##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062735_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6078519 Sequences flagged as poor quality 0 Sequence length 38 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.237349591240893 32.0 32.0 32.0 32.0 32.0 2 31.34740699173598 32.0 32.0 32.0 32.0 32.0 3 31.422987079583038 32.0 32.0 32.0 32.0 32.0 4 31.488512909147772 32.0 32.0 32.0 32.0 32.0 5 31.420737518464612 32.0 32.0 32.0 32.0 32.0 6 34.92073398141883 36.0 36.0 36.0 36.0 36.0 7 34.964416990388614 36.0 36.0 36.0 36.0 36.0 8 34.89371374836535 36.0 36.0 36.0 36.0 36.0 9 35.00680165678515 36.0 36.0 36.0 36.0 36.0 10 34.89946136550696 36.0 36.0 36.0 32.0 36.0 11 35.040414285124385 36.0 36.0 36.0 36.0 36.0 12 34.98151539873446 36.0 36.0 36.0 36.0 36.0 13 35.00620792663476 36.0 36.0 36.0 36.0 36.0 14 34.9564370860731 36.0 36.0 36.0 36.0 36.0 15 34.934219832166356 36.0 36.0 36.0 36.0 36.0 16 34.94666019798573 36.0 36.0 36.0 36.0 36.0 17 34.923849049414834 36.0 36.0 36.0 36.0 36.0 18 34.92063790538452 36.0 36.0 36.0 32.0 36.0 19 34.88658618982683 36.0 36.0 36.0 32.0 36.0 20 34.87381350621755 36.0 36.0 36.0 32.0 36.0 21 34.86599647052185 36.0 36.0 36.0 32.0 36.0 22 34.866528014471946 36.0 36.0 36.0 32.0 36.0 23 34.82321680659384 36.0 36.0 36.0 32.0 36.0 24 34.75789234186814 36.0 36.0 36.0 32.0 36.0 25 34.74303658506291 36.0 36.0 36.0 32.0 36.0 26 34.6737053877762 36.0 36.0 36.0 32.0 36.0 27 34.68511013949286 36.0 36.0 36.0 32.0 36.0 28 34.6508027695562 36.0 36.0 36.0 32.0 36.0 29 34.5770104527106 36.0 36.0 36.0 32.0 36.0 30 34.57679592677098 36.0 36.0 36.0 32.0 36.0 31 34.52835353480017 36.0 36.0 36.0 32.0 36.0 32 34.56047007502979 36.0 36.0 36.0 32.0 36.0 33 34.515079248744634 36.0 36.0 36.0 32.0 36.0 34 34.46548361533459 36.0 36.0 36.0 32.0 36.0 35 34.44889207387523 36.0 36.0 36.0 32.0 36.0 36 34.39657900222077 36.0 36.0 36.0 32.0 36.0 37 34.43418964389188 36.0 36.0 36.0 32.0 36.0 38 34.07406623225164 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 3.0 19 11.0 20 53.0 21 157.0 22 489.0 23 1467.0 24 3817.0 25 9753.0 26 20644.0 27 40042.0 28 69446.0 29 109724.0 30 165221.0 31 237995.0 32 338756.0 33 537511.0 34 1322091.0 35 3221339.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.59963474526773 22.94666787321383 13.15310260860981 22.300594772908628 2 14.121698743015978 22.216023708410503 40.313889010446296 23.34838853812722 3 16.147123995170535 29.13969669256607 30.913533378772033 23.799645933491366 4 10.997881552164044 16.18813633018766 39.247515878487924 33.56646623916038 5 13.82248561984537 37.49507281053467 32.85566740303061 15.826774166589344 6 30.002671706496592 40.81156704140751 16.8314712548071 12.35428999728881 7 25.842363533586948 33.91550075248927 23.80476934081677 16.437366373107015 8 26.53849096181134 34.702350545992964 20.835091615769016 17.924066876426675 9 25.7395654845585 13.777089350332702 22.1214606470761 38.361884518032696 10 15.945330258652557 27.554021468914097 30.813759991629464 25.68688828080388 11 35.96190528210735 25.364835548840137 21.075519173547246 17.59773999550526 12 21.89558279180719 26.57191741383565 32.413654684543886 19.118845109813275 13 26.515303690827725 25.005095828724876 27.400735806410164 21.078864674037234 14 21.83400265755524 19.669659665454695 27.70645283826537 30.789884838724696 15 25.78955498864115 27.81866767217475 23.120977330168746 23.270800009015353 16 25.188808388625056 30.25821923340841 22.865182412091634 21.687789965874902 17 19.740894122400537 28.3042300270839 28.877692082561556 23.077183767954004 18 21.043431796462265 30.051793866236164 27.490841107842222 21.413933229459346 19 23.98539841694992 24.860529349336574 28.02815949082334 23.12591274289017 