##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062736_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 197008 Sequences flagged as poor quality 0 Sequence length 38 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.389755745959555 32.0 32.0 32.0 27.0 32.0 2 31.23674165516121 32.0 32.0 32.0 32.0 32.0 3 31.34683363112158 32.0 32.0 32.0 32.0 32.0 4 31.502720701697392 32.0 32.0 32.0 32.0 32.0 5 31.36761451311622 32.0 32.0 32.0 32.0 32.0 6 34.81946926013157 36.0 36.0 36.0 32.0 36.0 7 34.89114655242427 36.0 36.0 36.0 36.0 36.0 8 34.88891821651912 36.0 36.0 36.0 36.0 36.0 9 34.919246934134655 36.0 36.0 36.0 32.0 36.0 10 34.80509928530821 36.0 36.0 36.0 32.0 36.0 11 34.96345833671729 36.0 36.0 36.0 36.0 36.0 12 34.87101539023796 36.0 36.0 36.0 32.0 36.0 13 34.85089437992366 36.0 36.0 36.0 32.0 36.0 14 34.782922520912855 36.0 36.0 36.0 32.0 36.0 15 34.77110574189881 36.0 36.0 36.0 32.0 36.0 16 34.72244274344189 36.0 36.0 36.0 32.0 36.0 17 34.691032851457805 36.0 36.0 36.0 32.0 36.0 18 34.64184195565662 36.0 36.0 36.0 32.0 36.0 19 34.624791886623896 36.0 36.0 36.0 32.0 36.0 20 34.541673434581334 36.0 36.0 36.0 32.0 36.0 21 34.43005867782019 36.0 36.0 36.0 32.0 36.0 22 34.39190794282466 36.0 36.0 36.0 32.0 36.0 23 34.25815195322017 36.0 36.0 36.0 32.0 36.0 24 34.29977462844148 36.0 36.0 36.0 32.0 36.0 25 34.21728051652725 36.0 36.0 36.0 32.0 36.0 26 34.0789003492244 36.0 36.0 36.0 32.0 36.0 27 34.01617193210428 36.0 36.0 36.0 32.0 36.0 28 33.88658328595793 36.0 36.0 36.0 32.0 36.0 29 33.83194591082596 36.0 36.0 36.0 32.0 36.0 30 33.74287338585235 36.0 36.0 36.0 32.0 36.0 31 33.621746325022336 36.0 36.0 36.0 27.0 36.0 32 33.55844940306993 36.0 36.0 36.0 27.0 36.0 33 33.35203646552424 36.0 36.0 36.0 21.0 36.0 34 33.20894075367498 36.0 36.0 36.0 14.0 36.0 35 32.95845853975473 36.0 36.0 36.0 14.0 36.0 36 32.85219889547633 36.0 36.0 36.0 14.0 36.0 37 32.658623000081214 36.0 36.0 36.0 14.0 36.0 38 32.18103325753269 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 5.0 21 4.0 22 16.0 23 72.0 24 234.0 25 558.0 26 1219.0 27 2201.0 28 3940.0 29 6177.0 30 9147.0 31 12190.0 32 16254.0 33 22711.0 34 43544.0 35 78736.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 49.49668262324042 16.658459945277244 14.043646220931707 19.80121121055063 2 12.736538617721108 23.377730853569396 37.36142694712905 26.524303581580444 3 20.140806464712092 32.46771704702347 26.264923251847637 21.126553236416797 4 11.66106616042151 17.641594672243485 32.05486127326071 38.64247789407429 5 11.175688296921953 40.781085032079915 31.107366198326968 16.93586047267116 6 30.026191829773406 32.951453748071145 19.942844960610735 17.07950946154471 7 25.73499553317632 33.345346381872815 22.00672053926744 18.912937545683427 8 32.682575215354234 27.482601611159335 20.69177313820742 19.143050035279007 9 29.875482865569207 14.31363292572119 18.508535489667565 37.30234871904203 10 18.115184309107338 28.03467914682802 29.726505791701776 24.123630752362875 11 34.42996593856759 24.098336522891213 18.766783250506354 22.704914288034843 12 24.05841387151791 26.61313246162592 28.999329976447658 20.32912369040851 13 34.878786648257936 21.757492081539837 24.848229513522295 18.515491756679932 14 27.543043937302038 17.954600828392756 27.490761796475272 27.011593437829934 15 27.108036221879317 22.680297246812312 32.2281328677008 17.98353366360757 16 23.77365386177211 25.600483229107446 28.8785226995858 21.747340209534638 17 21.127060830017054 24.04521643791115 31.39161861447251 23.436104117599285 18 23.816799317794203 21.128076017217577 35.22547307723544 19.82965158775278 19 21.448875172581825 29.12419800211159 31.843884512304072 17.583042313002515 20 23.178754162267523 19.376370502720704 38.38828880045481 19.05658653455697 21 24.658897100625353 23.931007877852675 28.321692520100704 23.088402501421264 22 21.933627060830016 24.690367903841466 30.46830585559977 22.90769917972874 23 20.289531389588237 25.226894339316168 30.10385365061317 24.379720620482416 24 19.24033541785105 28.75466986112239 30.61956874847722 21.38542597254934 25 24.53605944936246 23.0107406805815 28.908978315601395 23.54422155445464 26 19.599711686835054 23.212255339884674 32.3433566149598 24.844676358320473 27 24.058921465118168 26.421262080727686 31.71140258263624 17.80841387151791 28 21.947839681637294 22.55796718914968 31.951494355559163 23.54269877365386 29 19.098716803378544 26.785714285714285 34.8742183058556 19.241350605051572 30 23.87821814342565 23.984305205879963 33.2214935434094 18.915983107284983 31 18.583509299114755 25.973056931698206 31.85302119710875 