##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062714_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1028299 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.22908414770412 32.0 32.0 32.0 32.0 32.0 2 31.413369068724176 32.0 32.0 32.0 32.0 32.0 3 31.506060007838187 32.0 32.0 32.0 32.0 32.0 4 31.607785284241256 32.0 32.0 32.0 32.0 32.0 5 31.553514104360698 32.0 32.0 32.0 32.0 32.0 6 35.13790152475107 36.0 36.0 36.0 36.0 36.0 7 35.15265112579123 36.0 36.0 36.0 36.0 36.0 8 35.08969959126674 36.0 36.0 36.0 36.0 36.0 9 35.208991742674066 36.0 36.0 36.0 36.0 36.0 10 35.10587776512474 36.0 36.0 36.0 36.0 36.0 11 35.22194517353416 36.0 36.0 36.0 36.0 36.0 12 35.14322876906425 36.0 36.0 36.0 36.0 36.0 13 35.169879577827075 36.0 36.0 36.0 36.0 36.0 14 35.14627068586083 36.0 36.0 36.0 36.0 36.0 15 35.0982389363405 36.0 36.0 36.0 36.0 36.0 16 35.11330459331381 36.0 36.0 36.0 36.0 36.0 17 35.09563755289074 36.0 36.0 36.0 36.0 36.0 18 35.111071779706094 36.0 36.0 36.0 36.0 36.0 19 35.08508711960237 36.0 36.0 36.0 36.0 36.0 20 35.059650938102635 36.0 36.0 36.0 36.0 36.0 21 35.04827778690828 36.0 36.0 36.0 36.0 36.0 22 35.03360112185269 36.0 36.0 36.0 36.0 36.0 23 35.002342703824475 36.0 36.0 36.0 36.0 36.0 24 34.98735776267409 36.0 36.0 36.0 36.0 36.0 25 34.958312708657694 36.0 36.0 36.0 36.0 36.0 26 34.913049609111745 36.0 36.0 36.0 32.0 36.0 27 34.897057178894464 36.0 36.0 36.0 32.0 36.0 28 34.87842154859627 36.0 36.0 36.0 32.0 36.0 29 34.84997359717359 36.0 36.0 36.0 32.0 36.0 30 34.82833883918977 36.0 36.0 36.0 32.0 36.0 31 34.822550639454086 36.0 36.0 36.0 32.0 36.0 32 34.78769307370716 36.0 36.0 36.0 32.0 36.0 33 34.76165103729557 36.0 36.0 36.0 32.0 36.0 34 34.733805050865556 36.0 36.0 36.0 32.0 36.0 35 34.69351715794725 36.0 36.0 36.0 32.0 36.0 36 34.65020096294949 36.0 36.0 36.0 32.0 36.0 37 34.63178511308481 36.0 36.0 36.0 32.0 36.0 38 34.58734959384381 36.0 36.0 36.0 32.0 36.0 39 34.55026991176691 36.0 36.0 36.0 32.0 36.0 40 34.53840176835726 36.0 36.0 36.0 32.0 36.0 41 34.50339735816139 36.0 36.0 36.0 32.0 36.0 42 34.46301610718283 36.0 36.0 36.0 32.0 36.0 43 34.44900753574593 36.0 36.0 36.0 32.0 36.0 44 34.411355063070175 36.0 36.0 36.0 32.0 36.0 45 34.34483355522081 36.0 36.0 36.0 32.0 36.0 46 34.337541901723135 36.0 36.0 36.0 32.0 36.0 47 34.2869700349801 36.0 36.0 36.0 32.0 36.0 48 34.2442412177781 36.0 36.0 36.0 32.0 36.0 49 34.23153868670494 36.0 36.0 36.0 32.0 36.0 50 33.70611563368242 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 5.0 20 9.0 21 31.0 22 113.0 23 287.0 24 757.0 25 1723.0 26 3553.0 27 6779.0 28 11461.0 29 17241.0 30 24680.0 31 34287.0 32 50622.0 33 79846.0 34 171549.0 35 625355.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.080661617453536 18.117642710624065 11.568287414153811 26.233408257768588 2 15.670857245110426 21.037890259166222 37.45272348698139 25.83852900874196 3 19.121828734138806 24.689972537090487 28.66412005881575 27.524078669954953 4 12.361056273789403 16.148105502900922 36.38881487201131 35.102023351298364 5 13.784803836238293 37.34225162136694 34.015009253145244 14.857935289249527 6 33.43479588522349 35.835276681571614 17.100459596185527 13.629467837019375 7 29.131604718082972 30.98787414944486 21.179637440083088 18.70088369238908 8 27.60306097740054 33.66890369435349 20.005465336443972 18.722569991801997 9 27.63573629848906 14.161153516632808 18.73540672508677 39.467703459791366 10 15.399898278613517 27.43871189216366 32.713539544432116 24.447850284790707 11 36.98389281716699 21.394360978664768 22.525354979436916 19.09639122473133 12 24.123431025411872 24.029781221220674 29.84375167144965 22.003036081917806 13 30.087552355880927 20.05875722917167 