20 26.32637983035012 26.118417989645177 25.638070720844997 21.917131459159705 21 26.747570251990986 25.604461355749784 25.772841408035617 21.875126984223602 22 24.10923585473233 26.959207319811725 27.98587221192274 20.945684613533203 23 23.12782624818027 28.08305457802234 27.167056921360157 21.622062252437235 24 23.41440406783297 26.06840580740144 26.922001888946962 23.595188235818625 25 24.25485451947031 26.657367240102058 25.382252331204135 23.705525909223493 26 24.53288778613471 27.499433250012583 25.8061257694721 22.161553194380605 27 21.908894494426516 27.934068743457484 28.671897222231816 21.48513953988418 28 21.262267996530078 28.620573531151255 27.87683973678457 22.2403187355341 29 22.697996008567216 25.66223779180422 27.778032774101717 23.861733425526843 30 23.593641806499246 26.574466576480226 26.731626568906012 23.100265048114515 31 24.822855698896394 27.97359027750016 23.86099311361863 23.342560909984815 32 21.282832216202664 26.983612291086033 27.998053473222672 23.735502019488628 33 22.008124018366974 27.725585788248747 28.27274209392123 21.99354809946304 34 22.32626072238978 25.02622760577042 29.402622579611908 23.244889092227893 35 23.724611208750026 25.776706464189715 26.318976711267993 24.17970561579227 36 24.525464179679293 27.380945917911916 25.389934620587677 22.703655281821113 37 22.6145875335752 26.5442947533766 27.290019164207596 23.5510985488406 38 21.891872950568857 28.626658217235917 27.848672274614394 21.63279655758083 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 19.0 1 116.0 2 213.0 3 213.0 4 814.0 5 1415.0 6 1415.0 7 2162.0 8 2909.0 9 3890.5 10 4872.0 11 4872.0 12 8126.0 13 11380.0 14 17341.5 15 23303.0 16 23303.0 17 35391.5 18 47480.0 19 47480.0 20 61786.0 21 76092.0 22 89849.0 23 103606.0 24 103606.0 25 122285.5 26 140965.0 27 140965.0 28 157778.5 29 174592.0 30 198610.0 31 222628.0 32 222628.0 33 259064.0 34 295500.0 35 295500.0 36 371956.5 37 448413.0 38 496648.0 39 544883.0 40 544883.0 41 543933.5 42 542984.0 43 542484.0 44 541984.0 45 541984.0 46 543395.5 47 544807.0 48 544807.0 49 498654.5 50 452502.0 51 425266.5 52 398031.0 53 398031.0 54 362318.0 55 326605.0 56 326605.0 57 287939.0 58 249273.0 59 243359.0 60 237445.0 61 237445.0 62 210148.5 63 182852.0 64 164342.5 65 145833.0 66 145833.0 67 133052.5 68 120272.0 69 120272.0 70 104969.5 71 89667.0 72 79659.0 73 69651.0 74 69651.0 75 54111.0 76 38571.0 77 38571.0 78 28989.0 79 19407.0 80 15747.5 81 12088.0 82 12088.0 83 8375.0 84 4662.0 85 4662.0 86 3351.0 87 2040.0 88 1419.0 89 798.0 90 798.0 91 549.0 92 300.0 93 237.0 94 174.0 95 174.0 96 197.5 97 221.0 98 221.0 99 151.5 100 82.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009360832794962063 2 1.6451375738070407E-5 3 0.0 4 1.974165088568449E-4 5 4.935412721421123E-5 6 1.1515963016649287E-4 7 4.44187144927901E-4 8 0.0023689981062821387 9 0.004178649437469884 10 9.212770413319429E-4 11 0.004951864097159192 12 3.125761390233378E-4 13 2.9612476328526733E-4 14 0.0 15 0.0 16 3.290275147614081E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 1.3161100590456325E-4 22 3.290275147614081E-5 23 1.6451375738070408E-4 24 0.0 25 1.3161100590456325E-4 26 1.6451375738070407E-5 27 9.870825442842245E-5 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 4.935412721421123E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 6078519.