23.590412572078293 32 18.658633151953218 27.39685698042719 32.27533907252497 21.669170795094615 33 19.218001299439617 26.74053845529116 31.30025176642573 22.7412084788435 34 18.056119548444734 28.197332088037037 33.6859416876472 20.060606675871032 35 22.020425566474458 26.953220173800048 31.39161861447251 19.634735645252984 36 21.212844148460977 28.56787541622675 31.132745878339968 19.086534556972307 37 22.454418094696663 28.87395435718346 30.909912287825875 17.761715260293997 38 20.489523268090636 29.468854056688055 28.354178510517343 21.68744416470397 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 146.0 1 159.5 2 173.0 3 173.0 4 684.5 5 1196.0 6 1196.0 7 1535.5 8 1875.0 9 1916.0 10 1957.0 11 1957.0 12 2277.5 13 2598.0 14 2948.0 15 3298.0 16 3298.0 17 4777.5 18 6257.0 19 6257.0 20 6537.5 21 6818.0 22 5242.5 23 3667.0 24 3667.0 25 2742.5 26 1818.0 27 1818.0 28 2617.5 29 3417.0 30 4452.0 31 5487.0 32 5487.0 33 4826.5 34 4166.0 35 4166.0 36 4367.5 37 4569.0 38 5557.5 39 6546.0 40 6546.0 41 7842.0 42 9138.0 43 11469.5 44 13801.0 45 13801.0 46 25148.0 47 36495.0 48 36495.0 49 30480.5 50 24466.0 51 18279.5 52 12093.0 53 12093.0 54 10365.0 55 8637.0 56 8637.0 57 8458.5 58 8280.0 59 7870.5 60 7461.0 61 7461.0 62 6938.5 63 6416.0 64 5943.0 65 5470.0 66 5470.0 67 4773.5 68 4077.0 69 4077.0 70 3521.5 71 2966.0 72 2372.5 73 1779.0 74 1779.0 75 1424.5 76 1070.0 77 1070.0 78 826.0 79 582.0 80 399.0 81 216.0 82 216.0 83 132.0 84 48.0 85 48.0 86 30.0 87 12.0 88 10.0 89 8.0 90 8.0 91 4.5 92 1.0 93 1.0 94 1.0 95 1.0 96 1.5 97 2.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0076139040038983195 2 0.0 3 0.0 4 0.0010151872005197758 5 0.0 6 0.0 7 0.0 8 0.003553155201819215 9 0.003553155201819215 10 0.0010151872005197758 11 0.0055835296028587675 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 197008.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.335580281003814 #Duplication Level Percentage of deduplicated Percentage of total 1 68.96792579347341 25.059896044830666 2 15.193339293696914 11.041175992853082 3 6.381314260169871 6.956062697961504 4 3.2591081805990165 4.736863477625274 5 1.887293249888243 3.4287947697555428 6 1.1259499329459097 2.454722650856818 7 0.7320071524362987 1.861853325753269 8 0.4945239159588735 1.4375050759360026 9 0.37298837729101475 1.2197474214245108 >10 1.3382878855610192 8.6011735564038 >50 0.1019780956638355 2.651668967757655 >100 0.10756593652212784 8.14840006497198 >500 0.019557443004023248 5.0744132217981 >1k 0.013969602145730889 9.227544059124503 >5k 0.004190880643719267 8.100178672947292 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5515 2.799378705433282 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 5321 2.7009055469828636 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 5122 2.599894420531146 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3977 2.0186997482335745 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2368 1.2019816454154146 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 2175 1.1040160805652561 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1799 0.9131608868675385 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 1718 0.8720458052464874 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTC 1415 0.7182449443677413 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 1239 0.6289084707220011 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATG 1228 0.6233249411191424 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 1137 0.5771339234954925 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTA 1123 0.5700276130918541 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 979 0.4969341346544303 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACG 915 0.46444814423779746 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAA 818 0.4152115650125883 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 779 0.3954154146024527 No Hit ACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGT 752 0.3817103873954357 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 709 0.3598838625842605 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAA 689 0.3497319905790628 No Hit GTACATGGGAGTGGTATCAACGCAAAAAAAAAAAAAAA 658 0.33399658897100626 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 654 0.33196621456996667 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 654 0.33196621456996667 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC 649 0.32942824656866726 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGC 625 0.31724600016242993 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAA 