##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062712_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 815147 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.248647176521537 32.0 32.0 32.0 32.0 32.0 2 31.359941213057276 32.0 32.0 32.0 32.0 32.0 3 31.481683671779447 32.0 32.0 32.0 32.0 32.0 4 31.596427392850615 32.0 32.0 32.0 32.0 32.0 5 31.52478264656559 32.0 32.0 32.0 32.0 32.0 6 35.12236197888234 36.0 36.0 36.0 36.0 36.0 7 35.13572521275304 36.0 36.0 36.0 36.0 36.0 8 35.06768227080514 36.0 36.0 36.0 36.0 36.0 9 35.21308058546495 36.0 36.0 36.0 36.0 36.0 10 35.071379763404636 36.0 36.0 36.0 36.0 36.0 11 35.21062949382136 36.0 36.0 36.0 36.0 36.0 12 35.125493929315816 36.0 36.0 36.0 36.0 36.0 13 35.172854712094875 36.0 36.0 36.0 36.0 36.0 14 35.12903562179582 36.0 36.0 36.0 36.0 36.0 15 35.08359841844477 36.0 36.0 36.0 36.0 36.0 16 35.10566560387267 36.0 36.0 36.0 36.0 36.0 17 35.068923764670664 36.0 36.0 36.0 36.0 36.0 18 35.09720455328916 36.0 36.0 36.0 36.0 36.0 19 35.06445340533671 36.0 36.0 36.0 36.0 36.0 20 35.05837720067669 36.0 36.0 36.0 36.0 36.0 21 35.03588432515853 36.0 36.0 36.0 36.0 36.0 22 35.01033923942553 36.0 36.0 36.0 36.0 36.0 23 34.95994096770276 36.0 36.0 36.0 32.0 36.0 24 34.933475802523965 36.0 36.0 36.0 32.0 36.0 25 34.89666035696629 36.0 36.0 36.0 32.0 36.0 26 34.85682582405382 36.0 36.0 36.0 32.0 36.0 27 34.812849706862686 36.0 36.0 36.0 32.0 36.0 28 34.793415175422346 36.0 36.0 36.0 32.0 36.0 29 34.766713243132834 36.0 36.0 36.0 32.0 36.0 30 34.742868464215654 36.0 36.0 36.0 32.0 36.0 31 34.73797732188182 36.0 36.0 36.0 32.0 36.0 32 34.68573643772228 36.0 36.0 36.0 32.0 36.0 33 34.68146972263899 36.0 36.0 36.0 32.0 36.0 34 34.6528159951518 36.0 36.0 36.0 32.0 36.0 35 34.60533008156811 36.0 36.0 36.0 32.0 36.0 36 34.584095874731794 36.0 36.0 36.0 32.0 36.0 37 34.54644131671956 36.0 36.0 36.0 32.0 36.0 38 34.48024098720844 36.0 36.0 36.0 32.0 36.0 39 34.408970406564706 36.0 36.0 36.0 32.0 36.0 40 34.389968925850184 36.0 36.0 36.0 32.0 36.0 41 34.3755089572801 36.0 36.0 36.0 32.0 36.0 42 34.29054636771036 36.0 36.0 36.0 32.0 36.0 43 34.30817508989176 36.0 36.0 36.0 32.0 36.0 44 34.27729967723613 36.0 36.0 36.0 32.0 36.0 45 34.174016465741765 36.0 36.0 36.0 32.0 36.0 46 34.22162628335748 36.0 36.0 36.0 32.0 36.0 47 34.17025027387698 36.0 36.0 36.0 32.0 36.0 48 34.163504251380424 36.0 36.0 36.0 32.0 36.0 49 34.16804576352486 36.0 36.0 36.0 32.0 36.0 50 33.629535531628036 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 8.0 21 24.0 22 62.0 23 198.0 24 546.0 25 1378.0 26 2808.0 27 5471.0 28 9185.0 29 13883.0 30 20317.0 31 28963.0 32 43694.0 33 68391.0 34 149010.0 35 471207.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.74572444821794 17.58304183470525 11.613403497492763 26.057830219584044 2 15.555869074492099 20.3563892433016 37.53557758366866 26.552164098537638 3 19.33464435074582 23.89531652728417 28.35698766964815 28.413051452321863 4 12.218562341669273 15.507547736905705 35.94415717449043 36.329732746934596 5 13.907430193572448 37.061658817366684 33.766056919794835 15.264854069266034 6 34.868280618591605 34.97979493143526 16.60115660829647 13.550767841676665 7 30.288033937437053 30.38323149076179 20.395707768046744 18.933026803754416 8 28.08119271738717 33.88345905707805 19.385460536565795 18.649887688968985 9 27.133878919998477 14.35029510014758 18.28835780540197 40.22746817445197 10 15.553145628947906 27.25753759751309 31.956444665808743 25.232872107730266 11 37.87660385182059 20.766070414293374 21.904760736407052 19.452564997478984 12 24.237100792863128 23.618194018992895 29.20221751414162 22.942487674002358 13 30.20154646953249 19.365341466017785 25.148592830495602 25.28451923395412 14 23.19557086022521 19.8759242198033 24.814910684821264 32.113594235150224 15 25.142704322042526 27.88049272094481 22.44454067793907 24.532262279073592 16 25.674632918970442 25.836689578689487 24.607586116369195 