##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062707_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1302725 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.24284557370128 32.0 32.0 32.0 32.0 32.0 2 31.282004260300525 32.0 32.0 32.0 32.0 32.0 3 31.404965744880922 32.0 32.0 32.0 32.0 32.0 4 31.541382870521407 32.0 32.0 32.0 32.0 32.0 5 31.439164827572974 32.0 32.0 32.0 32.0 32.0 6 35.0310433898175 36.0 36.0 36.0 36.0 36.0 7 35.04652939031645 36.0 36.0 36.0 36.0 36.0 8 34.97677637260358 36.0 36.0 36.0 36.0 36.0 9 35.12975033103687 36.0 36.0 36.0 36.0 36.0 10 34.98332111535435 36.0 36.0 36.0 36.0 36.0 11 35.13598418699265 36.0 36.0 36.0 36.0 36.0 12 35.03275595386594 36.0 36.0 36.0 36.0 36.0 13 35.0838480876624 36.0 36.0 36.0 36.0 36.0 14 35.04434934464296 36.0 36.0 36.0 36.0 36.0 15 34.99650885643555 36.0 36.0 36.0 36.0 36.0 16 35.01370435049608 36.0 36.0 36.0 36.0 36.0 17 34.99186935078394 36.0 36.0 36.0 36.0 36.0 18 35.00307893070295 36.0 36.0 36.0 36.0 36.0 19 34.99105183365637 36.0 36.0 36.0 36.0 36.0 20 34.97412961292675 36.0 36.0 36.0 36.0 36.0 21 34.96358479341381 36.0 36.0 36.0 32.0 36.0 22 34.94494156479687 36.0 36.0 36.0 32.0 36.0 23 34.901826555873264 36.0 36.0 36.0 32.0 36.0 24 34.88323629315473 36.0 36.0 36.0 32.0 36.0 25 34.85390162927709 36.0 36.0 36.0 32.0 36.0 26 34.81132702604157 36.0 36.0 36.0 32.0 36.0 27 34.79410466522098 36.0 36.0 36.0 32.0 36.0 28 34.76825730679921 36.0 36.0 36.0 32.0 36.0 29 34.75070947437103 36.0 36.0 36.0 32.0 36.0 30 34.7283432804314 36.0 36.0 36.0 32.0 36.0 31 34.72285708802702 36.0 36.0 36.0 32.0 36.0 32 34.68438081713332 36.0 36.0 36.0 32.0 36.0 33 34.66325356464334 36.0 36.0 36.0 32.0 36.0 34 34.648712506476805 36.0 36.0 36.0 32.0 36.0 35 34.617282235314434 36.0 36.0 36.0 32.0 36.0 36 34.58226717073826 36.0 36.0 36.0 32.0 36.0 37 34.574909516590225 36.0 36.0 36.0 32.0 36.0 38 34.524824502485174 36.0 36.0 36.0 32.0 36.0 39 34.50131992554069 36.0 36.0 36.0 32.0 36.0 40 34.48612178318525 36.0 36.0 36.0 32.0 36.0 41 34.460228367460516 36.0 36.0 36.0 32.0 36.0 42 34.411583411694714 36.0 36.0 36.0 32.0 36.0 43 34.411975666391605 36.0 36.0 36.0 32.0 36.0 44 34.38760905026003 36.0 36.0 36.0 32.0 36.0 45 34.32490894087394 36.0 36.0 36.0 32.0 36.0 46 34.345927191080236 36.0 36.0 36.0 32.0 36.0 47 34.31619796964056 36.0 36.0 36.0 32.0 36.0 48 34.268475695177415 36.0 36.0 36.0 32.0 36.0 49 34.267063271219946 36.0 36.0 36.0 32.0 36.0 50 33.68662380778752 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 6.0 21 27.0 22 104.0 23 300.0 24 807.0 25 1914.0 26 4233.0 27 8096.0 28 13693.0 29 21668.0 30 32185.0 31 47212.0 32 71497.0 33 117369.0 34 251305.0 35 732308.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.22283657223402 17.63700615177448 11.380514083517651 26.75964319247385 2 16.37331863522541 20.75649708059343 36.30634807801256 26.563836206168602 3 18.93421129394281 24.12390728293811 28.662732322317375 28.27914910080171 4 12.864054753005819 15.700574872785698 35.69569279117664 35.73967758303185 5 14.47788289930722 36.53626053081042 33.5395421136464 15.446314456235966 6 34.47952137214022 35.26218907458525 16.482846711966616 13.775442841307905 7 29.768293385019863 