605 0.3070941281572322 No Hit ACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGT 511 0.25938032973280273 No Hit CAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTAT 489 0.2482132705270852 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 473 0.24009177292292702 No Hit ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAA 446 0.22638674571591003 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 440 0.22334118411435067 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACG 420 0.21318931210915293 No Hit GGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 409 0.20760578250629416 No Hit ATACCACTGCTTCCATGTACTCTGCGTTGATACCACTG 402 0.20405262730447496 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 379 0.19237797449849753 No Hit GAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAA 347 0.1761349792901811 No Hit GGTATCAACGCAGAGTACATGGGGTGGTATCAACGCAA 337 0.17105904328758223 No Hit CCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTT 336 0.17055144968732233 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT 325 0.16496792008446357 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 315 0.1598919840818647 No Hit CAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 305 0.1548160480792658 No Hit CTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 280 0.14212620807276863 No Hit GTATCAACGCAGAGTACATGGGAGTGGTATCAACGCAA 280 0.14212620807276863 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGG 277 0.14060342727198893 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAA 277 0.14060342727198893 No Hit GTATCAACGCAGAGTACATGGGTGGTATCAACGCAAAA 250 0.12689840006497197 No Hit TATCAACGCAGAGTACATGGGAGTGGTATCAACGCAAA 238 0.12080727686185333 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCA 232 0.117761715260294 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 226 0.11471615365873467 No Hit ACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAG 223 0.11319337285795501 No Hit GCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTAC 220 0.11167059205717533 No Hit GATACCACTGCTTCCATGTACTCTGCGTTGATACCACT 214 0.10862503045561603 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG 211 0.10710224965483635 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTT 209 0.10608706245431657 No Hit GTACATGGGGTATCAACGCAAAAAAAAAAAAAAAAAAA 208 0.10557946885405668 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG 208 0.10557946885405668 No Hit TATCAACGCAGAGTACATGGGTGGTATCAACGCAAAAA 206 0.10456428165353691 No Hit GTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 206 0.10456428165353691 No Hit TGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 204 0.10354909445301713 No Hit GTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCA 203 0.10304150085275726 No Hit ACGCAGAGTACATGGGAGTGGTATCAACGCAAAAAAAA 198 0.1005035328514578 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 5.075936002598879E-4 0.0 3 0.0 0.0 0.0 5.075936002598879E-4 0.0 4 0.0 0.0 0.0 5.075936002598879E-4 0.0 5 0.0 0.0 0.0 0.0010151872005197758 0.0 6 0.0 0.0 0.0 0.0010151872005197758 0.0 7 0.0 0.0 0.0 0.0010151872005197758 0.0 8 0.0 0.0 0.0 0.0010151872005197758 0.0 9 0.0 0.0 0.0 0.0015227808007796638 0.0 10 0.0 0.0 0.0 0.0015227808007796638 0.0 11 0.0 0.0 0.0 0.0015227808007796638 0.0 12 0.0 0.0 0.0 0.0020303744010395515 0.0 13 0.0 0.0 0.0 0.0020303744010395515 0.0 14 0.0 0.0 0.0 0.0020303744010395515 0.0 15 0.0 0.0 0.0 0.0020303744010395515 0.0 16 0.0 0.0 0.0 0.0020303744010395515 0.0 17 0.0 0.0 0.0 0.0020303744010395515 0.0 18 0.0 0.0 0.0 0.0025379680012994395 0.0 19 0.0 0.0 0.0 0.0025379680012994395 0.0 20 0.0 0.0 0.0 0.0025379680012994395 0.0 21 0.0 0.0 0.0 0.0030455616015593275 0.0 22 0.0 0.0 0.0 0.007613904003898319 0.0 23 0.0 0.0 0.0 0.018780963209615854 0.0 24 0.0 0.0 0.0 0.030455616015593275 0.0 25 0.0 0.0 0.0 0.03756192641923171 0.0 26 0.0 0.0 0.0 0.047713798424429466 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGAGT 25 2.8864102E-4 32.0 4 ACTGATT 50 2.7824426E-5 22.4 24 CATTGTT 40 0.0044705328 20.0 7 CATGTAA 40 0.0044705328 20.0 32 ATACATG 80 1.2522287E-7 20.0 1 CACCACA 40 0.0044705328 20.0 2 ACATTGT 50 7.167022E-4 19.2 6 CCACTGA 50 7.167022E-4 19.2 22 AAAAGTA 90 4.3214823E-7 17.777779 2 GCACCGA 45 0.008824999 17.777779 6 GCCAGCA 45 0.008824999 17.777779 2 CCAGCAC 85 4.941814E-6 16.941177 3 AAAAAGT 95 7.6131437E-7 16.842106 1 AAGTACT 130 4.7184585E-9 16.0 4 TGGGTGT 60 0.0024322793 16.0 6 TGTACTA 80 5.583042E-5 16.0 32 AGTACTC 110 1.9943946E-7 16.0 5 CACTGAT 75 6.2118785E-4 14.933333 23 AAAGTAC 120 5.3504846E-7 14.666667 3 TACTCTG 2425 0.0 12.8 7 >>END_MODULE