23.881091385970873 17 23.819016692694692 26.372175816141137 25.826630043415484 23.982177447748686 18 25.013034458815405 24.585626886929596 27.358378304772025 23.04296034948298 19 25.365486225183925 25.97580559089342 24.851836539912433 23.806871644010222 20 25.25924771850967 24.513738012898287 26.11136396257362 24.115650306018424 21 25.96525534658166 24.93881471685475 23.95518845067209 25.1407414858915 22 24.997577124126078 25.672792760078856 24.870360806087735 24.45926930970733 23 23.602614007044128 25.10577846695136 25.37039331556149 25.921214210443022 24 24.208639668673257 25.9085784527208 25.29580554182252 24.586976336783426 25 24.987149557073753 24.96617174570967 25.009231463772792 25.037447233443782 26 23.547286563037094 25.81730657169811 25.955563843085972 24.679843022178822 27 25.033153529363418 25.625807369713684 25.257162205099203 24.083876895823696 28 24.10227848473956 25.07032473897346 25.48656868025031 25.340828096036667 29 23.67401217203768 25.549747468861444 25.793875215145246 24.98236514395563 30 24.367384042387446 25.335552973880787 25.958998806350266 24.3380641773815 31 24.473377194542824 25.177176631944914 25.026038248315945 25.32340792519631 32 24.143498043911098 25.698923016339386 25.16662638763315 24.990952552116365 33 23.675852330929267 25.222935249715693 25.827120752453236 25.2740916669018 34 24.166806723204527 25.759157550723984 26.298937492255998 23.775098233815495 35 25.351991726645622 25.316047289629967 25.66813102422017 23.663829959504238 36 23.827604100855428 26.001322460856752 25.679540009348006 24.49153342893981 37 25.200485311238342 25.61243554843482 25.19655963893629 23.990519501390548 38 24.426023772399333 25.463628032735198 25.083451205733443 25.02689698913202 39 24.808163435552117 25.035116365514444 25.404374916426114 24.752345282507328 40 25.64396360411067 25.120009029046297 25.214715873333276 24.02131149350976 41 23.90599486963701 25.270411349118625 26.320037980879523 24.503555800364843 42 25.759402905242858 25.968812987105395 25.34561250915479 22.926171598496957 43 24.383945472411725 24.643407876125412 25.679540009348006 25.29310664211486 44 23.92513252210951 25.56949850763114 25.993225761733775 24.51214320852558 45 24.34113110886748 25.76970779503574 25.499817824269734 24.389343271827045 46 23.816101655408968 24.891123798681463 26.160712314113056 25.132062231796514 47 24.775807033341266 24.667850912597252 26.381777006818414 24.17456504724307 48 24.553362767697116 26.322368848808864 24.807918081033236 24.316350302460783 49 23.933719930270243 25.453323142942313 26.208892383827703 24.404064542959738 50 23.605190229492347 26.738244758307395 24.649664416356803 25.00690059584345 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 9.0 1 8.5 2 8.0 3 27.5 4 47.0 5 61.5 6 76.0 7 79.0 8 82.0 9 106.0 10 130.0 11 199.5 12 269.0 13 485.5 14 702.0 15 933.0 16 1164.0 17 1424.5 18 1685.0 19 1914.0 20 2143.0 21 2731.0 22 3319.0 23 3811.0 24 4303.0 25 5068.0 26 5833.0 27 7529.5 28 9226.0 29 10686.0 30 12146.0 31 13901.0 32 15656.0 33 18378.5 34 21101.0 35 24640.0 36 28179.0 37 31586.5 38 34994.0 39 36343.5 40 37693.0 41 39481.0 42 41269.0 43 42684.5 44 44100.0 45 49899.5 46 55699.0 47 60652.5 48 65606.0 49 65163.5 50 64721.0 51 60419.5 52 56118.0 53 54238.0 54 52358.0 55 52730.5 56 53103.0 57 51584.0 58 50065.0 59 45663.0 60 41261.0 61 36495.5 62 31730.0 63 27657.0 64 23584.0 65 20141.0 66 16698.0 67 14730.0 68 12762.0 69 11753.5 70 10745.0 71 8268.0 72 5791.0 73 5170.5 74 4550.0 75 3253.5 76 1957.0 77 1759.5 78 1562.0 79 1325.0 80 1088.0 81 896.5 82 705.0 83 584.0 84 463.0 85 358.5 86 254.0 87 190.5 88 127.0 89 84.5 90 42.0 91 29.0 92 16.0 93 11.0 94 6.0 95 3.0 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.013003789500544075 2 0.003312286004855566 3 4.907090377563801E-4 4 2.4535451887819007E-4 5 0.0 6 6.133862971954752E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.2267725943909504E-4 47 1.2267725943909504E-4 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 815147.