##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062719_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 910107 Sequences flagged as poor quality 0 Sequence length 38 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14630807146852 32.0 32.0 32.0 32.0 32.0 2 31.316896804441676 32.0 32.0 32.0 32.0 32.0 3 31.397558748586704 32.0 32.0 32.0 32.0 32.0 4 31.492398146591555 32.0 32.0 32.0 32.0 32.0 5 31.40563472207114 32.0 32.0 32.0 32.0 32.0 6 34.92075217529367 36.0 36.0 36.0 36.0 36.0 7 34.9664698766189 36.0 36.0 36.0 36.0 36.0 8 34.8970791346512 36.0 36.0 36.0 36.0 36.0 9 34.999407761944475 36.0 36.0 36.0 36.0 36.0 10 34.86448406615926 36.0 36.0 36.0 32.0 36.0 11 35.02182820261793 36.0 36.0 36.0 36.0 36.0 12 34.92227177683503 36.0 36.0 36.0 32.0 36.0 13 34.98320307392427 36.0 36.0 36.0 36.0 36.0 14 34.91781845431361 36.0 36.0 36.0 32.0 36.0 15 34.897106603948764 36.0 36.0 36.0 32.0 36.0 16 34.9093776885575 36.0 36.0 36.0 32.0 36.0 17 34.879387808246726 36.0 36.0 36.0 32.0 36.0 18 34.875749774477065 36.0 36.0 36.0 32.0 36.0 19 34.85358424888502 36.0 36.0 36.0 32.0 36.0 20 34.83064299032971 36.0 36.0 36.0 32.0 36.0 21 34.81208912798166 36.0 36.0 36.0 32.0 36.0 22 34.80098823544924 36.0 36.0 36.0 32.0 36.0 23 34.74270497864537 36.0 36.0 36.0 32.0 36.0 24 34.725693792048624 36.0 36.0 36.0 32.0 36.0 25 34.701633983696425 36.0 36.0 36.0 32.0 36.0 26 34.63999727504568 36.0 36.0 36.0 32.0 36.0 27 34.619355746082604 36.0 36.0 36.0 32.0 36.0 28 34.56728714316009 36.0 36.0 36.0 32.0 36.0 29 34.527463254320644 36.0 36.0 36.0 32.0 36.0 30 34.49306619990836 36.0 36.0 36.0 32.0 36.0 31 34.473771765297926 36.0 36.0 36.0 32.0 36.0 32 34.438759398620164 36.0 36.0 36.0 32.0 36.0 33 34.423730396535795 36.0 36.0 36.0 32.0 36.0 34 34.37792808977406 36.0 36.0 36.0 32.0 36.0 35 34.34861505295531 36.0 36.0 36.0 32.0 36.0 36 34.305335526482054 36.0 36.0 36.0 32.0 36.0 37 34.26634450674481 36.0 36.0 36.0 32.0 36.0 38 33.86007139819824 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 5.0 21 13.0 22 80.0 23 202.0 24 586.0 25 1472.0 26 3224.0 27 6220.0 28 10921.0 29 17454.0 30 26418.0 31 37727.0 32 53474.0 33 84469.0 34 203559.0 35 464280.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.741664523870746 19.355490942017042 12.951717863006113 25.9511266711061 2 14.42709483610169 21.228712667851145 39.536010600951315 24.808181895095853 3 17.504315426647636 26.22548777231688 29.659809231222262 26.61038756981322 4 11.455930909070931 17.39381719691684 37.138901555315044 34.011350338697184 5 12.948587363903366 38.55766409883673 33.746251814347104 14.7474967229128 6 32.18581132307665 37.139300257332664 17.62344166503682 13.051446754553867 7 28.493540826787356 31.598361061025095 21.829445303323478 18.07865280886407 8 26.84555720252151 35.13077263702201 19.649463625066065 18.374206535390417 9 27.50928224281402 14.293390295921968 19.362665110744107 38.834662350519906 10 16.160219932117275 27.428884110409967 32.00223272413221 24.40866323334055 11 36.185617306876644 20.94221737764074 24.20461812659741 18.6675471888852 12 25.41816603578708 24.072277374588648 29.87226748561979 20.637289104004484 13 29.8969899077579 20.48840518401723 25.603749017970458 24.01085589025442 14 22.763037752703802 21.572628273378843 25.893658657718266 29.770675316199085 15 23.988717810103648 