##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062741_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2849071 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14123551150533 32.0 32.0 32.0 32.0 32.0 2 31.207201926522714 32.0 32.0 32.0 32.0 32.0 3 31.338288515800414 32.0 32.0 32.0 32.0 32.0 4 31.453278981113492 32.0 32.0 32.0 32.0 32.0 5 31.359231833815304 32.0 32.0 32.0 32.0 32.0 6 34.886859611431234 36.0 36.0 36.0 36.0 36.0 7 34.9209661675683 36.0 36.0 36.0 36.0 36.0 8 34.85015501544188 36.0 36.0 36.0 32.0 36.0 9 34.979316766763624 36.0 36.0 36.0 36.0 36.0 10 34.80998543033852 36.0 36.0 36.0 32.0 36.0 11 35.01166696091463 36.0 36.0 36.0 36.0 36.0 12 34.902581578346066 36.0 36.0 36.0 32.0 36.0 13 34.955235232818 36.0 36.0 36.0 36.0 36.0 14 34.89806010450424 36.0 36.0 36.0 32.0 36.0 15 34.8589810503143 36.0 36.0 36.0 32.0 36.0 16 34.87316532301231 36.0 36.0 36.0 32.0 36.0 17 34.85009148596156 36.0 36.0 36.0 32.0 36.0 18 34.840460627341336 36.0 36.0 36.0 32.0 36.0 19 34.846018579389565 36.0 36.0 36.0 32.0 36.0 20 34.8301418251774 36.0 36.0 36.0 32.0 36.0 21 34.81707686470432 36.0 36.0 36.0 32.0 36.0 22 34.79120843250308 36.0 36.0 36.0 32.0 36.0 23 34.71924988882341 36.0 36.0 36.0 32.0 36.0 24 34.69852172866173 36.0 36.0 36.0 32.0 36.0 25 34.67588241921665 36.0 36.0 36.0 32.0 36.0 26 34.60646926664867 36.0 36.0 36.0 32.0 36.0 27 34.57963911745267 36.0 36.0 36.0 32.0 36.0 28 34.53656191790236 36.0 36.0 36.0 32.0 36.0 29 34.503885652551304 36.0 36.0 36.0 32.0 36.0 30 34.479538768953105 36.0 36.0 36.0 32.0 36.0 31 34.47009604183258 36.0 36.0 36.0 32.0 36.0 32 34.44253161820116 36.0 36.0 36.0 32.0 36.0 33 34.40020097779241 36.0 36.0 36.0 32.0 36.0 34 34.38577522287089 36.0 36.0 36.0 32.0 36.0 35 34.34338386091466 36.0 36.0 36.0 32.0 36.0 36 34.319386213962375 36.0 36.0 36.0 32.0 36.0 37 34.292487270412 36.0 36.0 36.0 32.0 36.0 38 33.85199596640449 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 11.0 21 56.0 22 196.0 23 669.0 24 1868.0 25 4581.0 26 9984.0 27 19139.0 28 34161.0 29 54350.0 30 83053.0 31 119824.0 32 172646.0 33 277596.0 34 661429.0 35 1409505.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.59068277806484 18.44089086334329 12.515690640936356 26.452735717655518 2 15.079652279637818 20.937210760981387 37.5957987708976 26.387338188483195 3 17.736413027263975 25.40242064869566 28.850035678296535 28.011130645743826 4 11.795141069186606 16.939323560061677 36.76857970497669 34.49695566577503 5 13.65449555626768 37.6167091776296 33.93125965008218 14.797535616020532 6 33.38122037186923 36.43471228816742 17.233612699740895 12.950454640222445 7 29.335911024720073 30.98315550281303 21.542606493858855 18.138326978608042 8 27.85144687558902 33.527436459306266 19.65239745440595 18.96871921069877 9 27.282220340059858 14.59724552987414 18.307359609739525 39.81317452032648 10 14.893116666274722 27.580824565178247 32.51329131451601 25.01276745403102 11 37.03859967370274 21.534706290348396 22.36863165757321 19.058062378375645 12 24.120762637501493 23.995001860262683 29.543042266572133 22.34119323566369 13 29.500980671574002 20.072177989433737 25.330388744670184 25.096452594322074 14 23.455856312461147 19.824918368127715 