##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062738_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 427900 Sequences flagged as poor quality 0 Sequence length 38 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.99953026408039 32.0 32.0 32.0 32.0 32.0 2 31.25281607852302 32.0 32.0 32.0 32.0 32.0 3 31.35740827296097 32.0 32.0 32.0 32.0 32.0 4 31.47191633559243 32.0 32.0 32.0 32.0 32.0 5 31.372748305678897 32.0 32.0 32.0 32.0 32.0 6 34.8673825660201 36.0 36.0 36.0 32.0 36.0 7 34.906466464127135 36.0 36.0 36.0 36.0 36.0 8 34.84752979668147 36.0 36.0 36.0 32.0 36.0 9 34.956728207525124 36.0 36.0 36.0 32.0 36.0 10 34.79711381163823 36.0 36.0 36.0 32.0 36.0 11 34.971035288618836 36.0 36.0 36.0 36.0 36.0 12 34.87056087870998 36.0 36.0 36.0 32.0 36.0 13 34.911341434914696 36.0 36.0 36.0 32.0 36.0 14 34.843680766534234 36.0 36.0 36.0 32.0 36.0 15 34.82693620004674 36.0 36.0 36.0 32.0 36.0 16 34.83818649217107 36.0 36.0 36.0 32.0 36.0 17 34.80692451507362 36.0 36.0 36.0 32.0 36.0 18 34.77515541014256 36.0 36.0 36.0 32.0 36.0 19 34.76596401028278 36.0 36.0 36.0 32.0 36.0 20 34.72742463192335 36.0 36.0 36.0 32.0 36.0 21 34.71285814442627 36.0 36.0 36.0 32.0 36.0 22 34.686735218509 36.0 36.0 36.0 32.0 36.0 23 34.60881748071979 36.0 36.0 36.0 32.0 36.0 24 34.58715354054686 36.0 36.0 36.0 32.0 36.0 25 34.56683337228324 36.0 36.0 36.0 32.0 36.0 26 34.49510399626081 36.0 36.0 36.0 32.0 36.0 27 34.46945548025239 36.0 36.0 36.0 32.0 36.0 28 34.430070109838745 36.0 36.0 36.0 32.0 36.0 29 34.36932928254265 36.0 36.0 36.0 32.0 36.0 30 34.32714652956298 36.0 36.0 36.0 32.0 36.0 31 34.30700630988549 36.0 36.0 36.0 32.0 36.0 32 34.24950923112877 36.0 36.0 36.0 32.0 36.0 33 34.17403832671185 36.0 36.0 36.0 32.0 36.0 34 34.14544753447067 36.0 36.0 36.0 32.0 36.0 35 34.083799953260105 36.0 36.0 36.0 32.0 36.0 36 34.03359196073849 36.0 36.0 36.0 32.0 36.0 37 33.987527459686845 36.0 36.0 36.0 32.0 36.0 38 33.53756718859547 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 3.0 20 5.0 21 11.0 22 46.0 23 144.0 24 360.0 25 864.0 26 1850.0 27 3506.0 28 6054.0 29 9356.0 30 14068.0 31 19675.0 32 27600.0 33 42092.0 34 96134.0 35 206131.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.535766204991326 18.593611958996124 13.124558853088145 24.746062982924403 2 14.835709277868661 22.00560878709979 37.39121290021033 25.76746903482122 3 17.680766534236973 27.13811638233232 28.876840383267115 26.304276700163587 4 11.691516709511568 17.464594531432578 35.49193736854405 35.35195139051181 5 13.421126431409208 37.932928254265015 32.63122224818883 16.01472306613695 6 32.32702109609978 36.27538274218916 17.466037546243392 13.931558615467669 7 28.328413948151315 31.73202087408477 21.761677405182063 18.177887772581848 8 28.523619332960966 32.08620887095078 19.96279426302493 19.42737753306333 9 28.12965226475462 14.190795147271567 18.585921852469017 39.093630735504796 10 16.30485841218798 27.164948574072735 30.85228454511249 25.677908468626796 11 36.54860534956823 21.812169157600756 22.094721712609697 19.54450378022132 12 24.895594521136996 24.706998614158948 28.78880296518571 21.608603899518343 13 30.14536106566955 20.14980135545688 25.458518345407803 24.246319233465762 14 24.4293059125964 20.12830100490769 25.898574433278803 29.54381864921711 15 25.381163823323206 26.578639869128303 24.6106566954896 23.429539612058893 16 24.74503388642206 25.889927553166626 25.309184388875906 24.055854171535408 17 23.122458518345407 25.608553400327178 26.68871231596167 24.580275765365737 18 24.66487497078757 23.847160551530735 28.638700630988552 22.84926384669315 19 24.663239074550127 25.522551998130403 27.312923580275765 22.5012853470437 20 25.289787333489134 23.070810937134844 28.07758822154709 23.561813507828933 21 26.994391212900208 24.11311053984576 25.384903014723065 23.507595232530964 22 25.099380928677096 24.254789097427196 26.39361157656363 24.252218397332083 23 23.136768256060424 23.966403286756922 27.079053701924988 25.817774755257666 24 23.42907221313391 26.0079457817247 26.75251226922178 