##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062717_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3406755 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.19120746869088 32.0 32.0 32.0 32.0 32.0 2 31.227078847759817 32.0 32.0 32.0 32.0 32.0 3 31.341413750034857 32.0 32.0 32.0 32.0 32.0 4 31.450077272947425 32.0 32.0 32.0 32.0 32.0 5 31.358210379085083 32.0 32.0 32.0 32.0 32.0 6 34.88091541657677 36.0 36.0 36.0 36.0 36.0 7 34.92032506006449 36.0 36.0 36.0 36.0 36.0 8 34.84262912947952 36.0 36.0 36.0 32.0 36.0 9 34.97646587441715 36.0 36.0 36.0 36.0 36.0 10 34.80330519805504 36.0 36.0 36.0 32.0 36.0 11 35.00781799689147 36.0 36.0 36.0 36.0 36.0 12 34.891501736990186 36.0 36.0 36.0 32.0 36.0 13 34.954854986636846 36.0 36.0 36.0 36.0 36.0 14 34.89423659758333 36.0 36.0 36.0 32.0 36.0 15 34.86112561660583 36.0 36.0 36.0 32.0 36.0 16 34.88051386143118 36.0 36.0 36.0 32.0 36.0 17 34.84180723298271 36.0 36.0 36.0 32.0 36.0 18 34.84608902019664 36.0 36.0 36.0 32.0 36.0 19 34.841896467459506 36.0 36.0 36.0 32.0 36.0 20 34.83531836014037 36.0 36.0 36.0 32.0 36.0 21 34.8272916602456 36.0 36.0 36.0 32.0 36.0 22 34.80368561871928 36.0 36.0 36.0 32.0 36.0 23 34.74306047837312 36.0 36.0 36.0 32.0 36.0 24 34.717355958969755 36.0 36.0 36.0 32.0 36.0 25 34.700078814003355 36.0 36.0 36.0 32.0 36.0 26 34.63422641193746 36.0 36.0 36.0 32.0 36.0 27 34.61687265447618 36.0 36.0 36.0 32.0 36.0 28 34.58660837072229 36.0 36.0 36.0 32.0 36.0 29 34.553916263423694 36.0 36.0 36.0 32.0 36.0 30 34.53022304216182 36.0 36.0 36.0 32.0 36.0 31 34.53245008813372 36.0 36.0 36.0 32.0 36.0 32 34.50698802819692 36.0 36.0 36.0 32.0 36.0 33 34.47370444895509 36.0 36.0 36.0 32.0 36.0 34 34.46624515117759 36.0 36.0 36.0 32.0 36.0 35 34.44518640172246 36.0 36.0 36.0 32.0 36.0 36 34.4088882235441 36.0 36.0 36.0 32.0 36.0 37 34.40748923829275 36.0 36.0 36.0 32.0 36.0 38 33.95750031921873 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 12.0 21 69.0 22 243.0 23 793.0 24 2209.0 25 5448.0 26 11648.0 27 22731.0 28 38842.0 29 62646.0 30 95065.0 31 138878.0 32 201545.0 33 326421.0 34 794398.0 35 1705806.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.96111396028876 18.168111527544436 12.002174703745053 26.86859980842175 2 15.80339648727308 20.157657360156513 36.869895252226826 27.169050900343585 3 17.892569321832653 24.148052912522328 28.59621546016664 29.36316230547838 4 11.91111413778113 15.979594634301128 36.01187759246273 36.09741363545501 5 14.284519179711108 36.89368550856813 33.31822607522534 15.503569236495418 6 35.122955824198534 35.68903753487193 16.224515315467634 12.963491325461906 7 30.59179743684578 30.23876198359722 20.703458438272364 18.465982141284627 8 28.254091914742226 33.43468391446512 18.874603460225085 19.436620710567574 9 27.279801704556462 13.987149778931343 18.0281474323335 40.704901084178694 10 15.285147173302743 26.94688047078549 31.78852930022086 25.979443055690908 11 38.27859682680027 20.784578609772286 21.78102872870343 19.155795834724017 12 24.49442239180074 23.4898570395747 28.823889769331274 23.191830799293285 13 29.595781784921638 19.166542648137565 25.128795810903593 26.108879756037208 14 23.42111481453759 19.5937776564502 24.851302779331064 32.13380474968115 15 25.329558480137255 27.194969993439503 21.87160509047466 25.60386643594858 16 26.115445964105422 25.602171451181977 23.415984834831043 24.866397749881557 17 24.2905051874878 25.855131936402824 24.91632066291823 24.938042213191146 18 25.295713956536353 24.652433180548645 25.81083758591387 24.241015277001136 19 25.70774828245647 25.076942721152534 24.948991048666546 