##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062724_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1230743 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.17027681652465 32.0 32.0 32.0 32.0 32.0 2 31.23315834418721 32.0 32.0 32.0 32.0 32.0 3 31.333299478445134 32.0 32.0 32.0 32.0 32.0 4 31.44531230321846 32.0 32.0 32.0 32.0 32.0 5 31.350732849993864 32.0 32.0 32.0 32.0 32.0 6 34.87658105713378 36.0 36.0 36.0 36.0 36.0 7 34.907143896004285 36.0 36.0 36.0 36.0 36.0 8 34.83629482353343 36.0 36.0 36.0 32.0 36.0 9 34.97639393439572 36.0 36.0 36.0 36.0 36.0 10 34.795055507120495 36.0 36.0 36.0 32.0 36.0 11 34.986943659236736 36.0 36.0 36.0 36.0 36.0 12 34.88187216990062 36.0 36.0 36.0 32.0 36.0 13 34.94239820986185 36.0 36.0 36.0 36.0 36.0 14 34.88415128097417 36.0 36.0 36.0 32.0 36.0 15 34.84943729113227 36.0 36.0 36.0 32.0 36.0 16 34.86306889415581 36.0 36.0 36.0 32.0 36.0 17 34.82763257641928 36.0 36.0 36.0 32.0 36.0 18 34.83391414779528 36.0 36.0 36.0 32.0 36.0 19 34.824779828120086 36.0 36.0 36.0 32.0 36.0 20 34.81423660341761 36.0 36.0 36.0 32.0 36.0 21 34.80353737539031 36.0 36.0 36.0 32.0 36.0 22 34.78216735744181 36.0 36.0 36.0 32.0 36.0 23 34.731327336413855 36.0 36.0 36.0 32.0 36.0 24 34.71294006953523 36.0 36.0 36.0 32.0 36.0 25 34.68466446691145 36.0 36.0 36.0 32.0 36.0 26 34.62833345385673 36.0 36.0 36.0 32.0 36.0 27 34.602109457457814 36.0 36.0 36.0 32.0 36.0 28 34.57321390412133 36.0 36.0 36.0 32.0 36.0 29 34.53518728117893 36.0 36.0 36.0 32.0 36.0 30 34.52098610351633 36.0 36.0 36.0 32.0 36.0 31 34.51194603584989 36.0 36.0 36.0 32.0 36.0 32 34.48053086631409 36.0 36.0 36.0 32.0 36.0 33 34.45562883558956 36.0 36.0 36.0 32.0 36.0 34 34.44194766900969 36.0 36.0 36.0 32.0 36.0 35 34.41312199216246 36.0 36.0 36.0 32.0 36.0 36 34.38521608491781 36.0 36.0 36.0 32.0 36.0 37 34.37331433126168 36.0 36.0 36.0 32.0 36.0 38 33.92801502832029 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 2.0 20 6.0 21 26.0 22 76.0 23 293.0 24 822.0 25 1968.0 26 4219.0 27 8412.0 28 14655.0 29 23067.0 30 35159.0 31 51241.0 32 73430.0 33 118040.0 34 285893.0 35 613432.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.40444973529925 18.726673627842537 12.343464959147108 26.5254116777111 2 15.524199609504178 20.868532260593803 37.42202880698895 26.185239322913066 3 17.539567562033668 25.15480486177862 29.115745529326592 28.189882046861126 4 11.965939052679902 16.670363644488862 36.31594128711705 35.047756015714185 5 13.987648111750381 37.321520414903844 33.45921934961239 15.231612123733388 6 33.65565947668925 36.42041664330676 16.72569614565534 13.198227734348656 7 29.602798327828495 30.807363079785656 21.354312666821045 18.235525925564804 8 27.576165074773606 33.72779238085178 19.381741507985197 19.314301036389416 9 27.584604221496527 13.938153946409404 18.45281672802736 40.02442510406671 10 15.53232634290218 26.981385031647886 31.97427543002933 25.5120131954206 11 37.35319115742328 20.980887020367568 22.52783416024611 19.13808766196304 12 24.539057802622814 24.06820286981816 28.933162162601363 22.45957716495767 13 29.730406097144808 19.601540536587745 25.077189333246665 25.590864033020782 14 23.41284898634402 20.020589188807087 25.2553945055954 31.311167319253492 15 24.99343892266704 27.639076557819138 22.22511117268187 