##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062709_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 928244 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.238662463748756 32.0 32.0 32.0 32.0 32.0 2 31.366342254838166 32.0 32.0 32.0 32.0 32.0 3 31.475392246004283 32.0 32.0 32.0 32.0 32.0 4 31.58324104438057 32.0 32.0 32.0 32.0 32.0 5 31.52725791925399 32.0 32.0 32.0 32.0 32.0 6 35.09830712614356 36.0 36.0 36.0 36.0 36.0 7 35.114672435264865 36.0 36.0 36.0 36.0 36.0 8 35.056954852387946 36.0 36.0 36.0 36.0 36.0 9 35.17813419747394 36.0 36.0 36.0 36.0 36.0 10 35.06383019981815 36.0 36.0 36.0 36.0 36.0 11 35.195413059497284 36.0 36.0 36.0 36.0 36.0 12 35.1069363227772 36.0 36.0 36.0 36.0 36.0 13 35.14689564381779 36.0 36.0 36.0 36.0 36.0 14 35.10772490853698 36.0 36.0 36.0 36.0 36.0 15 35.06904865531046 36.0 36.0 36.0 36.0 36.0 16 35.079645007131745 36.0 36.0 36.0 36.0 36.0 17 35.05513528770452 36.0 36.0 36.0 36.0 36.0 18 35.0717279077484 36.0 36.0 36.0 36.0 36.0 19 35.04294021830467 36.0 36.0 36.0 36.0 36.0 20 35.03270907218361 36.0 36.0 36.0 36.0 36.0 21 35.021504044195275 36.0 36.0 36.0 36.0 36.0 22 34.99868784500627 36.0 36.0 36.0 36.0 36.0 23 34.95393560313883 36.0 36.0 36.0 32.0 36.0 24 34.93657055687944 36.0 36.0 36.0 32.0 36.0 25 34.89938960014824 36.0 36.0 36.0 32.0 36.0 26 34.846281796596585 36.0 36.0 36.0 32.0 36.0 27 34.82244646881639 36.0 36.0 36.0 32.0 36.0 28 34.79020602341626 36.0 36.0 36.0 32.0 36.0 29 34.77290238342505 36.0 36.0 36.0 32.0 36.0 30 34.754233800595536 36.0 36.0 36.0 32.0 36.0 31 34.74508103472794 36.0 36.0 36.0 32.0 36.0 32 34.7090721836069 36.0 36.0 36.0 32.0 36.0 33 34.68703702905702 36.0 36.0 36.0 32.0 36.0 34 34.66179366632049 36.0 36.0 36.0 32.0 36.0 35 34.62788986516476 36.0 36.0 36.0 32.0 36.0 36 34.60245905171485 36.0 36.0 36.0 32.0 36.0 37 34.57176130413986 36.0 36.0 36.0 32.0 36.0 38 34.529461003787794 36.0 36.0 36.0 32.0 36.0 39 34.48181081698347 36.0 36.0 36.0 32.0 36.0 40 34.46433157661132 36.0 36.0 36.0 32.0 36.0 41 34.44257436622267 36.0 36.0 36.0 32.0 36.0 42 34.382641848479494 36.0 36.0 36.0 32.0 36.0 43 34.3800530894894 36.0 36.0 36.0 32.0 36.0 44 34.34894058027846 36.0 36.0 36.0 32.0 36.0 45 34.28126656353287 36.0 36.0 36.0 32.0 36.0 46 34.28904361353265 36.0 36.0 36.0 32.0 36.0 47 34.24283916728791 36.0 36.0 36.0 32.0 36.0 48 34.200307246801486 36.0 36.0 36.0 32.0 36.0 49 34.19498967943773 36.0 36.0 36.0 32.0 36.0 50 33.6944025493297 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 5.0 21 34.0 22 125.0 23 340.0 24 806.0 25 1871.0 26 3634.0 27 6784.0 28 10940.0 29 16310.0 30 23147.0 31 32455.0 32 46842.0 33 73475.0 34 158388.0 35 553087.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.36475988320098 18.286265340645844 12.782488767253176 25.566486008899997 2 15.073103620651947 20.33359082011155 39.26102372002676 25.33228183920974 3 18.85548872650255 24.727898741595645 28.709739625247376 27.70687290665443 4 12.271463399131477 16.556117309799266 36.50778944737531 34.664629843693945 5 13.92080099628977 37.276836693800334 33.59526159070245 15.20710071920745 6 33.254869430319744 35.95600275790744 17.220977333448246 13.56815047832457 7 29.413925648859568 30.825623435217466 20.885349110794145 18.875101805128825 8 27.238527800879943 34.53229969706241 19.40351890235757 18.82565359970008 9 27.1832621595184 14.966108049176723 18.82877777825658 39.02185201304829 10 16.139829613765347 27.177013802405405 31.375586591456557 25.3075699923727 11 36.71814738366205 21.311853348903952 22.81576826782613 19.15423099960786 12 24.967357720599324 23.54219364735996 29.357798165137616 22.132650466903097 13 29.761463580696457 20.086098051805344 25.331701578464283 24.82073678903392 14 23.346663161841068 20.42727989623418 