##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062721_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2962317 Sequences flagged as poor quality 0 Sequence length 38 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.190359100663432 32.0 32.0 32.0 32.0 32.0 2 31.258791344748047 32.0 32.0 32.0 32.0 32.0 3 31.35293893259904 32.0 32.0 32.0 32.0 32.0 4 31.460990839265346 32.0 32.0 32.0 32.0 32.0 5 31.371189849026962 32.0 32.0 32.0 32.0 32.0 6 34.89625924571881 36.0 36.0 36.0 36.0 36.0 7 34.92256939416004 36.0 36.0 36.0 36.0 36.0 8 34.853173377460955 36.0 36.0 36.0 32.0 36.0 9 34.976879922034 36.0 36.0 36.0 36.0 36.0 10 34.81088485803511 36.0 36.0 36.0 32.0 36.0 11 35.00481447461565 36.0 36.0 36.0 36.0 36.0 12 34.89071358669582 36.0 36.0 36.0 32.0 36.0 13 34.954692897485316 36.0 36.0 36.0 36.0 36.0 14 34.890677128747534 36.0 36.0 36.0 32.0 36.0 15 34.859957931578556 36.0 36.0 36.0 32.0 36.0 16 34.87258757249815 36.0 36.0 36.0 32.0 36.0 17 34.836914482818685 36.0 36.0 36.0 32.0 36.0 18 34.8378043268158 36.0 36.0 36.0 32.0 36.0 19 34.832208706900715 36.0 36.0 36.0 32.0 36.0 20 34.82262769311995 36.0 36.0 36.0 32.0 36.0 21 34.81035216690179 36.0 36.0 36.0 32.0 36.0 22 34.797208738970205 36.0 36.0 36.0 32.0 36.0 23 34.73558130341891 36.0 36.0 36.0 32.0 36.0 24 34.708318184718244 36.0 36.0 36.0 32.0 36.0 25 34.69238032256507 36.0 36.0 36.0 32.0 36.0 26 34.62299544579463 36.0 36.0 36.0 32.0 36.0 27 34.61237875622359 36.0 36.0 36.0 32.0 36.0 28 34.58223309659297 36.0 36.0 36.0 32.0 36.0 29 34.54616538338065 36.0 36.0 36.0 32.0 36.0 30 34.52629445126906 36.0 36.0 36.0 32.0 36.0 31 34.52545929419438 36.0 36.0 36.0 32.0 36.0 32 34.49270486581956 36.0 36.0 36.0 32.0 36.0 33 34.455048193694324 36.0 36.0 36.0 32.0 36.0 34 34.457485137478535 36.0 36.0 36.0 32.0 36.0 35 34.418680715129405 36.0 36.0 36.0 32.0 36.0 36 34.396376214969564 36.0 36.0 36.0 32.0 36.0 37 34.3875007300029 36.0 36.0 36.0 32.0 36.0 38 33.93916822541274 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 20.0 21 67.0 22 260.0 23 742.0 24 2131.0 25 5181.0 26 10656.0 27 20237.0 28 35500.0 29 54819.0 30 82975.0 31 119806.0 32 173499.0 33 280499.0 34 684109.0 35 1491811.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.064494565921954 18.041368674646733 12.033565965170045 26.860570794261267 2 16.03427317197991 20.349003837199056 36.266847876172605 27.34987511464843 3 17.593694395299355 24.3809153443065 28.586879797131772 29.438510463262375 4 12.029143433140444 15.888896315515504 35.44533091360335 36.6366293377407 5 14.624238138077821 36.6053238767653 32.681298241409166 16.08913974374771 6 35.102433366325535 35.47633000665695 16.089944489379256 13.331292137638254 7 30.790952441715934 30.22652653240622 20.68583824336614 18.29668278251171 8 28.782252943624933 32.3005257154277 18.915627957001586 20.001593383945778 9 27.8148878960099 13.684940778913004 17.958378977822264 40.541792347254834 10 15.989256956360437 26.052319675764245 30.834364911728734 27.12405845614658 11 38.374928388671684 20.520017244109134 21.84131165959021 19.263742707628964 12 25.214722704484917 23.359784546446708 27.957110483747645 23.468382265320734 13 29.601294664000733 18.744778151397238 25.099609663124728 26.554317521477305 14 24.08868601459129 19.453495170670514 24.423255317798642 32.034563496939555 15 25.619979225720947 26.673715203335767 21.747908815970742 25.958396754972547 16 26.573320816104424 25.2269085313962 22.870948652693144 25.328821999806234 17 24.610566661164217 25.45693117920871 24.566074461308496 25.366427698318578 18 25.840549812866076 24.032640666073213 25.511786888439016 24.615022632621695 19 26.20320512625759 24.40363404726773 24.794004152830368 24.599156673644313 20 26.296206651752662 23.45461339890363 24.370180503977124 25.878999445366585 21 27.82493127831615 23.54030349953128 