25.684161609170147 31.03506371024099 15 25.014750422155153 27.315956675000375 23.06843178004339 24.60086112280108 16 25.41766260569238 26.160922687052267 24.22927481599259 24.192139891262762 17 23.706008028581948 26.12342760148835 25.889877788233427 24.28068658169628 18 24.697805003806504 25.157253013350665 26.781501759696408 23.363440223146423 19 24.95027326451324 26.179445861475546 25.666471632332083 23.20380924167913 20 25.14012462307889 24.626799402331496 26.102929691818844 24.13014628277077 21 25.980486959073296 25.16327263397271 24.687889271898996 24.168351135054994 22 24.78719356645752 25.17925160087439 25.51234298374065 24.521211848927436 23 23.758355811467975 24.889463736348592 25.69930836958792 25.65287208259552 24 23.916006305213173 25.991244163448368 25.551556981205454 24.541192550133008 25 24.741468359335375 24.902608604699566 25.405860366414174 24.95006266955088 26 24.054963881208998 25.504769800401604 25.99134946092955 24.448916857459853 27 25.11314218323874 25.505305239955494 25.214719189068713 24.166833387737054 28 24.144115748607177 25.01945370964781 26.042032648537017 24.794397893207996 29 23.988801963868223 25.589534272750665 26.19639875594536 24.225265007435755 30 24.519185376566607 25.278450414187642 26.202962298938846 23.999401910306904 31 24.32006783965721 25.361319531875477 25.317621077186214 25.000991551281103 32 24.05854399556908 25.63895389058398 25.36546123280185 24.937040881045082 33 23.919340725450507 25.14637227362884 25.742110322978963 25.192176677941685 34 24.23172325294807 25.595360733375898 26.175269061388782 23.997646952287255 35 25.335732243948993 25.12117107646668 25.719927653610597 23.82316902597373 36 24.205328684332542 25.814028502624186 25.58749852144787 24.3931442915954 37 25.20007398903011 25.624142044898147 25.399612715864222 23.776171250207522 38 24.263961315082224 25.459720350753173 25.570598676269334 24.705719657895266 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 96.0 1 147.5 2 199.0 3 199.0 4 697.5 5 1196.0 6 1196.0 7 1528.5 8 1861.0 9 1988.0 10 2115.0 11 2115.0 12 2742.0 13 3369.0 14 4613.0 15 5857.0 16 5857.0 17 9098.0 18 12339.0 19 12339.0 20 15269.0 21 18199.0 22 21294.5 23 24390.0 24 24390.0 25 30460.5 26 36531.0 27 36531.0 28 46539.0 29 56547.0 30 67524.0 31 78501.0 32 78501.0 33 94711.0 34 110921.0 35 110921.0 36 123107.5 37 135294.0 38 152107.5 39 168921.0 40 168921.0 41 180078.0 42 191235.0 43 212160.5 44 233086.0 45 233086.0 46 251549.0 47 270012.0 48 270012.0 49 272167.0 50 274322.0 51 263091.5 52 251861.0 53 251861.0 54 238780.0 55 225699.0 56 225699.0 57 215827.0 58 205955.0 59 184240.5 60 162526.0 61 162526.0 62 150565.5 63 138605.0 64 115088.5 65 91572.0 66 91572.0 67 75797.5 68 60023.0 69 60023.0 70 48409.5 71 36796.0 72 28829.5 73 20863.0 74 20863.0 75 15661.0 76 10459.0 77 10459.0 78 9667.0 79 8875.0 80 6823.0 81 4771.0 82 4771.0 83 4397.0 84 4023.0 85 4023.0 86 2549.0 87 1075.0 88 895.5 89 716.0 90 716.0 91 434.0 92 152.0 93 106.0 94 60.0 95 60.0 96 47.0 97 34.0 98 34.0 99 24.5 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008388699333923234 2 0.0 3 0.0 4 2.807932831438739E-4 5 7.019832078596848E-5 6 1.754958019649212E-4 7 3.509916039298424E-4 