##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062715_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1355750 Sequences flagged as poor quality 0 Sequence length 50 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.962086667896 32.0 32.0 32.0 32.0 32.0 2 31.44087995574405 32.0 32.0 32.0 32.0 32.0 3 31.529845472985432 32.0 32.0 32.0 32.0 32.0 4 31.63298543241748 32.0 32.0 32.0 32.0 32.0 5 31.596089987092014 32.0 32.0 32.0 32.0 32.0 6 35.15717278259266 36.0 36.0 36.0 36.0 36.0 7 35.18170680435183 36.0 36.0 36.0 36.0 36.0 8 35.12512557624931 36.0 36.0 36.0 36.0 36.0 9 35.179239535312554 36.0 36.0 36.0 36.0 36.0 10 35.129760649087224 36.0 36.0 36.0 36.0 36.0 11 35.204545823345015 36.0 36.0 36.0 36.0 36.0 12 35.121739996312 36.0 36.0 36.0 36.0 36.0 13 35.149672137193434 36.0 36.0 36.0 36.0 36.0 14 35.10434298358842 36.0 36.0 36.0 36.0 36.0 15 35.10449861700166 36.0 36.0 36.0 36.0 36.0 16 35.1134869998156 36.0 36.0 36.0 36.0 36.0 17 35.126337451595056 36.0 36.0 36.0 36.0 36.0 18 35.11441784989858 36.0 36.0 36.0 36.0 36.0 19 35.047329522404574 36.0 36.0 36.0 36.0 36.0 20 34.980956666052 36.0 36.0 36.0 36.0 36.0 21 34.92650046099945 36.0 36.0 36.0 36.0 36.0 22 34.92217960538447 36.0 36.0 36.0 36.0 36.0 23 34.9019826664208 36.0 36.0 36.0 36.0 36.0 24 34.89040457311451 36.0 36.0 36.0 36.0 36.0 25 34.86549437580675 36.0 36.0 36.0 36.0 36.0 26 34.8178735017518 36.0 36.0 36.0 32.0 36.0 27 34.77828729485525 36.0 36.0 36.0 32.0 36.0 28 34.7363717499539 36.0 36.0 36.0 32.0 36.0 29 34.678973999631204 36.0 36.0 36.0 32.0 36.0 30 34.64146487184215 36.0 36.0 36.0 32.0 36.0 31 34.59506472432233 36.0 36.0 36.0 32.0 36.0 32 34.535457127051444 36.0 36.0 36.0 32.0 36.0 33 34.47208998709201 36.0 36.0 36.0 32.0 36.0 34 34.40306988751613 36.0 36.0 36.0 32.0 36.0 35 34.30700792919048 36.0 36.0 36.0 32.0 36.0 36 34.22625189009773 36.0 36.0 36.0 32.0 36.0 37 34.142808777429465 36.0 36.0 36.0 32.0 36.0 38 34.05672579752904 36.0 36.0 36.0 32.0 36.0 39 33.87146524064171 36.0 36.0 36.0 32.0 36.0 40 33.76992660888807 36.0 36.0 36.0 32.0 36.0 41 33.74617739258713 36.0 36.0 36.0 27.0 36.0 42 33.61157514290983 36.0 36.0 36.0 21.0 36.0 43 33.59518274018071 36.0 36.0 36.0 21.0 36.0 44 33.54892568688918 36.0 36.0 36.0 21.0 36.0 45 33.31691757329891 36.0 36.0 36.0 14.0 36.0 46 33.3075589157293 36.0 36.0 36.0 14.0 36.0 47 33.190270330075606 36.0 36.0 36.0 14.0 36.0 48 33.11422828692606 36.0 36.0 36.0 14.0 36.0 49 33.098105845472986 36.0 36.0 36.0 14.0 36.0 50 32.53880803983035 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 6.0 20 15.0 21 44.0 22 128.0 23 467.0 24 1315.0 25 3395.0 26 7454.0 27 15167.0 28 25472.0 29 36379.0 30 47175.0 31 62009.0 32 85336.0 33 110392.0 34 205878.0 35 755118.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.847383455007936 21.404721997627494 13.062585206650102 23.68530934071447 2 11.940075016873264 23.153880481966816 42.61880437709072 22.287240124069204 3 18.219878604952726 29.4384833658986 30.70642653195047 21.635211497198206 4 10.422283180736256 18.786884592944563 40.03757332662609 30.753258899693087 5 9.834999078001108 41.31381154342615 36.55024893970128 12.300940438871473 6 27.62892164166444 39.60262468043424 19.914497258336 12.853956419565316 7 24.343721187534577 34.27807486631016 24.054361054766733 17.32384289138853 8 24.780969942836066 37.48921261294487 22.047796422644293 15.682021021574775 9 26.839166513000183 15.402249677300386 