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.67490705045078 #Duplication Level Percentage of deduplicated Percentage of total 1 55.686414838977086 12.626842804466484 2 14.973163002399922 6.790301586613334 3 7.821789502778224 5.320750498310637 4 4.852904457979929 4.401566300376524 5 3.37629424702837 3.8278579113169995 6 2.3900438972410822 3.251641392986321 7 1.837568640720376 2.916668868901039 8 1.4016110535536188 2.5425120288170158 9 1.079909500943336 2.203816280110995 >10 5.963982315850656 23.483089280967288 >50 0.31281096570208816 4.934368163812711 >100 0.2534124683354571 11.653541157322671 >500 0.03039152261521267 4.743124561243054 >1k 0.01781320494199774 7.4906694121259445 >5k 0.0015268461378847309 2.560229920295982 >10k+ 3.6353479473445966E-4 1.2530198323331454 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACATGGGCAGAAATCACATTGCG 20282 0.333666802719544 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 16419 0.2701151382433781 No Hit ATGTAGATAAGGGAAGTCGGCAAAATAGATCCGTAACT 15240 0.250718966248193 No Hit TATCAACGCAGAGTACATGGGCAGAAATCACATTGCGT 13588 0.22354129352890073 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 10475 0.17232816085628752 No Hit GTTTTAATTAGACAGTCAGATTCCCCTTGTCCGTACCA 9647 0.15870642174516522 No Hit ACTTAGAACTGGTACGGACAAGGGGAATCTGACTGTCT 9603 0.1579825612126901 No Hit TCGCAATGCTATGTTTTAATTAGACAGTCAGATTCCCC 9549 0.15709418692283433 No Hit ACGCAGAGTACATGGGCAGAAATCACATTGCGTCAACA 9128 0.15016815773710668 No Hit CCCTTAGAGCCAATCCTTTTCCCGAAGTTACGGATCTA 8566 0.14092248457231113 No Hit AGATAAGGGAAGTCGGCAAAATAGATCCGTAACTTCGG 8243 0.13560869020891436 No Hit ACTAGAGGCTGTTCACCTTGGAGACCTGCTGCGGTTAT 8204 0.13496708655512962 No Hit TATCTACATTGTTCTATCAACTAGAGGCTGTTCACCTT 8057 0.13254873432163328 No Hit GCCTCTAGTTGATAGAACAATGTAGATAAGGGAAGTCG 7621 0.12537593449983458 No Hit GTCAGATTCCCCTTGTCCGTACCAGTTCTAAGTTGGTT 7490 0.12322080427814736 No Hit TGATAGAACAATGTAGATAAGGGAAGTCGGCAAAATAG 7397 0.1216908263345068 No Hit ATTCCATTCCATTCCATTCCATTCCATTCCATTCCATT 7315 0.12034181352398503 No Hit GTTCTAAGTTGGTTGTTAAACGTACGCCGGACGGCCGA 7265 0.11951924473708152 No Hit CCTTTGTGCTGTCCGGTGCGCTCTCGACGACCCTTGAA 6711 0.11040518257819051 No Hit GAACAATGTAGATAAGGGAAGTCGGCAAAATAGATCCG 6482 0.10663781753417238 No Hit GGTATCAACGCAGAGTACATGGGCAGAAATCACATTGC 6362 0.10466365244560394 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.290275147614081E-5 0.0 2 0.0 0.0 0.0 3.290275147614081E-5 0.0 3 0.0 0.0 0.0 3.290275147614081E-5 0.0 4 0.0 0.0 0.0 3.290275147614081E-5 0.0 5 0.0 0.0 0.0 3.290275147614081E-5 0.0 6 0.0 0.0 0.0 3.290275147614081E-5 0.0 7 0.0 0.0 0.0 3.290275147614081E-5 0.0 8 0.0 0.0 0.0 3.290275147614081E-5 0.0 9 0.0 0.0 0.0 4.935412721421123E-5 0.0 10 0.0 0.0 0.0 4.935412721421123E-5 0.0 11 0.0 0.0 0.0 4.935412721421123E-5 0.0 12 0.0 0.0 0.0 6.580550295228163E-5 0.0 13 0.0 0.0 0.0 6.580550295228163E-5 0.0 14 0.0 0.0 0.0 1.4806238164263367E-4 0.0 15 0.0 0.0 0.0 1.809651331187745E-4 0.0 16 0.0 0.0 0.0 3.125761390233378E-4 0.0 17 0.0 0.0 0.0 3.125761390233378E-4 0.0 18 0.0 0.0 0.0 4.2773576918983064E-4 0.0 19 0.0 0.0 0.0 4.606385206659714E-4 0.0 20 0.0 0.0 0.0 7.074091567370275E-4 0.0 21 0.0 0.0 0.0 7.896660354273796E-4 0.0 22 0.0 0.0 0.0 9.212770413319428E-4 0.0 23 0.0 0.0 0.0 0.0011844990531410693 0.0 24 0.0 0.0 0.0 0.0015793320708547593 0.0 25 0.0 0.0 0.0 0.001891908209878097 0.0 26 0.0 0.0 0.0 0.002336095354805998 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5445 0.0 23.30479 1 GTATCAA 17300 0.0 21.653355 1 GTCTAGG 560 0.0 18.002068 1 TCTAGGA 675 0.0 16.593407 2 GACCCGC 650 0.0 15.50705 32 TCCGTGC 1265 0.0 15.432222 8 CTAGGAC 1205 0.0 15.403878 3 CGGACGG 3705 0.0 15.329999 28 CGTGCCA 1315 0.0 15.209122 10 TACGCCG 2175 0.0 15.153522 23 AGTCCGT 1635 0.0 14.680465 6 TGCGCTA 800 0.0 14.599996 10 CCTAGAC 520 0.0 14.462844 3 CTAGACC 145 2.0327207E-8 14.346122 4 AGGACGC 660 0.0 14.304791 5 GGACCGT 370 0.0 14.271793 6 TTAGAAC 2730 0.0 14.125816 3 GCCGGAC 4180 0.0 14.123817 26 AGGTCGC 525 0.0 14.020543 6 ATCAACG 27645 0.0 13.671699 3 >>END_MODULE