25.171183438837204 31.05487350308755 15 24.87923433924701 28.00944579227014 22.718164620509263 24.393155247973596 16 24.962725317912103 26.01869767000918 25.109561710067613 23.90901530201111 17 23.344077634759827 26.365481489780706 25.951258505306797 24.339182370152677 18 24.295012949181466 25.018098689568692 27.75283222945691 22.934056131792936 19 25.48651001245362 25.12701401786599 25.560197534269008 23.82627843541138 20 25.502885017301484 24.735522125648 26.041428762265095 23.720164094785424 21 26.274772581347143 24.429244896815923 24.640827196297526 24.655155325539404 22 25.206949896794377 25.361327409603508 25.209535423875618 24.222187269726493 23 23.71693218593387 25.028225337303557 25.89814746984629 25.356695006916286 24 24.465550006248357 25.665342302239498 25.658232102766082 24.210875588746063 25 24.73735354066388 25.002370066491135 25.68602651888943 24.574249873955555 26 23.592180504263965 25.875955029065633 26.653336838158932 23.87852762851147 27 24.74123183128574 25.506547847333245 25.673852995548586 24.07836732583243 28 23.771335984934996 25.537143251127937 25.774042169946693 24.91747859399037 29 23.87174061992321 25.139510732091992 25.94027001521152 25.04847863277328 30 24.00058605280508 25.388906365136755 26.288992980293973 24.32151460176419 31 24.696416028544217 24.965634035878498 25.40614321234503 24.931806723232253 32 24.05897587272312 25.662218123682994 25.316619337157043 24.962186666436843 33 23.6007989278681 25.355402243375664 26.178892618751103 24.864906210005127 34 24.274975114301846 25.500299490220247 26.521474957015613 23.7032504384623 35 24.76299335088619 25.41853219627598 26.199684565696092 23.61878988714174 36 23.815613136201257 25.84428232232042 25.852577555039407 24.48752698643891 37 24.811364253364417 25.606198370256095 25.21190549036676 24.37053188601273 38 24.1913764053417 25.6249434415951 25.483816755077328 24.699863397985876 39 24.878264766591542 24.70837409129496 25.72394758274764 24.689413559365857 40 25.472289613506792 25.141880798583134 25.718453337700005 23.667376250210072 41 24.0918336127139 25.0435230392009 26.852206962824432 24.01243638526077 42 25.39687840697058 25.852469824744357 25.70735711730967 23.04329465097539 43 24.043570440530722 25.077565812437246 26.00684733755349 24.872016409478544 44 23.701203562856318 25.700139187541204 25.855917194186013 24.742740055416466 45 24.072549889899637 25.723408931272377 25.783845626796403 24.42019555203158 46 24.073166343654286 24.878668363065195 25.99820520748383 25.049960085796684 47 24.63048508797256 24.911014776287267 26.225539836508503 24.232960299231667 48 24.548610063733243 25.88511210414503 25.018421880453843 24.54785595166788 49 24.11176371729847 25.54425345060135 25.762838219261315 24.581144612838866 50 23.722749621866665 26.609813798958033 24.977807559219343 24.689629019955962 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 10.0 1 13.0 2 16.0 3 63.0 4 110.0 5 135.0 6 160.0 7 142.5 8 125.0 9 179.0 10 233.0 11 342.5 12 452.0 13 830.0 14 1208.0 15 1697.5 16 2187.0 17 2320.5 18 2454.0 19 2623.5 20 2793.0 21 3125.0 22 3457.0 23 3874.5 24 4292.0 25 5211.5 26 6131.0 27 8321.0 28 10511.0 29 12667.0 30 14823.0 31 17229.5 32 19636.0 33 23090.0 34 26544.0 35 30966.5 36 35389.0 37 38949.5 38 42510.0 39 43655.5 40 44801.0 41 46928.0 42 49055.0 43 49645.0 44 50235.0 45 56000.0 46 61765.0 47 66291.0 48 70817.0 49 71431.5 50 72046.0 51 68325.5 52 64605.0 53 62759.5 54 60914.0 55 60830.0 56 60746.0 57 58148.0 58 55550.0 59 50696.0 60 45842.0 61 40370.0 62 34898.0 63 30147.0 64 25396.0 65 21592.0 66 17788.0 67 15356.0 68 12924.0 69 11903.5 70 10883.0 71 8448.5 72 6014.0 73 5294.5 74 4575.0 75 3282.0 76 1989.0 77 1768.5 78 1548.0 79 1346.0 80 1144.0 81 915.5 82 687.0 83 570.0 84 453.0 85 375.5 86 298.0 87 224.0 88 150.0 89 97.0 90 44.0 91 27.5 92 11.0 93 11.0 94 11.0 95 7.5 96 4.0 97 5.5 98 7.0 99 5.