25.36412074698118 24.489569667966222 14 22.914735889075065 20.11088214614621 25.894413978813557 31.079967985965173 15 24.81875407833714 27.86232409056121 23.189655926923976 24.12926590417768 16 24.719366643359567 26.18917260446621 25.261524128682417 23.829936623491804 17 23.2743589170076 26.152801860159354 26.422373259139608 24.150465963693442 18 23.85249815471959 25.34583812684832 27.84802863758498 22.953635080847107 19 24.943134244028244 25.625037075792157 26.171084480292212 23.260744199887387 20 24.887800143732512 25.031240913391922 26.666368439529748 23.414590503345817 21 25.511062443900073 24.82021279802859 25.25471677012231 24.41400798794903 22 24.73123089685004 25.618132469252618 25.876714846557274 23.773921787340065 23 23.6874683336267 25.330083954180644 26.251605807260344 24.730841904932323 24 23.976781072431265 25.841511078003577 26.22709931644395 23.954608533121203 25 24.254035061786503 25.274555357926047 26.399617231952966 24.071792348334483 26 23.207257811200826 25.986410567354433 26.83664965151187 23.969681969932868 27 24.381429914839945 25.820797258384964 26.20453778521617 23.593235041558923 28 23.50931003531074 25.697097828549868 26.418872331880124 24.374719804259268 29 23.52700916756702 25.783648530242665 26.429764105576297 24.259578196614022 30 23.97765630424614 25.703710691151116 26.60588019632422 23.712752808278527 31 23.862514696600893 25.558519457861966 26.120807274926843 24.4581585706103 32 23.605293791008258 26.1694312646419 26.21338735134431 24.011887593005536 33 23.568047814886526 25.528372584238628 26.62396832049822 24.279611280376624 34 23.72520054964558 25.921643413053985 26.926993024402435 23.426163012897998 35 24.40369970212944 25.724035518852006 26.516801047166243 23.35546373185231 36 23.4823723450086 26.034840061110632 26.469927521080933 24.01286007279984 37 24.25977269257288 25.895386458607856 25.90394428079771 23.940896568021557 38 23.763030013643892 25.886050652582565 26.124891690062913 24.226027643710633 39 24.01470778440901 25.510284460064632 26.164666113649826 24.310341641876537 40 24.52370370874619 25.678620712458144 26.391545649660266 23.406129929135396 41 23.493264118704772 25.542862533173714 27.04903923858722 23.91483410953429 42 24.345934402347954 26.22457086897877 26.317248193375665 23.11224653529761 43 23.49861275757343 25.501532141915924 26.572621387359124 24.427233713151526 44 23.157175101794323 25.840538598209278 26.682317108156283 24.319969191840116 45 23.355949971749464 26.042522651485612 26.455632068104705 24.145895308660222 46 23.259233470485665 25.357946196478252 26.5072250526842 24.875595280351884 47 23.675140863835193 25.4721880233162 26.73048085282671 24.1221902600219 48 23.60733599857629 26.29964630909881 25.893247003060395 24.199770689264504 49 23.14550534426271 25.7714925328139 26.764588898754155 24.318413224169237 50 22.872844253319563 26.77881314560565 25.79427364441047 24.554068956664313 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 53.0 1 46.0 2 39.0 3 140.0 4 241.0 5 286.0 6 331.0 7 295.5 8 260.0 9 349.0 10 438.0 11 644.0 12 850.0 13 1415.0 14 1980.0 15 2681.0 16 3382.0 17 4007.0 18 4632.0 19 5044.0 20 5456.0 21 6310.5 22 7165.0 23 7614.0 24 8063.0 25 8998.0 26 9933.0 27 12409.5 28 14886.0 29 17067.5 30 19249.0 31 21174.0 32 23099.0 33 26868.5 34 30638.0 35 34984.5 36 39331.0 37 43264.5 38 47198.0 39 48736.0 40 50274.0 41 52686.0 42 55098.0 43 56257.5 44 57417.0 45 62169.0 46 66921.0 47 69718.0 48 72515.0 49 72766.5 50 73018.0 51 70075.0 52 67132.0 53 64486.0 54 61840.0 55 61844.0 56 61848.0 57 60359.5 58 58871.0 59 53705.0 60 48539.0 61 42776.5 62 37014.0 63 32715.5 64 28417.0 65 24404.5 66 20392.0 67 18530.5 68 16669.0 69 14909.0 70 13149.0 71 10421.5 72 7694.0 73 6691.5 74 5689.0 75 4328.5 76 2968.0 77 2526.5 78 2085.0 79 1787.5 80 1490.0 81 1184.0 82 878.0 83 726.5 84 575.0 85 449.5 86 324.0 87 249.0 88 174.0 89 111.0 90 48.0 91 32.5 92 17.0 93 12.5 94 8.0 95 5.5 96 3.0 97 4.5 98 6.0 99 4.