24.266317947724446 20 25.75897004627571 24.32578802995813 24.71886002955892 25.196381894207242 21 27.01334352487682 24.24639230514984 24.041563415646486 24.698700754326854 22 25.66927344915424 24.371087551375883 24.756439707710037 25.203199291759837 23 24.436082611310667 23.972708291688058 25.26018206800677 26.3310270289945 24 24.9323769980524 25.065935178784503 24.78073709439041 25.22095072877269 25 25.11455185786822 24.47705352367679 24.92304991789839 25.4853447005566 26 24.940111595997713 25.18048710898618 25.25912503782928 24.62027625718683 27 25.59749743964264 24.699867997396932 24.40692025921472 25.295714303745708 28 24.59924473582632 24.61544783819206 25.330908738667734 25.45439868731388 29 24.659595421449442 24.777743042866305 25.356504943854198 25.20615659183005 30 24.634615638635594 24.94902040211286 25.56696915393094 24.849394805320603 31 25.262251027737538 24.77950424964519 24.48461952796723 25.47362519465004 32 24.96155432368926 24.739055200623465 24.46650845159103 25.832882024096243 33 24.549960299463862 24.35282255401401 25.16864288743981 25.92857425908232 34 25.3043732231992 24.532025343765547 25.294686585915336 24.868914847119914 35 25.89942628689178 24.43486543646373 25.143340216716492 24.522368059927995 36 24.747508993162114 25.16359409467367 24.740845760848668 25.34805115131555 37 25.73341074817847 24.902796033995998 24.643340845860898 24.720452371964633 38 24.858288899553973 24.548521980594437 25.18745844652756 25.40573067332403 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 29.0 1 56.0 2 83.0 3 83.0 4 371.5 5 660.0 6 660.0 7 828.0 8 996.0 9 1184.0 10 1372.0 11 1372.0 12 1862.5 13 2353.0 14 3422.0 15 4491.0 16 4491.0 17 7055.5 18 9620.0 19 9620.0 20 12105.5 21 14591.0 22 17812.0 23 21033.0 24 21033.0 25 26614.0 26 32195.0 27 32195.0 28 41654.5 29 51114.0 30 63123.0 31 75132.0 32 75132.0 33 96683.5 34 118235.0 35 118235.0 36 132233.0 37 146231.0 38 166364.5 39 186498.0 40 186498.0 41 199938.5 42 213379.0 43 241105.5 44 268832.0 45 268832.0 46 279140.5 47 289449.0 48 289449.0 49 306567.0 50 323685.0 51 323738.5 52 323792.0 53 323792.0 54 309468.0 55 295144.0 56 295144.0 57 287544.5 58 279945.0 59 252042.0 60 224139.0 61 224139.0 62 208730.5 63 193322.0 64 160253.0 65 127184.0 66 127184.0 67 105378.0 68 83572.0 69 83572.0 70 66359.5 71 49147.0 72 38650.5 73 28154.0 74 28154.0 75 20858.5 76 13563.0 77 13563.0 78 13083.5 79 12604.0 80 9831.0 81 7058.0 82 7058.0 83 6539.0 84 6020.0 85 6020.0 86 3842.0 87 1664.0 88 1386.0 89 1108.0 90 1108.0 91 651.5 92 195.0 93 149.5 94 104.0 95 104.0 96 64.0 97 24.0 98 24.0 99 31.0 100 38.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009216982142830935 2 0.0 3 0.0 4 1.174137852589928E-4 5 1.174137852589928E-4 6 8.80603389442446E-5 7 4.4030169472122297E-4 8 0.0028766377388453235 9 0.003551767004084532 10 6.751292652392085E-4 11 0.004755258302989208 12 2.348275705179856E-4 13 1.761206778884892E-4 14 0.0 15 0.0 16 2.93534463147482E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 2.6418101683273377E-4 22 2.93534463147482E-5 23 1.761206778884892E-4 24 0.0 25 2.93534463147482E-5 26 5.87068926294964E-5 27 1.174137852589928E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 2.93534463147482E-5 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 3406755.