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.920317896602214 #Duplication Level Percentage of deduplicated Percentage of total 1 81.66219173018499 48.93224488605965 2 11.526240013909238 13.813119315719566 3 3.030238752797056 5.44718608110609 4 1.2612738789146882 3.0230372711699474 5 0.6377109814508852 1.9105922367345625 6 0.3663064637703671 1.316951985402036 7 0.2629377365342855 1.1028718932103199 8 0.18084915681549377 0.8669231174173481 9 0.13280184139020929 0.7161775698019939 >10 0.778620263740718 8.625804838160445 >50 0.0812362063379759 3.3827863524867774 >100 0.07466969740823017 8.637111543391306 >500 0.004513003683734119 1.8193161493200452 >1k 4.1027306215764715E-4 0.40587676001991685 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1693 0.2076926002303879 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1609 0.19738771043750392 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 978 0.11997835973143495 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 875 0.10734260200920816 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 865 0.10611582941481719 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 821 0.10071802999949701 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 817 0.10022732096174064 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 2.4535451887819007E-4 6 0.0 0.0 0.0 0.0 4.907090377563801E-4 7 0.0 0.0 0.0 0.0 4.907090377563801E-4 8 0.0 0.0 0.0 0.0 4.907090377563801E-4 9 0.0 0.0 0.0 1.2267725943909504E-4 4.907090377563801E-4 10 0.0 0.0 0.0 1.2267725943909504E-4 4.907090377563801E-4 11 0.0 0.0 0.0 1.2267725943909504E-4 4.907090377563801E-4 12 0.0 0.0 0.0 1.2267725943909504E-4 4.907090377563801E-4 13 0.0 0.0 0.0 1.2267725943909504E-4 7.360635566345702E-4 14 0.0 0.0 0.0 1.2267725943909504E-4 7.360635566345702E-4 15 0.0 0.0 0.0 1.2267725943909504E-4 0.0011040953349518553 16 0.0 0.0 0.0 3.680317783172851E-4 0.0011040953349518553 17 0.0 0.0 0.0 4.907090377563801E-4 0.0011040953349518553 18 0.0 0.0 0.0 6.133862971954752E-4 0.0011040953349518553 19 0.0 0.0 0.0 7.360635566345702E-4 0.0011040953349518553 20 0.0 0.0 0.0 8.587408160736652E-4 0.0011040953349518553 21 0.0 0.0 0.0 0.0011040953349518553 0.0011040953349518553 22 0.0 0.0 0.0 0.002698899707660091 0.0011040953349518553 23 0.0 0.0 0.0 0.0046617358586856115 0.0011040953349518553 24 0.0 0.0 0.0 0.006747249269150227 0.0011040953349518553 25 0.0 0.0 0.0 0.008587408160736653 0.0011040953349518553 26 0.0 0.0 0.0 0.011899694165592218 0.0011040953349518553 27 0.0 0.0 0.0 0.015457334689325974 0.0013494498538300455 28 0.0 0.0 0.0 0.02318600203398896 0.0013494498538300455 29 0.0 0.0 0.0 0.03189608745416471 0.0013494498538300455 30 0.0 0.0 0.0 0.05054303088890715 0.0013494498538300455 31 0.0 0.0 0.0 0.08943172213110027 0.0013494498538300455 32 0.0 0.0 0.0 0.13003789500544075 0.0013494498538300455 33 0.0 0.0 0.0 0.17223887225248943 0.0014721271132691403 34 0.0 0.0 0.0 0.22462206203298302 0.0014721271132691403 35 0.0 0.0 0.0 0.2815443104127231 0.0014721271132691403 36 0.0 0.0 0.0 0.3657009103879423 0.0014721271132691403 37 0.0 0.0 0.0 0.4790546981096661 0.0014721271132691403 38 0.0 0.0 0.0 0.6205015782429427 0.0014721271132691403 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTATAC 50 8.33863E-5 26.39978 3 GCCCGTA 50 8.33863E-5 26.39978 7 TAACGGC 75 2.063045E-6 23.466469 36 TTAACGG 85 2.3508983E-7 23.293922 35 GTATAGT 60 2.865877E-4 22.006565 1 GTATTAG 220 0.0 21.006268 1 TGTAGGA 560 0.0 20.82253 2 AGCGAAA 245 0.0 20.652885 17 CGTCGTA 185 0.0 20.216047 10 CGTCGTG 55 0.0044825985 19.999834 29 GCGAAAG 255 0.0 19.84297 18 TATTAGG 100 1.1219472E-6 19.80105 2 ACCGTCG 190 0.0 19.684046 8 GTAGGAC 560 0.0 19.642693 3 ATACACT 370 0.0 19.621456 4 CCTAATA 90 1.0008454E-5 19.556591 2 AAACGCT 180 0.0 19.555391 29 CAGAGCG 260 0.0 19.461374 14 AATGCCG 125 2.2853783E-8 19.359838 18 CTGTAGG 580 0.0 19.350601 1 >>END_MODULE