22.077374147151023 35.681209662548405 10 15.030647243223308 28.768873317352018 35.64189562972525 20.558583809699428 11 31.53258344089987 23.50610363267564 26.843665867600958 18.11764705882353 12 23.13383735939517 27.005863912963306 32.89618292458049 16.964115803061038 13 29.153826295408447 23.120486815415823 27.9987460815047 19.72694080767103 14 20.60483127420247 24.606675271989673 28.447427623086853 26.341065830721007 15 22.39218144938226 32.51801585838097 27.10853770975475 17.98126498248202 16 20.147814862622166 28.61442006269592 31.938853033376358 19.29891204130555 17 18.568467637838832 29.754748294302047 31.87777982666421 19.79900424119491 18 19.780047943942467 25.912963304444038 36.587718974737236 17.719269776876267 19 21.62795500645399 29.25450857458971 29.85402913516504 19.26350728379126 20 21.278333026000368 27.92019177576987 33.34331550802139 17.458159690208372 21 21.033007560390928 27.485082057901533 28.435552277337266 23.046358104370274 22 20.642375069149917 31.18620689655172 28.74822054213535 19.42319749216301 23 18.717536418956296 30.383772819472615 30.70875898948921 20.189931772081874 24 20.445731145122625 30.780896182924582 30.552461737045917 18.22091093490688 25 21.119527936566477 28.99760280287664 30.42146413424304 19.46140512631385 26 16.92738336713996 29.553678775585468 33.16843075788309 20.35050709939148 27 19.81073206712152 31.022607412871107 30.999594320486818 18.16706619952056 28 18.301309238428914 29.251041858749772 30.98617001659598 21.461478886225336 29 19.108168910197307 29.340438871473356 31.172340033191958 20.37905218513738 30 20.00855614973262 28.426258528489768 31.86103632675641 19.704148995021207 31 20.031126682647983 27.968356997971604 30.812170385395536 21.188345933984877 32 17.438318274018073 30.96942651668818 31.707468191038167 19.88478701825558 33 17.88781117462659 30.895371565554118 32.23610547667343 18.98071178314586 34 17.85904480914623 30.7832565000922 33.59210768947077 17.765591001290797 35 19.470846394984324 31.123142172229397 31.19808224230131 18.207929190484972 36 18.686040936750874 30.064761202286554 31.967029319564816 19.282168541397752 37 19.660630647243224 30.3510234187719 29.395242485709016 20.593103448275862 38 19.364410842706988 32.02979900424119 29.008519269776876 19.597270883274938 39 19.699944680066384 29.62802876636548 29.95087589894892 20.721150654619215 40 21.25222201733358 29.85041489950212 30.46232712520745 18.43503595795685 41 19.89835884196939 28.51167250599299 31.871583994099208 19.718384657938408 42 20.166476120228655 31.824746450304257 30.43621611654066 17.572561312926425 43 17.996238244514107 30.978277706066752 30.341877189747375 20.68360685967177 44 17.795463765443483 30.36371012354785 32.01276046468744 19.828065646321225 45 18.932472801032638 30.586833855799373 30.7088327494007 19.771860593767286 46 19.23737927310868 28.83873527932223 30.878276609335376 21.045608838233708 47 21.630094043887148 28.573925871288953 30.353973815231424 19.442006269592476 48 18.124875530149364 32.30772635072838 28.292900608519272 21.274497510602988 49 18.812022865572562 29.09710492347409 31.68452885856537 20.406343352387974 50 16.886459071701328 33.46924836381956 27.85980295762711 21.784489606852006 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 66.0 1 84.0 2 102.0 3 291.5 4 481.0 5 520.0 6 559.0 7 556.0 8 553.0 9 824.0 10 1095.0 11 1571.0 12 2047.0 13 3677.0 14 5307.0 15 7806.5 16 10306.0 17 13581.0 