30.185461709447353 22.90818552104313 22.917634959405873 16 23.600741451279905 26.137256388534535 26.86046805485509 23.40153410533047 17 22.438570409852908 27.267563044784843 26.942216684411836 23.351649860950417 18 23.408566245507394 24.66292424956626 29.769686421486703 22.15882308343964 19 25.144186342924513 24.997720048302014 26.702904164015877 23.155189444757596 20 25.56314806940283 24.743574107220358 26.88475091390353 22.80852690947328 21 25.961509935666765 24.45256316578856 25.415309222562232 24.17061767598244 22 25.1530041555599 26.24474511760169 25.87940305854483 22.722847668293582 23 22.414067796423936 25.936400884731135 27.351728972527408 24.29780234631752 24 24.23989706704816 25.67884875075129 27.154719170383263 22.926535011817293 25 23.888509812582477 25.571608613053193 27.234270256134717 23.305611318229616 26 22.25630860581075 26.977956413868277 27.92092349682345 22.844811483497526 27 23.75544853517224 26.176812177029735 26.755315583772017 23.31242370402601 28 22.5408660739891 26.351846541120988 26.95353403500907 24.153753349880837 29 23.281438336371437 25.516779895111235 26.976498367774337 24.22528340074299 30 22.527900565537898 25.80762481774121 27.84463804805369 23.819836568667203 31 24.153973104261368 25.260985796175618 26.50512522153988 24.079915878023133 32 22.91510778402979 26.574128097025955 26.406895013443478 24.103869105500785 33 22.182996065297818 26.320971050656684 27.837056521925447 23.658976362120058 34 23.39604024581725 26.20768766749404 27.775854926948153 22.62041715974056 35 23.883015953069254 26.27273496413059 27.317996675116223 22.52625240768393 36 22.462963146091614 26.600608499879684 27.348982042770796 23.587446311257906 37 23.686885168447226 26.70620047972381 25.927830463890512 23.67908388793845 38 23.18057107570868 27.106483083857174 26.419970399084942 23.292975441349203 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 489.0 1 343.5 2 198.0 3 198.0 4 641.5 5 1085.0 6 1085.0 7 1290.5 8 1496.0 9 1466.0 10 1436.0 11 1436.0 12 1799.5 13 2163.0 14 2702.0 15 3241.0 16 3241.0 17 4845.0 18 6449.0 19 6449.0 20 7233.5 21 8018.0 22 8299.5 23 8581.0 24 8581.0 25 10264.0 26 11947.0 27 11947.0 28 16492.0 29 21037.0 30 27617.5 31 34198.0 32 34198.0 33 42900.0 34 51602.0 35 51602.0 36 54398.5 37 57195.0 38 62003.0 39 66811.0 40 66811.0 41 65292.5 42 63774.0 43 67140.5 44 70507.0 45 70507.0 46 71621.0 47 72735.0 48 72735.0 49 74995.5 50 77256.0 51 74609.0 52 71962.0 53 71962.0 54 67173.5 55 62385.0 56 62385.0 57 60430.0 58 58475.0 59 51555.5 60 44636.0 61 44636.0 62 42810.5 63 40985.0 64 33653.5 65 26322.0 66 26322.0 67 22092.5 68 17863.0 69 17863.0 70 14431.5 71 11000.0 72 8593.0 73 6186.0 74 6186.0 75 4652.0 76 3118.0 77 3118.0 78 3070.0 79 3022.0 80 2344.0 81 1666.0 82 1666.0 83 1583.5 84 1501.0 85 1501.0 86 934.0 87 367.0 88 330.5 89 294.0 90 294.0 91 179.0 92 64.0 93 41.5 94 19.0 95 19.0 96 17.0 97 15.0 98 15.0 99 12.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008900052411419756 2 0.0 3 0.0 4 2.1975438052888286E-4 5 0.0 6 1.0987719026444143E-4 7 6.592631415866486E-4 8 0.0017580350442310628 9 0.003955578849519892 10 8.790175221155314E-4 11 0.0045049648008420986 12 2.1975438052888286E-4 13 2.1975438052888286E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 2.1975438052888286E-4 22 1.0987719026444143E-4 23 0.0 24 0.0 25 0.0 26 1.0987719026444143E-4 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 910107.