##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062717_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3406755 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.259950011080925 32.0 32.0 32.0 32.0 32.0 2 30.882276242347924 32.0 32.0 32.0 32.0 32.0 3 30.930232728799105 32.0 32.0 32.0 32.0 32.0 4 31.00244161966446 32.0 32.0 32.0 32.0 32.0 5 30.904557269307595 32.0 32.0 32.0 32.0 32.0 6 34.55794619806825 36.0 36.0 36.0 32.0 36.0 7 34.50794260227108 36.0 36.0 36.0 32.0 36.0 8 34.48550013135667 36.0 36.0 36.0 32.0 36.0 9 34.63502394507383 36.0 36.0 36.0 32.0 36.0 10 34.34637771134114 36.0 36.0 36.0 32.0 36.0 11 34.60900710500168 36.0 36.0 36.0 32.0 36.0 12 34.43091563672762 36.0 36.0 36.0 32.0 36.0 13 34.51798412272089 36.0 36.0 36.0 32.0 36.0 14 34.41615437564486 36.0 36.0 36.0 32.0 36.0 15 34.36002911861875 36.0 36.0 36.0 32.0 36.0 16 34.37982713755465 36.0 36.0 36.0 32.0 36.0 17 34.30247816470512 36.0 36.0 36.0 32.0 36.0 18 34.32920535817809 36.0 36.0 36.0 32.0 36.0 19 34.32259408146462 36.0 36.0 36.0 32.0 36.0 20 34.30053731483479 36.0 36.0 36.0 32.0 36.0 21 34.289187511282734 36.0 36.0 36.0 32.0 36.0 22 34.26442435690268 36.0 36.0 36.0 32.0 36.0 23 34.21241474658436 36.0 36.0 36.0 32.0 36.0 24 34.191635148403684 36.0 36.0 36.0 32.0 36.0 25 34.1667448936011 36.0 36.0 36.0 32.0 36.0 26 34.12069109754003 36.0 36.0 36.0 32.0 36.0 27 34.11321712303938 36.0 36.0 36.0 32.0 36.0 28 34.094604689800114 36.0 36.0 36.0 32.0 36.0 29 34.07232806585739 36.0 36.0 36.0 32.0 36.0 30 34.04124159207222 36.0 36.0 36.0 32.0 36.0 31 34.057573849601745 36.0 36.0 36.0 32.0 36.0 32 34.01489746107366 36.0 36.0 36.0 32.0 36.0 33 33.98478728291292 36.0 36.0 36.0 32.0 36.0 34 33.995160203771626 36.0 36.0 36.0 32.0 36.0 35 33.9495895654369 36.0 36.0 36.0 32.0 36.0 36 33.91634355860636 36.0 36.0 36.0 32.0 36.0 37 33.908495327665186 36.0 36.0 36.0 32.0 36.0 38 33.30753165402267 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 3.0 7 6.0 8 5.0 9 16.0 10 32.0 11 35.0 12 16.0 13 13.0 14 244.0 15 643.0 16 922.0 17 1152.0 18 1407.0 19 1875.0 20 2640.0 21 3936.0 22 5966.0 23 9214.0 24 14210.0 25 21888.0 26 31557.0 27 45901.0 28 65146.0 29 88155.0 30 118954.0 31 160328.0 32 219062.0 33 329479.0 34 732685.0 35 1551265.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.63769632276874 16.942654942161194 11.228516176055676 26.19113255901439 2 16.79515848695081 19.174122129199038 37.64058473617031 26.390134647679837 3 18.96696028452701 23.39715032637526 28.250725482223665 29.385163906874062 4 12.410832986709304 15.10522448761532 36.007754202125305 36.476188323550076 5 14.784321921459318 36.36991802143043 33.716798209668816 15.128961847441428 6 34.96080867712884 35.30210179851817 16.635067626056397 13.102021898296586 7 30.78065829838559 30.032203684857695 20.82657592141256 18.36056209534416 8 28.40663754986807 33.135323839014376 19.14854645454201 19.30949215657554 9 27.396729900027765 14.203964721760883 18.274623350258576 40.12468202795277 10 15.549684184695153 26.672670454845658 31.811163640996163 25.96648171946302 11 38.12940770692831 20.88141663058554 21.92116946876353 19.068006193722617 12 24.719894348160853 23.43999006651968 28.834274968950535 23.005840616368932 13 29.53402223113404 19.251931910326245 25.173022012122548 26.041023846417165 14 23.53294316718001 19.658485233142674 24.898485561934375 31.91008603774294 15 25.33094728126592 27.133698679205676 22.038870725989128 25.49648331353928 16 26.10371816915992 25.543672113687265 23.557162891290236 24.79544682586258 17 24.331982486257385 25.779217976688862 25.084182053434358 24.804617483619403 18 25.220517005524666 24.69479295707668 25.94227574019386 24.14241429720479 19 25.76315160638621 25.041846887654245 25.02614146156163 24.16886004439792 20 25.744868037773188 24.37427033799368 24.75797311233118 