18 16856.0 19 18785.5 20 20715.0 21 23188.5 22 25662.0 23 25405.5 24 25149.0 25 27334.0 26 29519.0 27 37207.5 28 44896.0 29 51724.5 30 58553.0 31 63393.5 32 68234.0 33 80714.0 34 93194.0 35 105997.5 36 118801.0 37 121384.5 38 123968.0 39 113719.5 40 103471.0 41 98328.0 42 93185.0 43 84487.5 44 75790.0 45 80093.5 46 84397.0 47 88046.0 48 91695.0 49 79491.0 50 67287.0 51 55572.5 52 43858.0 53 35740.0 54 27622.0 55 25451.0 56 23280.0 57 22881.0 58 22482.0 59 19727.0 60 16972.0 61 15628.0 62 14284.0 63 12995.0 64 11706.0 65 10666.5 66 9627.0 67 8366.5 68 7106.0 69 6408.5 70 5711.0 71 4849.5 72 3988.0 73 3413.5 74 2839.0 75 2316.0 76 1793.0 77 1468.0 78 1143.0 79 913.5 80 684.0 81 530.0 82 376.0 83 301.0 84 226.0 85 164.5 86 103.0 87 66.0 88 29.0 89 21.0 90 13.0 91 9.0 92 5.0 93 5.5 94 6.0 95 4.0 96 2.0 97 2.0 98 2.0 99 3.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01637470035035958 2 0.004056795131845842 3 8.113590263691685E-4 4 7.375991148810622E-5 5 0.0 6 2.950396459524249E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.950396459524249E-4 47 0.0 48 0.0 49 0.0 50 7.375991148810622E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1355750.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.79870944959432 #Duplication Level Percentage of deduplicated Percentage of total 1 72.57042103510533 28.156386803757794 2 14.007492380896574 10.869452540076246 3 5.364660412544198 6.244257019261294 4 2.516827394882556 3.9059861931531077 5 1.4317080481299782 2.7774212288020417 6 0.8807196501566142 2.05024714877849 7 0.5688067317874963 1.5448276983717477 8 0.4040069874982722 1.253995977884108 9 0.2960391143534356 1.033734202516276 >10 1.6159112672097327 11.527678065222478 >50 0.15473528764802677 4.218665411842341 >100 0.1545073372344654 12.741051465322183 >500 0.023416016918642424 6.376110584038436 >1k 0.010364466504972875 6.226057293682715 >5k 3.8386912981381026E-4 1.0741283672907709 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 7718 0.5692789968652037 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 6706 0.49463396643924024 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3678 0.2712889544532547 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 2954 0.21788677853586574 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 2859 0.21087958694449566 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 2425 0.17886778535865758 No Hit GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAACGGCCGCGGTAT 2357 0.17385211137746637 No Hit CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 2183 0.16101788677853587 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 2180 0.16079660704407156 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 2090 0.15415821501014199 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1999 0.14744606306472433 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 1892 0.13955375253549696 No Hit CTCTAATACTTGTAATGCTAGAGGTGATGTTTTTGGTAAACAGGCGGGGT 1884 0.1389636732435921 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 1882 0.13881615342061587 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1875 0.13829983404019916 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 1847 0.13623455651853217 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 1819 0.1341692789968652 No Hit GTACATGGGAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAA 1739 0.1282684860778167 No Hit CCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTAATTGTCGA 1724 0.12716208740549512 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 1717 0.12664576802507838 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 1700 0.12539184952978058 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 1691 0.12472801032638761 No Hit GATATATTTTGATCAACGGACCAAGTTACCCTAGGGATAACAGCGCAATC 1534 0.11314770422275493 No Hit CTTCTACACCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTA 1466 0.1081320302415637 No Hit ATCTATAACTTTATAGATGCAACACTGTTAGTATGAGTAACAAGAATTCC 1413 0.10422275493269409 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 1385 0.1021574774110271 No Hit GTTATAGATTAACCCAATTTTAAGTTTAGGAAGTTGGTGTAAATTATGGA 1381 0.1018624377650747 No Hit CTGTTAGTATGAGTAACAAGAATTCCAATTCTCCAGGCATACGCGTATAA 1368 0.1009035589157293 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 7.375991148810622E-5 0.0 5 0.0 0.0 0.0 7.375991148810622E-5 0.0 6 0.0 0.0 0.0 7.375991148810622E-5 0.0 7 0.0 0.0 0.0 7.375991148810622E-5 0.0 8 0.0 0.0 0.0 1.4751982297621244E-4 0.0 9 0.0 0.0 0.0 2.2127973446431863E-4 0.0 10 7.375991148810622E-5 0.0 0.0 2.2127973446431863E-4 0.0 11 7.375991148810622E-5 0.0 0.0 2.2127973446431863E-4 0.0 12 7.375991148810622E-5 0.0 0.0 2.2127973446431863E-4 0.0 13 7.375991148810622E-5 0.0 0.0 2.2127973446431863E-4 0.0 14 7.375991148810622E-5 0.0 0.0 2.2127973446431863E-4 0.0 15 7.375991148810622E-5 0.0 0.0 2.2127973446431863E-4 0.0 16 1.4751982297621244E-4 0.0 0.0 2.950396459524249E-4 0.0 17 1.4751982297621244E-4 0.0 0.0 5.163193804167435E-4 0.0 18 1.4751982297621244E-4 0.0 0.0 6.63839203392956E-4 0.0 19 1.4751982297621244E-4 0.0 0.0 9.588788493453807E-4 0.0 20 1.4751982297621244E-4 0.0 0.0 0.001327678406785912 0.0 21 2.2127973446431863E-4 0.0 0.0 0.0021390374331550803 0.0 22 2.2127973446431863E-4 0.0 0.0 0.003540475751429098 0.0 23 2.2127973446431863E-4 0.0 0.0 0.006195832565000922 0.0 24 2.2127973446431863E-4 0.0 0.0 0.011063986723215933 0.0 25 2.2127973446431863E-4 0.0 0.0 0.01401438318274018 0.0 26 2.2127973446431863E-4 0.0 0.0 0.019546376544348147 0.0 27 2.2127973446431863E-4 0.0 0.0 0.027881246542504148 0.0 28 2.2127973446431863E-4 0.0 0.0 0.04698506361792366 0.0 29 2.2127973446431863E-4 0.0 0.0 0.07907062511524986 0.0 30 2.2127973446431863E-4 0.0 0.0 0.13328416005900792 0.0 31 2.2127973446431863E-4 0.0 0.0 0.24495666605200073 0.0 32 2.2127973446431863E-4 0.0 0.0 0.3955006453992255 0.0 33 2.2127973446431863E-4 0.0 0.0 0.5216300940438872 0.0 34 2.2127973446431863E-4 0.0 0.0 0.6830167803798636 0.0 35 2.2127973446431863E-4 0.0 0.0 0.8568688917573299 0.0 36 2.2127973446431863E-4 0.0 0.0 1.093048128342246 0.0 37 2.2127973446431863E-4 0.0 0.0 1.4785911856905771 0.0 38 2.2127973446431863E-4 0.0 0.0 1.884860778167066 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGCC 40 1.8202878E-5 32.999863 4 ATACATG 305 0.0 26.692348 1 TAGGACC 1240 0.0 24.483768 4 ATAGGAC 225 0.0 24.444342 3 ACGGTAA 65 1.8136605E-5 23.69221 38 ACTGTTC 910 0.0 20.549364 8 TATAGGA 295 0.0 20.136251 2 AGTACGT 110 1.2659802E-7 19.999914 5 AGGACCT 2055 0.0 19.912325 5 TTGCGAG 100 1.123688E-6 19.799917 18 TGTAGGA 3535 0.0 19.542366 2 AACTTGC 215 0.0 19.44178 7 TTAGGAC 2055 0.0 19.377048 3 CTGTAGG 3345 0.0 19.273315 1 TGTCCAC 1440 0.0 19.24992 10 GTCCTAA 1770 0.0 19.143988 1 TCCTACA 3210 0.0 19.053583 2 GTAGTAC 185 1.8189894E-12 19.026949 3 TAGGACA 845 0.0 19.005838 4 GGACCTG 2015 0.0 18.997438 6 >>END_MODULE