FastQCFastQC Report
Thu 2 Feb 2017
SRR4062732_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4062732_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7739808
Sequences flagged as poor quality0
Sequence length38
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATCAA67500.021.7610651
GGTATCA22900.019.3546561
CGTAACG805.629853E-515.99923114
TCTAGCG13450.014.39336128
ACCGTCG12150.014.2242968
TCAACGC102650.014.169414
TATCAAC104300.014.0668922
CTAGCGG13700.014.01392529
TACCGTC12950.013.8399457
CAACGCA105250.013.820545
CCGATAA6650.013.715939
CGTCGTA12750.013.55377810
CGCGTAA6650.013.47451610
AACGCAG108050.013.4624836
ATCAACG108700.013.4246713
CCGTCGT13050.013.2429689
GTATTAG17600.013.1824621
ATACCGT14000.013.1448586
ACGAACG6700.013.133697515
TAGCGGC14650.012.99596330
Produced by FastQC (version 0.11.5)