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.13506097853664 #Duplication Level Percentage of deduplicated Percentage of total 1 77.69443179971441 41.28298371370581 2 14.124348075705262 15.009961925693515 3 4.105408739766977 6.544234311880068 4 1.513490148351877 3.2167756529236584 5 0.7625735616275161 2.025969634884897 6 0.3952655312327831 1.2601474862860567 7 0.25157540791065985 0.9357232248023201 8 0.1524040371957922 0.6478398247818868 9 0.11440127366887194 0.5470846787175991 >10 0.6645654958264425 7.042670025429901 >50 0.09964081955902368 3.7371291955106662 >100 0.10983040579687599 11.886666348447381 >500 0.009568558062086355 3.4820543610851455 >1k 0.002496145581413832 2.3807596158511313 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4482 0.49246956676522646 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3442 0.37819728889020743 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1997 0.21942474895808953 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCA 1555 0.17085903086120643 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCA 1460 0.1604206977860845 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1422 0.15624536455603572 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1316 0.14459838238800493 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1312 0.14415887362694715 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAG 1295 0.14229096139245168 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTC 1140 0.12525999690146322 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1106 0.12152417243247224 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1013 0.11130559373787917 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 994 0.10921792712285479 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 985 0.10822903241047481 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 966 0.10614136579545043 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 954 0.10482283951227714 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 933 0.10251541851672387 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 3.296315707933243E-4 0.0 17 0.0 0.0 0.0 4.395087610577657E-4 0.0 18 0.0 0.0 0.0 6.592631415866486E-4 0.0 19 0.0 0.0 0.0 6.592631415866486E-4 0.0 20 0.0 0.0 0.0 8.790175221155314E-4 0.0 21 0.0 0.0 0.0 0.0012086490929088557 0.0 22 0.0 0.0 0.0 0.0017580350442310628 0.0 23 0.0 0.0 0.0 0.0034061928981976844 0.0 24 0.0 0.0 0.0 0.00538398232295763 0.0 25 0.0 0.0 0.0 0.006482754225602044 0.0 26 0.0 0.0 0.0 0.0076914033185109 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGTCG 225 0.0 22.756454 8 ATACCGT 260 0.0 20.923904 6 TACCGTC 245 0.0 20.898785 7 GTCGTAG 255 0.0 20.079224 11 CCGTCGT 265 0.0 19.925316 9 CGTCGTA 275 0.0 19.7826 10 TAGTGCA 65 9.431533E-6 19.692005 4 GTTTTCG 210 0.0 18.285433 28 GGCAACG 45 0.008849683 17.777504 20 CGGTCAA 45 0.008849683 17.777504 30 CCCCTAT 55 0.0013634868 17.456194 1 CCAACGA 175 0.0 17.37116 29 TAACCCG 65 2.1000457E-4 17.230503 28 TTTTCGG 225 0.0 17.066402 29 CTAGCGG 170 0.0 16.940914 29 CAGATAC 315 0.0 16.761644 3 TAGGACG 1425 0.0 16.617287 4 AATCCCG 145 6.91216E-11 16.551468 19 TTAGGAC 835 0.0 16.478788 3 TAGCGGC 175 0.0 16.456888 30 >>END_MODULE