30.367498896543783 21.00581473449884 18.858392983937517 8 28.036154982824463 32.999443474255884 19.71797578153486 19.24642576138479 9 27.550173674413248 13.901475752749045 18.1254677694832 40.42288280335451 10 15.580034159166361 26.90675315204667 32.158053311328175 25.355159377458786 11 37.89349248690245 20.843846552418967 21.908537872536414 19.354123088142163 12 24.125736437083805 23.565833157420023 29.285152276957916 23.02327812853826 13 30.205761000978722 19.34637010881038 25.00957608090733 25.438292809303576 14 23.499740927670842 19.289259053138615 24.987698862000805 32.22330115718974 15 25.43061659214339 26.98366884799171 22.268322170834214 25.317392389030687 16 25.886967702316298 25.497246157093784 23.97321000211096 24.642576138478958 17 24.258918804812986 25.472528737837997 25.501084265673875 24.767468191675142 18 25.017022011552708 24.87616342666334 26.32980867028728 23.777005891496668 19 25.70243144178549 25.106756990155247 25.09570323744459 24.09510833061467 20 25.54660423343376 24.45481586674087 25.37028152526435 24.628298374561016 21 26.445873073749254 24.49327371471339 24.028325241321077 25.03252797021628 22 25.5354737185515 24.923295400026866 24.807384520908098 24.73384636051354 23 24.563818150415475 24.402847876566426 25.107294325356467 25.926039647661632 24 24.657084188911703 25.219597382409948 25.011571897368977 25.11174653130937 25 25.222744631445625 24.373755013529333 25.142835210808112 25.260665144216933 26 24.33437601949759 25.063770174058224 25.64132875319043 24.960525053253757 27 25.3556199504884 24.948243105797463 25.080581089639026 24.61555585407511 28 24.548081905237098 24.78957569709647 25.44596902646376 25.21637337120267 29 24.483601681091557 24.935347060968354 25.391698171141265 25.18935308679883 30 24.803239363641598 25.072060488591223 25.44612255080696 24.67857759696022 31 24.88161354084707 24.829875837187434 24.841850735957323 25.446659886008177 32 24.77368592757489 25.144293692068548 24.95200445220595 25.130015928150605 33 24.51676293922355 24.598361127636302 25.390853787253644 25.494022145886508 34 24.796484292540637 24.950315684430713 25.762229173463318 24.490970849565336 35 25.561342570381317 24.811913489032605 25.207315434953653 24.419428505632425 36 24.460342743096202 25.32376364927364 25.236638584505556 24.979255023124605 37 25.322074881498395 24.883762881651922 25.021167168819208 24.772995068030472 38 24.698075188547083 24.836861194803202 25.079352894893397 25.385710721756315 39 25.030762440269434 24.609031069488957 25.073518969851655 25.28668752038995 40 25.552668444990307 24.67489301272333 25.082653668272275 24.689784874014087 41 24.267976741062007 24.844230363276978 25.90922873208083 24.978564163580188 42 25.57400832869562 25.160797558962944 25.279778924945788 23.98541518739565 43 24.658005334970927 24.240802932314956 25.578844345506536 25.522347387207585 44 24.396399854151873 24.772918305858873 25.628816519219328 25.201865320769922 45 24.46272237041586 25.04258381469612 25.46216584467175 25.03252797021628 46 24.303613044666406 24.42136630629358 25.628759430240024 25.646261218799992 47 24.584774223262777 24.397628048897506 26.044944251472874 24.972653476366848 48 24.68026636473546 25.39023968988083 