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.89636669911832 #Duplication Level Percentage of deduplicated Percentage of total 1 73.50908294657155 35.208179925248956 2 15.124100374656162 14.487789150776084 3 5.098525566920352 7.326025505341419 4 2.1948872911993424 4.205085062500728 5 1.151591839303675 2.7578532511500478 6 0.6874444235417354 1.9755654117131378 7 0.4551487632242964 1.5259980446228756 8 0.3190385360938716 1.2224629372721574 9 0.22334492686997975 0.962766946597708 >10 1.0726658358359966 9.075967073361767 >50 0.074836349048773 2.504603403158465 >100 0.06786913989229876 6.848727811247432 >500 0.013014096103579183 4.353280829447171 >1k 0.008449910738388886 7.545694647562226 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 4702 0.13801990457194602 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4641 0.13622934434674638 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 4121 0.12096555226307733 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 3968 0.11647447497692086 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 3902 0.11453714752014749 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 3866 0.11348042345281655 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 3844 0.11283464763389207 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 3781 0.11098538051606294 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 3743 0.1098699495561025 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 3621 0.10628882910570323 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.46767231573741E-4 2 0.0 0.0 0.0 0.0 1.46767231573741E-4 3 0.0 0.0 0.0 0.0 1.46767231573741E-4 4 0.0 0.0 0.0 0.0 1.46767231573741E-4 5 0.0 0.0 0.0 0.0 1.761206778884892E-4 6 0.0 0.0 0.0 0.0 2.348275705179856E-4 7 0.0 0.0 0.0 0.0 2.6418101683273377E-4 8 0.0 0.0 0.0 0.0 2.6418101683273377E-4 9 0.0 0.0 0.0 2.93534463147482E-5 2.6418101683273377E-4 10 0.0 0.0 2.93534463147482E-5 2.93534463147482E-5 2.93534463147482E-4 11 0.0 0.0 2.93534463147482E-5 2.93534463147482E-5 2.93534463147482E-4 12 0.0 0.0 2.93534463147482E-5 2.93534463147482E-5 5.283620336654675E-4 13 0.0 0.0 2.93534463147482E-5 2.93534463147482E-5 5.577154799802158E-4 14 0.0 0.0 2.93534463147482E-5 2.93534463147482E-5 7.044827115539568E-4 15 0.0 0.0 2.93534463147482E-5 8.80603389442446E-5 7.631896041834532E-4 16 0.0 0.0 2.93534463147482E-5 1.761206778884892E-4 8.218964968129495E-4 17 5.87068926294964E-5 0.0 2.93534463147482E-5 2.0547412420323738E-4 8.512499431276978E-4 18 5.87068926294964E-5 0.0 2.93534463147482E-5 2.0547412420323738E-4 8.512499431276978E-4 19 5.87068926294964E-5 0.0 2.93534463147482E-5 3.522413557769784E-4 8.512499431276978E-4 20 5.87068926294964E-5 0.0 2.93534463147482E-5 4.990085873507194E-4 9.686637283866905E-4 21 5.87068926294964E-5 0.0 2.93534463147482E-5 5.87068926294964E-4 0.001027370621016187 22 5.87068926294964E-5 0.0 2.93534463147482E-5 7.631896041834532E-4 0.001027370621016187 23 5.87068926294964E-5 0.0 2.93534463147482E-5 0.0010860775136456835 0.001056724067330935 24 5.87068926294964E-5 0.0 2.93534463147482E-5 0.0014089654231079136 0.001056724067330935 25 8.80603389442446E-5 0.0 2.93534463147482E-5 0.0017024998862553956 0.001056724067330935 26 8.80603389442446E-5 0.0 2.93534463147482E-5 0.001937327456773381 0.0011154309599604316 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTTT 900 0.0 16.710682 29 CTAGCGG 865 0.0 16.462006 29 CGTTTAT 930 0.0 16.171627 31 TCTAGCG 895 0.0 15.910205 28 CGGCATC 970 0.0 15.834644 25 CATCGTT 980 0.0 15.673068 28 ACCGTCG 695 0.0 15.425197 8 GCATCGT 1005 0.0 15.28319 27 CGTCGTA 680 0.0 15.058658 10 GTTTTCG 1000 0.0 15.039614 28 TCGTTTA 1015 0.0 14.974984 30 TTTTCGG 1000 0.0 14.879618 29 ATACCGT 735 0.0 14.803644 6 GGCATCG 1050 0.0 14.780573 26 TAGCGGC 970 0.0 14.680035 30 TACCGTC 715 0.0 14.546363 7 GTATCAA 4875 0.0 14.507998 1 CGCGTAA 455 0.0 14.417424 10 GTATTAG 855 0.0 14.223527 1 GCGTAAC 475 0.0 14.147213 11 >>END_MODULE