25.142373346831953 16 25.420214326166107 25.86027442004451 24.03982641351836 24.679684840271022 17 23.878746415782988 26.082049623682607 25.317714583792068 24.72148937674234 18 24.756021362705294 24.887324161096185 26.573460096868313 23.78319437933021 19 25.625252388191523 24.932743879103924 25.45576127591219 23.98624245679236 20 25.838700687308396 24.30751180384532 25.175849060283095 24.677938448563186 21 26.86643807790435 24.385654159286283 24.46146220972748 24.286445553081887 22 25.81877569592278 24.614215837626144 24.934185936916002 24.632822529535076 23 24.121546189209436 24.40739001350405 25.706199999674993 25.764863797611522 24 24.79737849412916 25.075665675124704 25.37377827864956 24.753177552096577 25 24.804691149980133 24.694432550093723 25.40416642629696 25.09670987362918 26 24.56063090395875 25.4465192542385 25.771363941427204 24.221485900375544 27 25.22029375751071 24.986451273742773 24.885780378194312 24.907474590552212 28 24.25811075098538 24.871561325150743 25.71308551013494 25.15724241372894 29 24.635525044627514 24.818097685706928 25.61915850831571 24.927218761349852 30 24.498534625019197 25.062584146324618 25.841869504843825 24.597011723812365 31 25.122385420839283 24.76861538111531 24.92128738493739 25.187711813108017 32 24.80948500214911 25.07769696841664 24.788115796717918 25.324702232716334 33 24.24616674642878 24.75480258673013 25.56683239311538 25.43219827372571 34 24.909099625185764 24.683626069780612 25.752573851730215 24.65470045330341 35 25.546763215391028 24.566948583091676 25.52295645800951 24.363331743507782 36 24.453358662206487 25.330796112592154 25.237925383284733 24.97791984191663 37 25.412779109854778 25.082815827512324 24.894474313483805 24.609930749149093 38 24.611474532050963 24.963213278483 25.419116744925624 25.006195444540413 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 292.0 1 223.0 2 154.0 3 154.0 4 399.0 5 644.0 6 644.0 7 772.0 8 900.0 9 873.5 10 847.0 11 847.0 12 1216.5 13 1586.0 14 2086.0 15 2586.0 16 2586.0 17 3851.0 18 5116.0 19 5116.0 20 6352.5 21 7589.0 22 8549.0 23 9509.0 24 9509.0 25 11284.0 26 13059.0 27 13059.0 28 16819.0 29 20579.0 30 25205.0 31 29831.0 32 29831.0 33 37866.0 34 45901.0 35 45901.0 36 50790.0 37 55679.0 38 63166.5 39 70654.0 40 70654.0 41 74973.5 42 79293.0 43 88329.5 44 97366.0 45 97366.0 46 100355.5 47 103345.0 48 103345.0 49 109727.5 50 116110.0 51 115711.0 52 115312.0 53 115312.0 54 109448.5 55 103585.0 56 103585.0 57 100769.0 58 97953.0 59 86528.0 60 75103.0 61 75103.0 62 70359.0 63 65615.0 64 53881.0 65 42147.0 66 42147.0 67 35452.0 68 28757.0 69 28757.0 70 22957.5 71 17158.0 72 13330.5 73 9503.0 74 9503.0 75 7118.0 76 4733.0 77 4733.0 78 4495.5 79 4258.0 80 3309.0 81 2360.0 82 2360.0 83 2230.5 84 2101.0 85 2101.0 86 1343.0 87 585.0 88 489.0 89 393.0 90 393.0 91 230.5 92 68.0 93 51.5 94 35.0 95 35.0 96 25.0 97 15.0 98 15.0 99 18.5 100 22.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008775187021173388 2 0.0 3 0.0 4 6.50013853420251E-4 5 0.0 6 1.6250346335506275E-4 7 6.50013853420251E-4 8 0.0022750484869708786 9 0.003412572730456318 10 0.001056272511807908 11 0.004956355632329414 12 2.4375519503259415E-4 13 2.4375519503259415E-4 14 0.0 15 0.0 16 1.6250346335506275E-4 17 0.0 18 0.0 19 0.0 20 0.0 21 2.4375519503259415E-4 22 2.4375519503259415E-4 23 8.125173167753137E-5 24 0.0 25 0.0 26 8.125173167753137E-5 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1230743.