25.122888511901948 21 26.98218859394838 24.21452946918047 24.142579314697528 24.660702622173623 22 25.71220145135154 24.301272868180643 24.817201333928278 25.169324346539533 23 24.45493122514792 23.99984734639598 25.35949189835031 26.18572953010578 24 24.869370789670384 25.087061675071915 24.89232888439513 25.151238650862574 25 25.052192863603924 24.50564675259247 24.956101038220353 25.486059345583257 26 24.81109499286129 25.258325046673928 25.43771030425912 24.492869656205656 27 25.51038740829114 24.774573512695984 24.45755558895642 25.257483490056458 28 24.572786124608808 24.66739800308171 25.401924352181638 25.357891520127847 29 24.567626114493173 24.96197564033726 25.429423529864202 25.04097471530536 30 24.633576651763452 25.09091784385057 25.592173183778655 24.683332320607327 31 25.242305193728203 24.873750605818028 24.496330746259193 25.38761345419458 32 24.87371991610194 24.845509266801997 24.456489990503492 25.82428082659257 33 24.526786445568003 24.458181158469404 25.143353345410446 25.871679050552142 34 25.36083097691809 24.654346764117356 25.244546581867034 24.74027567709752 35 25.903125267896044 24.455517807086665 25.20923781887703 24.432119106140266 36 24.57771172836389 25.234307751385415 24.829164665416396 25.358815854834297 37 25.679901808677812 24.905949399529298 24.72757984870293 24.686568943089956 38 24.7705662550759 24.750105605718883 25.16565933928835 25.313668799916865 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 82.0 1 153.0 2 224.0 3 224.0 4 564.0 5 904.0 6 904.0 7 1069.0 8 1234.0 9 1328.0 10 1422.0 11 1422.0 12 1906.5 13 2391.0 14 3542.0 15 4693.0 16 4693.0 17 7144.5 18 9596.0 19 9596.0 20 12209.0 21 14822.0 22 17764.0 23 20706.0 24 20706.0 25 26701.0 26 32696.0 27 32696.0 28 42021.0 29 51346.0 30 63421.5 31 75497.0 32 75497.0 33 96093.0 34 116689.0 35 116689.0 36 131630.5 37 146572.0 38 166850.0 39 187128.0 40 187128.0 41 200951.0 42 214774.0 43 242569.5 44 270365.0 45 270365.0 46 279670.5 47 288976.0 48 288976.0 49 305754.0 50 322532.0 51 324262.0 52 325992.0 53 325992.0 54 310189.0 55 294386.0 56 294386.0 57 285834.5 58 277283.0 59 248951.5 60 220620.0 61 220620.0 62 206062.0 63 191504.0 64 159003.0 65 126502.0 66 126502.0 67 104405.0 68 82308.0 69 82308.0 70 65571.5 71 48835.0 72 38465.0 73 28095.0 74 28095.0 75 20971.0 76 13847.0 77 13847.0 78 13365.0 79 12883.0 80 10027.0 81 7171.0 82 7171.0 83 7161.0 84 7151.0 85 7151.0 86 4748.0 87 2345.0 88 2064.5 89 1784.0 90 1784.0 91 1288.0 92 792.0 93 684.0 94 576.0 95 576.0 96 552.0 97 528.0 98 528.0 99 1016.0 100 1504.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12313770729036869 2 0.054861591162264384 3 0.01174137852589928 4 0.002524396383068345 5 3.228879094622302E-4 6 1.761206778884892E-4 7 5.87068926294964E-5 8 4.696551410359712E-4 9 2.6418101683273377E-4 10 4.990085873507194E-4 11 0.002348275705179856 12 0.002759223953586331 13 0.015880214456278775 14 0.010068232085958632 15 0.02495042936753597 16 0.01256327502271223 17 0.02183896405817266 18 0.006310990957670863 19 0.008483145984962229 20 0.0062229306187266175 21 0.0067512926523920855 22 0.008072197736555755 23 0.01027370621016187 24 0.01611504202679676 25 0.01872749874880935 26 0.019901636601399278 27 0.009481163159663668 28 0.006046809940838129 29 0.011330430277492805 30 0.003170172201992806 31 0.005988103048208633 32 0.0070448271155395675 33 0.009158275250201438 34 0.013238404287951437 35 0.0171130592014982 36 0.01617374891942626 37 0.01009758553227338 38 0.006340344403985612 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 3406755.