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014781692873376323 2 0.0038899191772042954 3 2.917439382903222E-4 4 4.8623989715053693E-4 5 0.0 6 4.8623989715053693E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.9449595886021477E-4 47 9.724797943010738E-5 48 0.0 49 0.0 50 9.724797943010738E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1028299.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.729766760217835 #Duplication Level Percentage of deduplicated Percentage of total 1 80.68921895463811 51.42305104043234 2 12.713192789106408 16.204176224548693 3 3.3390608873819296 6.383927146530491 4 1.204670061167614 3.070933680849176 5 0.5773124804839733 1.8395994864503213 6 0.3409588842034897 1.3037538099067512 7 0.18668459558102382 0.8328156013872968 8 0.14079650070908142 0.7178342520675682 9 0.098952675036637 0.5675607810346055 >10 0.581349334155347 7.197912418220802 >50 0.07089391372687029 3.1900900942094115 >100 0.055068204318569694 6.442297238236244 >500 0.001533932909116545 0.6176299044574938 >1k 3.06786581823309E-4 0.2084183216687839 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1129 0.10979296877659124 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 9.72479794301074E-5 11 0.0 0.0 0.0 0.0 9.72479794301074E-5 12 0.0 0.0 0.0 0.0 9.72479794301074E-5 13 0.0 0.0 0.0 0.0 9.72479794301074E-5 14 0.0 0.0 0.0 0.0 9.72479794301074E-5 15 0.0 0.0 0.0 0.0 9.72479794301074E-5 16 0.0 0.0 0.0 9.72479794301074E-5 1.944959588602148E-4 17 0.0 0.0 0.0 9.72479794301074E-5 1.944959588602148E-4 18 0.0 0.0 0.0 2.917439382903222E-4 1.944959588602148E-4 19 0.0 0.0 0.0 3.889919177204296E-4 1.944959588602148E-4 20 0.0 0.0 0.0 5.834878765806444E-4 1.944959588602148E-4 21 0.0 0.0 0.0 0.001264223732591396 2.917439382903222E-4 22 0.0 0.0 0.0 0.0018477116091720404 2.917439382903222E-4 23 0.0 0.0 0.0 0.003792671197774188 2.917439382903222E-4 24 0.0 0.0 0.0 0.007488094416118269 2.917439382903222E-4 25 0.0 0.0 0.0 0.00933580602529031 2.917439382903222E-4 26 0.0 0.0 0.0 0.012155997428763424 2.917439382903222E-4 27 0.0 0.0 0.0 0.016143164585397825 2.917439382903222E-4 28 0.0 0.0 0.0 0.02645145040498921 2.917439382903222E-4 29 0.0 0.0 0.0 0.04580379831158058 2.917439382903222E-4 30 0.0 0.0 0.0 0.08061857494755903 2.917439382903222E-4 31 0.0 0.0 0.0 0.15209583982868796 2.917439382903222E-4 32 0.0 0.0 0.0 0.24243921271925772 2.917439382903222E-4 33 0.0 0.0 0.0 0.328698170473763 2.917439382903222E-4 34 0.0 0.0 0.0 0.42857184534848325 2.917439382903222E-4 35 0.0 0.0 0.0 0.5459501565206228 2.917439382903222E-4 36 0.0 0.0 0.0 0.6993102200819022 2.917439382903222E-4 37 0.0 0.0 0.0 0.9322191308170095 2.917439382903222E-4 38 0.0 0.0 0.0 1.2172529585266543 2.917439382903222E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTAGGA 680 0.0 21.353886 2 GTAGGAC 730 0.0 20.79443 3 CACGCGA 55 0.00448328 19.999912 10 TAGGACG 480 0.0 19.708246 4 GTATTAG 255 0.0 18.983078 1 GCGTTCT 60 0.0074115577 18.333252 11 CTGTAGG 785 0.0 18.219137 1 CGCTTCG 145 6.3046173E-9 18.206818 32 TCAATAC 85 1.4306176E-4 18.117567 3 CGAAAAC 220 0.0 17.99992 23 ACGGTAT 185 2.1827873E-11 17.837759 9 GATATAC 375 0.0 17.60249 1 CGCAATA 175 1.9099389E-10 17.599922 36 GTAAACG 165 1.6589183E-9 17.333258 27 TACACCG 90 2.2150412E-4 17.111034 5 GGACGTG 555 0.0 17.04497 6 AGGACGT 535 0.0 16.859737 5 CCGCTAG 235 0.0 16.85099 36 AACCGCG 250 0.0 16.719925 41 CGGTCCA 185 4.2200554E-10 16.648575 10 >>END_MODULE