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.28249762896228 #Duplication Level Percentage of deduplicated Percentage of total 1 80.91499860319239 47.15928214238047 2 12.123221655243585 14.13143274754237 3 3.180716509036774 5.561403071890109 4 1.2965331843316532 3.02260768966722 5 0.6951827173349878 2.0258492537385995 6 0.395378712311955 1.3826195317718206 7 0.24512103796545337 1.0000386419821217 8 0.18253368947426252 0.8510815459191554 9 0.13393236421074414 0.7025321429598609 >10 0.6783087078796898 7.189403399315906 >50 0.07012779316970374 2.897250126666696 >100 0.0725935379284117 8.711306638837895 >500 0.00896907687545794 3.491087765976891 >1k 0.0023824110450435154 1.8741053013508906 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3035 0.24659900564130774 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2138 0.17371620232656207 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1381 0.11220864144667084 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1322 0.10741478927769649 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1314 0.10676477542427623 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1275 0.10359595788885251 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1250 0.10156466459691421 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.6250346335506275E-4 2 0.0 0.0 0.0 0.0 1.6250346335506275E-4 3 0.0 0.0 0.0 0.0 1.6250346335506275E-4 4 0.0 0.0 0.0 0.0 1.6250346335506275E-4 5 0.0 0.0 0.0 0.0 1.6250346335506275E-4 6 0.0 0.0 0.0 0.0 1.6250346335506275E-4 7 0.0 0.0 0.0 0.0 1.6250346335506275E-4 8 0.0 0.0 0.0 0.0 1.6250346335506275E-4 9 0.0 0.0 0.0 0.0 1.6250346335506275E-4 10 0.0 0.0 0.0 0.0 1.6250346335506275E-4 11 0.0 0.0 0.0 0.0 1.6250346335506275E-4 12 0.0 0.0 0.0 0.0 3.250069267101255E-4 13 0.0 0.0 0.0 0.0 4.8751039006518824E-4 14 0.0 0.0 0.0 0.0 4.8751039006518824E-4 15 0.0 0.0 0.0 0.0 6.50013853420251E-4 16 0.0 0.0 0.0 1.6250346335506275E-4 6.50013853420251E-4 17 0.0 0.0 0.0 2.4375519503259412E-4 7.312655850977824E-4 18 0.0 0.0 0.0 3.250069267101255E-4 7.312655850977824E-4 19 0.0 0.0 0.0 3.250069267101255E-4 7.312655850977824E-4 20 0.0 0.0 0.0 4.062586583876569E-4 7.312655850977824E-4 21 0.0 0.0 0.0 5.687621217427196E-4 7.312655850977824E-4 22 0.0 0.0 0.0 6.50013853420251E-4 7.312655850977824E-4 23 0.0 0.0 0.0 0.0014625311701955649 7.312655850977824E-4 24 0.0 0.0 0.0 0.00235630021864841 7.312655850977824E-4 25 0.0 0.0 0.0 0.00235630021864841 7.312655850977824E-4 26 0.0 0.0 0.0 0.0027625588770360666 8.125173167753138E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAACGGA 45 0.008853989 17.776604 14 GGTATAT 65 2.099659E-4 17.231731 1 TACCGTC 285 0.0 16.845783 7 GTATAGG 95 7.6889773E-7 16.843046 1 GCATTCG 470 0.0 15.998943 22 AGGGGCG 315 0.0 15.744992 32 ATACCGT 305 0.0 15.741143 6 TCTAGCG 295 0.0 15.727775 28 GCGAGAA 265 0.0 15.697077 20 CGTATTG 495 0.0 15.514127 27 ACCGTCG 290 0.0 15.451651 8 ATTATAC 125 5.1339157E-8 15.360858 3 AGGGACG 525 0.0 15.241425 8 CTAGCGG 305 0.0 15.212111 29 GCTATAT 75 6.242151E-4 14.934168 1 GTAGGAC 400 0.0 14.800826 3 TGTAGGA 435 0.0 14.712868 2 CCGATAA 120 5.4087104E-7 14.668677 9 CGGGGGC 535 0.0 14.653239 17 ATTCGTA 525 0.0 14.627605 24 >>END_MODULE