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.12300444721786 #Duplication Level Percentage of deduplicated Percentage of total 1 75.78195540764548 37.984192879162805 2 13.881572220555539 13.915722122905624 3 4.622811311453889 6.951275757679569 4 2.015235771591312 4.040386861666554 5 1.0256373827264238 2.5704013547814712 6 0.6283369647154478 1.8896481886070255 7 0.39991819824209346 1.4031571140308263 8 0.2864106621825644 1.1484610315445831 9 0.2078507212209578 0.9376292361703958 >10 0.9974885700902957 8.802711748328235 >50 0.07025570965788104 2.4507755981569863 >100 0.06294759216953705 6.713086066315645 >500 0.011676923418028033 4.045395676622023 >1k 0.00790256433058297 7.14715636402833 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4571 0.13417460310471402 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 4194 0.12310835384405396 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 4128 0.12117102638728057 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 3898 0.11441973373488848 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 3796 0.11142568221078415 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 3765 0.11051572537502698 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 3740 0.10978188921715827 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 3615 0.10611270842781474 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 3608 0.1059072343036115 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 3554 0.1043221482026151 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 3410 0.10009525193329136 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.93534463147482E-5 2 0.0 0.0 0.0 0.0 5.87068926294964E-5 3 0.0 0.0 0.0 0.0 5.87068926294964E-5 4 0.0 0.0 0.0 0.0 5.87068926294964E-5 5 0.0 0.0 0.0 0.0 5.87068926294964E-5 6 0.0 0.0 0.0 0.0 8.80603389442446E-5 7 0.0 0.0 0.0 0.0 8.80603389442446E-5 8 0.0 0.0 0.0 2.93534463147482E-5 8.80603389442446E-5 9 0.0 0.0 0.0 5.87068926294964E-5 8.80603389442446E-5 10 0.0 0.0 0.0 8.80603389442446E-5 8.80603389442446E-5 11 0.0 2.93534463147482E-5 0.0 8.80603389442446E-5 8.80603389442446E-5 12 0.0 2.93534463147482E-5 0.0 8.80603389442446E-5 3.815948020917266E-4 13 0.0 2.93534463147482E-5 0.0 8.80603389442446E-5 4.990085873507194E-4 14 0.0 2.93534463147482E-5 0.0 8.80603389442446E-5 4.990085873507194E-4 15 2.93534463147482E-5 2.93534463147482E-5 0.0 1.46767231573741E-4 6.751292652392085E-4 16 2.93534463147482E-5 2.93534463147482E-5 0.0 2.0547412420323738E-4 7.044827115539568E-4 17 2.93534463147482E-5 2.93534463147482E-5 0.0 2.348275705179856E-4 7.33836157868705E-4 18 2.93534463147482E-5 2.93534463147482E-5 0.0 2.6418101683273377E-4 8.512499431276978E-4 19 2.93534463147482E-5 2.93534463147482E-5 0.0 3.815948020917266E-4 8.512499431276978E-4 20 2.93534463147482E-5 2.93534463147482E-5 0.0 5.283620336654675E-4 9.099568357571942E-4 21 2.93534463147482E-5 5.87068926294964E-5 0.0 6.164223726097122E-4 9.393102820719424E-4 22 2.93534463147482E-5 5.87068926294964E-5 0.0 8.512499431276978E-4 9.686637283866905E-4 23 2.93534463147482E-5 5.87068926294964E-5 0.0 0.0012915516378489208 0.001027370621016187 24 2.93534463147482E-5 5.87068926294964E-5 0.0 0.0017318533325701437 0.001027370621016187 25 5.87068926294964E-5 5.87068926294964E-5 0.0 0.0019960343494028776 0.001027370621016187 26 5.87068926294964E-5 5.87068926294964E-5 0.0 0.0022895688125503595 0.0011154309599604316 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTTT 750 0.0 19.19882 29 TCTAGCG 945 0.0 17.606867 28 CATCGTT 840 0.0 17.331758 28 TAACGCT 65 2.106221E-4 17.22617 4 CGTTTAT 850 0.0 16.751911 31 CTAGCGG 1005 0.0 16.71539 29 TAGCGGC 1010 0.0 16.315828 30 CGGCATC 905 0.0 15.557511 25 GCATCGT 920 0.0 15.476627 27 TCGTTTA 925 0.0 15.393647 30 AAGACGG 1030 0.0 15.06416 5 TTTTCGG 975 0.0 14.768322 29 GTATTAG 880 0.0 14.741515 1 CAAGACG 1010 0.0 14.570367 4 CGGTCCA 1185 0.0 14.448066 10 GTATCAA 5110 0.0 14.417061 1 GTTTTCG 1020 0.0 14.1163645 28 GGCATCG 1010 0.0 13.939737 26 CGCCGGT 1195 0.0 13.923421 7 AACCGCG 660 0.0 13.816926 7 >>END_MODULE