23.810469735919607 25 24.64851600841318 24.017527459686843 26.667445664874972 24.666510867025007 26 23.375087637298435 25.109838747370883 27.6639401729376 23.85113344239308 27 24.887590558541714 24.92077588221547 26.739892498247254 23.45174106099556 28 23.464360831970087 24.401729376022434 27.730778219210094 24.40313157279738 29 23.123860715120355 24.97008646880112 28.155877541481654 23.75017527459687 30 23.778452909558307 24.90745501285347 28.05725636831035 23.25683570927787 31 23.49684505725637 25.154007945781725 26.58074316429072 24.768403832671186 32 23.149801355456884 25.565085300303807 26.645711614863288 24.639401729376022 33 23.200747838279973 24.718625847160553 27.104463659733586 24.976162654825895 34 23.54615564384202 25.242346342603412 27.71395185791073 23.497546155643843 35 25.144426267819586 24.861649918205188 27.147931759756954 22.845992054218275 36 23.636597335826128 26.025706940874038 26.551063332554335 23.786632390745503 37 24.7520448702968 26.070577237672353 26.4559476513204 22.721430240710447 38 23.565552699228792 25.659032484225285 26.562514606216403 24.212900210329515 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 793.0 1 504.5 2 216.0 3 216.0 4 667.0 5 1118.0 6 1118.0 7 1318.5 8 1519.0 9 1451.5 10 1384.0 11 1384.0 12 1675.5 13 1967.0 14 2226.5 15 2486.0 16 2486.0 17 3779.0 18 5072.0 19 5072.0 20 5382.0 21 5692.0 22 5091.5 23 4491.0 24 4491.0 25 4474.0 26 4457.0 27 4457.0 28 5987.0 29 7517.0 30 9219.5 31 10922.0 32 10922.0 33 13184.5 34 15447.0 35 15447.0 36 16191.0 37 16935.0 38 19577.0 39 22219.0 40 22219.0 41 23625.5 42 25032.0 43 29145.0 44 33258.0 45 33258.0 46 37727.5 47 42197.0 48 42197.0 49 41895.0 50 41593.0 51 39008.5 52 36424.0 53 36424.0 54 34081.5 55 31739.0 56 31739.0 57 30881.5 58 30024.0 59 26735.0 60 23446.0 61 23446.0 62 22859.5 63 22273.0 64 18360.5 65 14448.0 66 14448.0 67 12156.5 68 9865.0 69 9865.0 70 8023.5 71 6182.0 72 4800.5 73 3419.0 74 3419.0 75 2566.5 76 1714.0 77 1714.0 78 1746.0 79 1778.0 80 1371.5 81 965.0 82 965.0 83 917.0 84 869.0 85 869.0 86 542.0 87 215.0 88 189.0 89 163.0 90 163.0 91 97.5 92 32.0 93 22.0 94 12.0 95 12.0 96 11.0 97 10.0 98 10.0 99 8.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008880579574666978 2 0.0 3 0.0 4 0.0 5 0.0 6 2.3369946249123628E-4 7 2.3369946249123628E-4 8 0.0021032951624211263 9 0.003972890862351017 10 7.010983874737088E-4 11 0.003505491937368544 12 2.3369946249123628E-4 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 2.3369946249123628E-4 23 2.3369946249123628E-4 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 427900.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.826758626567326 #Duplication Level Percentage of deduplicated Percentage of total 1 80.11603805263246 42.322706043232984 2 12.782236899044358 13.504882867468373 3 3.420631694334855 5.421026546010403 4 1.2767634281843938 2.697890937757024 5 0.5826733151486577 1.539037128874997 6 0.3175541437584434 1.006521366191613 7 0.2125082186895835 0.7858284262413489 8 0.14700420438128312 0.6212604497552492 9 0.10438269971269852 0.4962779714260966 >10 0.7649956658648751 8.259423462332519 >50 0.14559585558968074 5.4146685141433375 >100 0.11985024697897065 12.402313356391542 >500 0.007102236858013076 2.199540542313342 >1k 0.002663338821754903 3.3286223878611825 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3825 0.8939004440289787 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2962 0.6922178078990419 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 2264 0.5290955830801589 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 2172 0.5075952325309652 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1726 0.40336527225987384 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1246 0.2911895302640804 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 849 0.19841084365505962 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 789 0.18438887590558542 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 611 0.14279037158214536 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 610 0.14255667211965412 