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01659046543796674 2 0.004416942097121016 3 5.386514752586605E-4 4 1.0773029505173208E-4 5 0.0 6 4.3092118020692834E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 3.2319088515519626E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 928244.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.675577535378245 #Duplication Level Percentage of deduplicated Percentage of total 1 81.92027116191197 51.34400306927625 2 11.865055572512661 14.872984209931781 3 2.998544621979156 5.638065478444381 4 1.1217693323879583 2.8123016307556385 5 0.5731192861314931 1.796029112747751 6 0.3172693449896494 1.1931023658898465 7 0.21573443964476957 0.9464896419304992 8 0.15056492781241876 0.7549395045772703 9 0.10873221711728888 0.6133369054075398 >10 0.5888202546388721 6.953080347200339 >50 0.06911319251797833 3.074900092761066 >100 0.06616828073824778 7.9985568172932435 >500 0.0046646044883789034 1.8864591948500178 >1k 1.7276312919921864E-4 0.1157516289343743 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1069 0.11516368541030161 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0773029505173208E-4 2 0.0 0.0 0.0 0.0 1.0773029505173208E-4 3 0.0 0.0 0.0 0.0 1.0773029505173208E-4 4 0.0 0.0 0.0 0.0 1.0773029505173208E-4 5 0.0 0.0 0.0 0.0 1.0773029505173208E-4 6 0.0 0.0 0.0 0.0 1.0773029505173208E-4 7 0.0 0.0 0.0 0.0 1.0773029505173208E-4 8 0.0 0.0 0.0 0.0 1.0773029505173208E-4 9 0.0 0.0 0.0 0.0 1.0773029505173208E-4 10 0.0 0.0 0.0 0.0 1.0773029505173208E-4 11 0.0 0.0 0.0 0.0 1.0773029505173208E-4 12 0.0 0.0 0.0 0.0 3.2319088515519626E-4 13 0.0 0.0 0.0 0.0 3.2319088515519626E-4 14 0.0 0.0 0.0 0.0 3.2319088515519626E-4 15 0.0 0.0 0.0 0.0 5.386514752586605E-4 16 0.0 0.0 0.0 0.0 6.463817703103925E-4 17 0.0 0.0 0.0 0.0 6.463817703103925E-4 18 0.0 0.0 0.0 0.0 6.463817703103925E-4 19 0.0 0.0 0.0 2.1546059010346417E-4 6.463817703103925E-4 20 0.0 0.0 0.0 2.1546059010346417E-4 7.541120653621246E-4 21 0.0 0.0 0.0 2.1546059010346417E-4 8.618423604138567E-4 22 0.0 0.0 0.0 4.3092118020692834E-4 8.618423604138567E-4 23 0.0 0.0 0.0 0.0017236847208277133 8.618423604138567E-4 24 0.0 0.0 0.0 0.0034473694416554267 8.618423604138567E-4 25 0.0 0.0 0.0 0.0040937512119658195 8.618423604138567E-4 26 0.0 0.0 0.0 0.005709705637741801 8.618423604138567E-4 27 0.0 0.0 0.0 0.006679278293207389 8.618423604138567E-4 28 0.0 0.0 0.0 0.012065793045793994 8.618423604138567E-4 29 0.0 0.0 0.0 0.01809868956869099 8.618423604138567E-4 30 0.0 0.0 0.0 0.02984129172932979 8.618423604138567E-4 31 0.0 0.0 0.0 0.06108307729433209 8.618423604138567E-4 32 0.0 0.0 0.0 0.09609542318614502 8.618423604138567E-4 33 0.0 0.0 0.0 0.13369329615919953 8.618423604138567E-4 34 0.0 0.0 0.0 0.17215301149266787 9.695726554655887E-4 35 0.0 0.0 0.0 0.21933888072532653 9.695726554655887E-4 36 0.0 0.0 0.0 0.2890403816237972 9.695726554655887E-4 37 0.0 0.0 0.0 0.3901991286773736 9.695726554655887E-4 38 0.0 0.0 0.0 0.5268011428029699 0.001077302950517321 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGGC 75 2.0635416E-6 23.466494 36 TTAACGG 85 6.1113005E-6 20.70573 35 GATATAC 435 0.0 19.729305 1 CCGGTTT 195 0.0 19.179346 22 CGCAATA 235 0.0 18.723267 36 AGTCCGT 60 0.007411152 18.333199 6 GTAGAAC 675 0.0 18.251717 3 GTCCTAC 780 0.0 18.056013 1 AATGCCG 195 1.8189894E-12 18.05115 18 GTAGGAC 845 0.0 17.964365 3 GCATTCG 310 0.0 17.741806 22 GTATTAG 300 0.0 17.604612 1 CTATATA 100 2.4764233E-5 17.604612 1 CTGTAGG 780 0.0 17.491762 1 ATACACT 535 0.0 17.2709 4 GGACGTG 820 0.0 17.170607 6 TAGGACG 770 0.0 17.14273 4 ATACGAA 270 0.0 17.110987 40 TGTAGGA 880 0.0 17.00079 2 TGTAGAA 725 0.0 16.993895 2 >>END_MODULE