8 0.002456941227508897 9 0.003580114360084392 10 0.0010529748117895272 11 0.004738386653052873 12 3.8609076432282667E-4 13 1.0529748117895271E-4 14 0.0 15 0.0 16 3.509916039298424E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 7.019832078596848E-5 22 1.0529748117895271E-4 23 2.1059496235790543E-4 24 0.0 25 0.0 26 0.0 27 3.509916039298424E-5 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 7.019832078596848E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2849071.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.905296326695364 #Duplication Level Percentage of deduplicated Percentage of total 1 69.45206233305797 32.576695642322015 2 16.30361619558167 15.294518977009359 3 6.271747086959473 8.825344667997674 4 2.948521030104022 5.532050105700888 5 1.5589401293943796 3.656127436241009 6 0.95279237921801 2.6814605331022716 7 0.5796124543709763 1.903082574883969 8 0.3850640076482717 1.4449233106789658 9 0.26706608617696304 1.1274132519847089 >10 1.119774335803901 8.997904469839819 >50 0.07503798877855508 2.453364628117252 >100 0.06935832739446492 7.035805699397134 >500 0.010612284482321065 3.4155655817310393 >1k 0.005569567742441576 4.253094035043901 >5k 2.2579328685573959E-4 0.8026490859501481 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 8310 0.291674022865699 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 7845 0.27535291328296135 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 6581 0.23098757454622929 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 4593 0.1612104436849766 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 3094 0.10859680225589324 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 3.509916039298424E-5 0.0 6 0.0 0.0 0.0 3.509916039298424E-5 0.0 7 0.0 0.0 0.0 3.509916039298424E-5 0.0 8 0.0 0.0 0.0 3.509916039298424E-5 0.0 9 0.0 0.0 0.0 1.0529748117895271E-4 0.0 10 0.0 0.0 0.0 1.0529748117895271E-4 0.0 11 0.0 0.0 0.0 1.4039664157193695E-4 0.0 12 0.0 0.0 0.0 1.754958019649212E-4 0.0 13 0.0 0.0 0.0 1.754958019649212E-4 0.0 14 0.0 0.0 0.0 2.1059496235790543E-4 0.0 15 0.0 0.0 0.0 3.1589244353685814E-4 0.0 16 0.0 0.0 0.0 4.2118992471581085E-4 0.0 17 0.0 0.0 0.0 5.264874058947636E-4 0.0 18 0.0 0.0 0.0 5.966857266807321E-4 0.0 19 0.0 0.0 0.0 7.019832078596848E-4 0.0 20 0.0 0.0 0.0 8.423798494316217E-4 0.0 21 0.0 0.0 0.0 9.476773306105745E-4 0.0 22 0.0 0.0 0.0 0.0011933714533614642 0.0 23 0.0 0.0 0.0 0.0022814454255439755 0.0 24 0.0 0.0 0.0 0.0030185277937966448 0.0 25 0.0 0.0 0.0 0.0038960068036212507 0.0 26 0.0 0.0 0.0 0.004808584973838841 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTAC 305 0.0 16.78859 1 CGTCGTA 500 0.0 16.32051 10 ATCGTTT 510 0.0 15.999377 29 TACCGTC 530 0.0 15.39806 7 ATACCGT 555 0.0 15.280829 6 ACCGTCG 515 0.0 15.225113 8 CTAGCGG 570 0.0 15.157306 29 CGTTTAT 555 0.0 14.990407 31 TACACCG 140 1.27947715E-8 14.858389 5 CCGTCGT 530 0.0 14.7936945 9 GTCGTAG 530 0.0 14.792915 11 TAGCGGC 595 0.0 14.520443 30 CATCGTT 540 0.0 14.517952 28 TGTACGG 80 0.0010179494 14.001174 5 TAGCGTA 450 0.0 13.868318 7 ATAGCGT 475 0.0 13.811927 6 AATAGCG 510 0.0 13.80508 5 CCGATAA 290 0.0 13.794261 9 TACGCTA 580 0.0 13.794261 9 TCTAGCG 605 0.0 13.751531 28 >>END_MODULE