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 590 0.13788268286982938 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 588 0.13741528394484692 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 571 0.13344239308249592 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 566 0.13227389577003973 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 555 0.12970320168263613 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 546 0.127599906520215 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 537 0.12549661135779389 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTA 531 0.12409441458284647 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 512 0.11965412479551298 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 509 0.11895302640803926 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 509 0.11895302640803926 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 507 0.11848562748305677 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 489 0.11427903715821454 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATG 488 0.11404533769572331 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAA 476 0.11124094414582845 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 470 0.10983874737088103 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 462 0.10796915167095116 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 457 0.10680065435849496 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 455 0.1063332554335125 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAA 447 0.1044636597335826 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 445 0.10399626080860014 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 444 0.10376256134610891 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 438 0.10236036457116149 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGT 438 0.10236036457116149 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 432 0.10095816779621407 No Hit GAATAATTGCAATCCCCGATCCCCATCACGAATGGGGT 430 0.1004907688712316 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTC 429 0.10025706940874037 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAA 428 0.10002336994624914 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 2.3369946249123628E-4 7 0.0 0.0 0.0 0.0 2.3369946249123628E-4 8 0.0 0.0 0.0 0.0 2.3369946249123628E-4 9 0.0 0.0 0.0 0.0 2.3369946249123628E-4 10 0.0 0.0 0.0 0.0 2.3369946249123628E-4 11 0.0 0.0 0.0 0.0 2.3369946249123628E-4 12 0.0 0.0 0.0 0.0 4.6739892498247256E-4 13 0.0 0.0 0.0 0.0 4.6739892498247256E-4 14 0.0 0.0 0.0 0.0 4.6739892498247256E-4 15 0.0 0.0 0.0 2.3369946249123628E-4 4.6739892498247256E-4 16 0.0 0.0 0.0 2.3369946249123628E-4 4.6739892498247256E-4 17 0.0 0.0 0.0 4.6739892498247256E-4 4.6739892498247256E-4 18 0.0 0.0 0.0 4.6739892498247256E-4 4.6739892498247256E-4 19 0.0 0.0 0.0 4.6739892498247256E-4 4.6739892498247256E-4 20 0.0 0.0 0.0 4.6739892498247256E-4 7.010983874737088E-4 21 0.0 0.0 0.0 0.0014021967749474175 9.347978499649451E-4 22 0.0 0.0 0.0 0.0023369946249123625 9.347978499649451E-4 23 0.0 0.0 0.0 0.007712082262210797 9.347978499649451E-4 24 0.0 0.0 0.0 0.012152372049544287 9.347978499649451E-4 25 0.0 0.0 0.0 0.013554568824491704 9.347978499649451E-4 26 0.0 0.0 0.0 0.016125262911895304 9.347978499649451E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCTTAC 35 0.0020644346 22.857143 1 TCTAGCG 125 0.0 20.48 28 TATGGCG 95 1.715307E-9 20.210526 16 ACTGCAC 40 0.0044789617 20.0 8 GGTCGTA 40 0.0044789617 20.0 29 GTAGGAC 65 9.411142E-6 19.692308 3 AACGAAT 50 7.1858417E-4 19.200003 31 TAGCGGC 140 1.8189894E-12 18.285715 30 ATATGGC 175 0.0 18.285715 15 ATAACGA 80 2.7878687E-6 18.0 12 GGCGAGA 45 0.008841454 17.777779 19 TAAGCTG 45 0.008841454 17.777779 5 CTAGCGG 145 3.6379788E-12 17.655172 29 TGGCGAG 100 6.784467E-8 17.600002 18 GAAAATC 75 3.2260334E-5 17.066668 31 AGCGGCG 160 1.8189894E-12 17.0 31 AATATGG 170 0.0 16.941177 14 ATCGTTT 95 7.6646756E-7 16.842106 29 ATGGCGA 115 1.8313585E-8 16.695652 17 GATATAC 115 1.8313585E-8 16.695652 1 >>END_MODULE