155269 25.06595600601998 24.914788079534897 21 27.496133373919196 23.640305052117185 24.14162957722146 24.72193199674216 22 26.14031759057728 24.0942272104877 24.713047046247205 25.052408152687818 23 24.391347540194612 23.936850700436242 25.48941067098316 26.18239108838598 24 25.0941668247898 24.825588899396152 25.15931869755904 24.92092557825501 25 25.15395062369608 24.23973461097995 25.240600077033164 25.3657146882908 26 24.756273031799957 25.007533706264653 25.786513791567806 24.449679470367595 27 25.548472883455393 24.54971156550592 24.802435611928985 25.0993799391097 28 24.620177534994877 24.504950495049506 25.410004648159042 25.464867321796575 29 24.805437816975026 24.502519859868947 25.376616338029905 25.315425985126115 30 24.514784246864117 24.785285473657364 25.919066608806173 24.78086367067234 31 25.36991189574544 24.557820505898896 24.58286093307727 25.489406665278384 32 24.77037945043266 24.88313942696542 24.525063514254906 25.821417608347012 33 24.42024886877828 24.454905388728918 25.364716166186756 25.760129576306046 34 25.237154475390856 24.55320137973306 25.53205493427345 24.677589210602633 35 25.9524163362317 24.32848124015573 25.36254428154242 24.356558142070153 36 24.754264345999914 25.08249467390628 24.95933759489394 25.20390338519986 37 25.754701700710882 24.942474065123214 24.644650409430398 24.65817382473551 38 24.84066804501555 24.945561046441377 25.04819164979723 25.16557925874584 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 607.0 1 515.0 2 423.0 3 423.0 4 1048.0 5 1673.0 6 1673.0 7 1806.5 8 1940.0 9 1837.5 10 1735.0 11 1735.0 12 2222.5 13 2710.0 14 3523.5 15 4337.0 16 4337.0 17 6550.5 18 8764.0 19 8764.0 20 10363.5 21 11963.0 22 12477.5 23 12992.0 24 12992.0 25 15320.0 26 17648.0 27 17648.0 28 23319.0 29 28990.0 30 36223.5 31 43457.0 32 43457.0 33 56060.5 34 68664.0 35 68664.0 36 75292.5 37 81921.0 38 93410.0 39 104899.0 40 104899.0 41 110800.5 42 116702.0 43 132676.5 44 148651.0 45 148651.0 46 154757.0 47 160863.0 48 160863.0 49 171430.5 50 181998.0 51 183034.0 52 184070.0 53 184070.0 54 176775.5 55 169481.0 56 169481.0 57 164320.5 58 159160.0 59 142678.0 60 126196.0 61 126196.0 62 119247.0 63 112298.0 64 92326.0 65 72354.0 66 72354.0 67 59782.0 68 47210.0 69 47210.0 70 38064.0 71 28918.0 72 22366.0 73 15814.0 74 15814.0 75 11936.0 76 8058.0 77 8058.0 78 7826.5 79 7595.0 80 5919.5 81 4244.0 82 4244.0 83 4242.5 84 4241.0 85 4241.0 86 2814.0 87 1387.0 88 1197.5 89 1008.0 90 1008.0 91 734.0 92 460.0 93 410.0 94 360.0 95 360.0 96 338.0 97 316.0 98 316.0 99 585.5 100 855.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11902546167997113 2 0.05347148170504102 3 0.011825423838614842 4 0.0026735740852520513 5 2.0565954501938855E-4 6 1.542446587645414E-4 7 5.141488625484714E-5 8 3.5990420378392997E-4 9 3.084893175290828E-4 10 6.169786350581656E-4 11 0.0019537656776841914 12 0.0019537656776841914 13 0.014653242582631435 14 0.00827779668703039 15 0.024267826312287848 16 0.010540051682243663 17 0.020925858705722784 18 0.005295733284249256 19 0.007763647824481918 20 0.005398563056758949 21 0.005861297033052573 22 0.006735350099384975 23 0.008946190208343403 24 0.014139093720082964 25 0.017738135757922262 26 0.018920678141783748 27 0.007866477596991613 28 0.005449977943013796 29 0.010848540999772746 30 0.0027764038577617455 31 0.005501392829268643 32 0.006324031009346197 33 0.008329211573285237 34 0.012236742928653618 35 0.015578710535218683 36 0.014961731900160516 37 0.009614583729656415 38 0.006324031009346197 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1944962.