23.828321874374435 24.80644334777814 22 26.473164719595804 23.51027727319834 24.42321253696014 25.593345470245715 23 24.691651422385146 23.290077719673782 25.22049493081926 26.797775927121815 24 25.467834806335716 24.47877792957337 24.440227024994286 25.613160239096626 25 25.418355662739106 23.819469387424416 24.73611827518506 26.02605667465142 26 25.45440796998025 24.75961376166486 24.986193235292927 24.79978503306197 27 25.984348721978833 24.042218346873423 24.14926304233785 25.824169888809895 28 24.97599007803689 24.0046895723854 25.298035287918207 25.721285061659504 29 25.182922691933374 24.153120682222735 25.195682973834334 25.46827365200956 30 24.947465109237125 24.328321378164457 25.459631767970812 25.264581744627602 31 25.725572246319352 24.225834034642478 24.081723866824518 25.96686985221365 32 25.488325523568207 24.129659317351923 23.912869554473744 26.469145604606126 33 24.89561380500466 23.77827896204221 24.796164623840056 26.52994260911307 34 25.808142747720787 23.852376366202538 24.96157568551914 25.37790520055754 35 26.575987647507006 23.663368910214537 24.887545796077866 24.87309764620059 36 25.240175173690055 24.55955929091991 24.360222082916852 25.840043452473182 37 26.379756116580367 24.317789081992238 24.26941478579099 25.03304001563641 38 25.316745411360568 24.057899292310474 24.737266382114534 25.888088914214418 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 80.0 1 121.0 2 162.0 3 162.0 4 575.0 5 988.0 6 988.0 7 1378.5 8 1769.0 9 1900.5 10 2032.0 11 2032.0 12 2716.0 13 3400.0 14 4519.5 15 5639.0 16 5639.0 17 8704.0 18 11769.0 19 11769.0 20 13851.0 21 15933.0 22 16673.5 23 17414.0 24 17414.0 25 20132.0 26 22850.0 27 22850.0 28 29483.5 29 36117.0 30 44358.5 31 52600.0 32 52600.0 33 71671.5 34 90743.0 35 90743.0 36 101093.5 37 111444.0 38 129914.5 39 148385.0 40 148385.0 41 159462.5 42 170540.0 43 197914.5 44 225289.0 45 225289.0 46 230815.0 47 236341.0 48 236341.0 49 257143.0 50 277945.0 51 282325.5 52 286706.0 53 286706.0 54 276953.0 55 267200.0 56 267200.0 57 262122.0 58 257044.0 59 230404.5 60 203765.0 61 203765.0 62 194503.0 63 185241.0 64 153630.0 65 122019.0 66 122019.0 67 103351.0 68 84683.0 69 84683.0 70 68200.5 71 51718.0 72 40076.0 73 28434.0 74 28434.0 75 20874.5 76 13315.0 77 13315.0 78 13470.5 79 13626.0 80 10460.0 81 7294.0 82 7294.0 83 6920.5 84 6547.0 85 6547.0 86 4143.0 87 1739.0 88 1429.5 89 1120.0 90 1120.0 91 675.0 92 230.0 93 167.5 94 105.0 95 105.0 96 80.0 97 55.0 98 55.0 99 45.5 100 36.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009080729712586466 2 0.0 3 0.0 4 1.0127207857903122E-4 5 6.751471905268747E-5 6 3.375735952634374E-5 7 5.06360392895156E-4 8 0.002295500447791374 9 0.003780824266950499 10 9.452060667376247E-4 11 0.0049285744908461855 12 2.700588762107499E-4 13 1.3502943810537495E-4 14 3.375735952634374E-5 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 2.0254415715806245E-4 22 1.3502943810537495E-4 23 1.3502943810537495E-4 24 0.0 25 1.6878679763171868E-4 26 3.375735952634374E-5 27 1.0127207857903122E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 3.375735952634374E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2962317.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.809878436526105 #Duplication Level Percentage of deduplicated Percentage of total 1 67.74470366161081 26.291637138256004 2 16.335489227900705 12.679567022720159 3 6.394312210337979 7.444874387052344 4 3.1384016251237634 4.8720394222419685 5 1.7266605879868315 3.35057437604548 6 1.106422053986279 2.5764063248819413 7 0.7206373606980238 1.9577493855856518 8 0.4932346089625762 1.5313900171620056 9 0.3666672406839575 1.2807279933840763 >10 1.7468720389407655 11.691058023269122 >50 0.09689271299795328 2.613977076775611 >100 0.09695502621779853 8.118671996660265 >500 0.01921429813758342 5.3089420344592435 >1k 0.013362670977493801 9.822522348391828 >5k 1.7467543761429805E-4 0.459862453114294 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 7837 0.26455642660795586 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 5730 0.1934296700859496 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 4500 0.15190811786854683 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 4299 0.14512288860375172 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 4253 0.1435700500655399 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 4228 0.14272611607738134 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 4162 0.14049813034864264 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 3932 0.13273393765758357 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 3888 0.13124861383842445 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 3852 0.13003334889547608 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 3770 0.1272652454143159 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 3650 0.12321436227115463 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 3480 0.1174756111516762 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 3473 0.1172393096349918 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 3457 0.1166991918825703 No Hit GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCG 3339 0.11271582345846175 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 3321 0.11210819098698756 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGT 3230 0.10903627127009027 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 3179 0.10731464593424674 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 3156 0.10653822666514083 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 3065 0.10346630694824356 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 3044 0.10275740239819034 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 3009 0.10157589481476831 No Hit CTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAG 2972 0.1003268725122936 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 6.751471905268747E-5 0.0 0.0 0.0 0.0 11 6.751471905268747E-5 0.0 0.0 0.0 0.0 12 6.751471905268747E-5 0.0 0.0 0.0 0.0 13 6.751471905268747E-5 1.0127207857903121E-4 0.0 0.0 0.0 14 6.751471905268747E-5 1.0127207857903121E-4 0.0 0.0 0.0 15 6.751471905268747E-5 1.6878679763171868E-4 0.0 0.0 0.0 16 6.751471905268747E-5 1.6878679763171868E-4 0.0 1.3502943810537495E-4 0.0 17 6.751471905268747E-5 1.6878679763171868E-4 0.0 1.6878679763171868E-4 0.0 18 6.751471905268747E-5 2.0254415715806242E-4 0.0 1.6878679763171868E-4 0.0 19 6.751471905268747E-5 2.0254415715806242E-4 0.0 1.6878679763171868E-4 0.0 20 6.751471905268747E-5 2.700588762107499E-4 0.0 2.0254415715806242E-4 0.0 21 6.751471905268747E-5 2.700588762107499E-4 0.0 3.713309547897811E-4 0.0 22 6.751471905268747E-5 2.700588762107499E-4 0.0 4.726030333688123E-4 0.0 23 6.751471905268747E-5 3.0381623573709363E-4 0.0 0.0011139928643693433 0.0 24 6.751471905268747E-5 3.3757359526343737E-4 0.0 0.0018228974144225618 0.0 25 6.751471905268747E-5 3.3757359526343737E-4 0.0 0.0021267136501596554 0.0 26 6.751471905268747E-5 3.3757359526343737E-4 0.0 0.0023967725263704053 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTTT 835 0.0 15.520352 29 CTAGCGG 795 0.0 15.49625 29 CGTTTAT 835 0.0 15.137134 31 TCTAGCG 820 0.0 15.023805 28 AAGACGG 1225 0.0 15.022104 5 CAAGACG 1250 0.0 14.465389 4 TAGCGGC 880 0.0 14.363076 30 CATCGTT 895 0.0 14.301118 28 CGCAAGA 1195 0.0 14.192635 2 ACCGTCG 925 0.0 14.185386 8 TACCGTC 920 0.0 14.088784 7 GTATCAA 6025 0.0 14.075328 1 TCTAGAT 745 0.0 13.959893 2 CGGCATC 930 0.0 13.762903 25 GTATTAG 745 0.0 13.74559 1 ATACCGT 955 0.0 13.740003 6 GCGCAAG 1235 0.0 13.733417 1 ACGAAAA 725 0.0 13.682224 23 TAATATA 985 0.0 13.64598 4 GACGGAC 1255 0.0 13.643205 7 >>END_MODULE