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.0698882181159 #Duplication Level Percentage of deduplicated Percentage of total 1 75.45719980576062 37.02676359720711 2 13.916033526291411 13.657164191493454 3 4.58769690171711 6.753533224375658 4 2.0660203687973127 4.055175542129389 5 1.1103731726264567 2.7242943730587466 6 0.666471337323001 1.9622204413810727 7 0.4293882581829284 1.4749023681845452 8 0.31682353326681123 1.243719628981676 9 0.21039611578511272 0.9291702494791125 >10 1.0545379204526224 9.118460709025976 >50 0.08230316672768655 2.840586005446954 >100 0.08315450143710323 8.804285519149072 >500 0.013594513551076352 4.54287509457957 >1k 0.00590149425473082 4.580521230821505 >5k 1.0538382597733608E-4 0.28632782468625023 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5537 0.2846842251930886 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3887 0.19984966287259084 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2421 0.12447543962298493 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2361 0.1213905464476941 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2327 0.11964244031502928 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2221 0.11419246237201548 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2208 0.11352406885070249 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 2123 0.10915380351904048 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2098 0.10786843136266928 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 2059 0.10586325079873025 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2029 0.10432080421108483 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 1963 0.10092742171826494 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.570744312742357E-4 2 0.0 0.0 0.0 0.0 2.570744312742357E-4 3 0.0 0.0 0.0 5.141488625484714E-5 3.0848931752908284E-4 4 0.0 0.0 0.0 5.141488625484714E-5 3.0848931752908284E-4 5 0.0 0.0 0.0 5.141488625484714E-5 3.0848931752908284E-4 6 0.0 0.0 0.0 5.141488625484714E-5 3.0848931752908284E-4 7 0.0 0.0 0.0 5.141488625484714E-5 3.5990420378392997E-4 8 0.0 0.0 0.0 5.141488625484714E-5 3.5990420378392997E-4 9 0.0 0.0 0.0 5.141488625484714E-5 3.5990420378392997E-4 10 0.0 0.0 0.0 1.0282977250969428E-4 4.113190900387771E-4 11 0.0 0.0 0.0 1.0282977250969428E-4 4.113190900387771E-4 12 0.0 0.0 0.0 1.0282977250969428E-4 6.683935213130128E-4 13 0.0 0.0 0.0 1.0282977250969428E-4 7.198084075678599E-4 14 0.0 0.0 0.0 1.0282977250969428E-4 7.198084075678599E-4 15 0.0 0.0 0.0 1.0282977250969428E-4 9.254679525872485E-4 16 0.0 0.0 0.0 1.5424465876454142E-4 9.254679525872485E-4 17 0.0 0.0 0.0 2.0565954501938855E-4 9.254679525872485E-4 18 0.0 0.0 0.0 2.570744312742357E-4 0.00107971261135179 19 0.0 0.0 0.0 3.5990420378392997E-4 0.00107971261135179 20 0.0 0.0 0.0 3.5990420378392997E-4 0.0012853721563711785 21 0.0 0.0 0.0 5.655637488033186E-4 0.0015424465876454142 22 0.0 0.0 0.0 8.740530663324013E-4 0.0015424465876454142 23 0.0 0.0 0.0 0.0016452763601551084 0.0015424465876454142 24 0.0 0.0 0.0 0.0027764038577617455 0.0015938614739002613 25 0.0 0.0 0.0 0.003393382492819911 0.0015938614739002613 26 0.0 0.0 0.0 0.004524509990426548 0.0016452763601551084 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGCGG 435 0.0 15.447804 29 TCTAGCG 445 0.0 15.100273 28 CGTTTTT 370 0.0 14.702254 30 TACCGTC 450 0.0 14.576959 7 TCTTATA 165 4.820322E-10 14.551371 2 TCCTACA 760 0.0 14.532224 2 GTCCTAA 485 0.0 14.530338 1 ACCGTCG 410 0.0 14.438211 8 GTATATG 200 3.6379788E-12 14.414756 1 TTAGGAC 590 0.0 14.372073 3 AGGCCCG 720 0.0 14.222519 10 CTATTCC 725 0.0 14.121529 4 GTCCTAC 685 0.0 14.028959 1 CGTCGTA 400 0.0 14.000293 10 AACCGCG 355 0.0 13.9710455 7 CGTTTAT 450 0.0 13.866243 31 ACGTTTT 370 0.0 13.837416 29 CCTATTC 740 0.0 13.837059 3 GTATCAA 5720 0.0 13.748341 1 AACGAAT 210 7.2759576E-12 13.713867 31 >>END_MODULE