25.011188086510966 24.918305858872746 49 24.1714866913585 24.840776065554895 25.916597900554606 25.071139342532 50 24.0545779040089 25.55896294306166 24.96605192960909 25.420407223320346 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 3.0 1 12.0 2 21.0 3 59.5 4 98.0 5 130.5 6 163.0 7 152.5 8 142.0 9 221.5 10 301.0 11 416.0 12 531.0 13 957.0 14 1383.0 15 1894.0 16 2405.0 17 2892.5 18 3380.0 19 3718.0 20 4056.0 21 4721.5 22 5387.0 23 6066.0 24 6745.0 25 7771.0 26 8797.0 27 11367.5 28 13938.0 29 16224.5 30 18511.0 31 20674.5 32 22838.0 33 26260.0 34 29682.0 35 34450.5 36 39219.0 37 44882.0 38 50545.0 39 53884.0 40 57223.0 41 61527.0 42 65831.0 43 68337.5 44 70844.0 45 78108.0 46 85372.0 47 90907.5 48 96443.0 49 97454.0 50 98465.0 51 94456.5 52 90448.0 53 88159.0 54 85870.0 55 86172.0 56 86474.0 57 84964.5 58 83455.0 59 76827.5 60 70200.0 61 61942.5 62 53685.0 63 47561.5 64 41438.0 65 35769.5 66 30101.0 67 27326.0 68 24551.0 69 22228.0 70 19905.0 71 15853.5 72 11802.0 73 10259.0 74 8716.0 75 6758.0 76 4800.0 77 4163.5 78 3527.0 79 2979.0 80 2431.0 81 1869.0 82 1307.0 83 1084.5 84 862.0 85 680.0 86 498.0 87 365.0 88 232.0 89 147.5 90 63.0 91 45.0 92 27.0 93 16.5 94 6.0 95 4.5 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.013356617858719224 2 0.004836016810915581 3 6.908595444165116E-4 4 1.5352434320366922E-4 5 0.0 6 7.676217160183461E-5 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 7.676217160183461E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1302725.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.079731535074224 #Duplication Level Percentage of deduplicated Percentage of total 1 80.95118494604272 49.444766439504306 2 12.188695562938605 14.889645054940809 3 3.1301656413210424 5.735690310966081 4 1.2552563697571244 3.066828882898281 5 0.6456238258291946 1.9717264977147364 6 0.40378774878931845 1.4797948375922136 7 0.24964190521792917 1.067364238543089 8 0.18548507007247803 0.9063502627033111 9 0.14157974658542688 0.7782887621017545 >10 0.7085176694424206 7.90026098928384 >50 0.0723731379582079 3.0690250230823364 >100 0.0632684443126154 7.596693538027928 >500 0.003662229150180158 1.5243949712356475 >1k 7.577025827958947E-4 0.5691701914055478 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1769 0.13579228156364542 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1454 0.11161219750906753 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.676217160183461E-5 2 0.0 0.0 0.0 0.0 7.676217160183461E-5 3 0.0 0.0 0.0 0.0 7.676217160183461E-5 4 0.0 0.0 0.0 0.0 7.676217160183461E-5 5 0.0 0.0 0.0 0.0 7.676217160183461E-5 6 0.0 0.0 0.0 0.0 7.676217160183461E-5 7 0.0 0.0 0.0 0.0 7.676217160183461E-5 8 0.0 0.0 0.0 0.0 7.676217160183461E-5 9 0.0 0.0 0.0 0.0 7.676217160183461E-5 10 0.0 0.0 0.0 0.0 7.676217160183461E-5 11 0.0 0.0 0.0 0.0 7.676217160183461E-5 12 0.0 0.0 0.0 0.0 7.676217160183461E-5 13 0.0 0.0 0.0 0.0 7.676217160183461E-5 14 0.0 0.0 0.0 0.0 7.676217160183461E-5 15 0.0 0.0 0.0 0.0 7.676217160183461E-5 16 0.0 0.0 0.0 0.0 7.676217160183461E-5 17 0.0 0.0 0.0 0.0 7.676217160183461E-5 18 0.0 0.0 0.0 0.0 1.5352434320366922E-4 19 0.0 0.0 0.0 7.676217160183461E-5 1.5352434320366922E-4 20 0.0 0.0 0.0 4.605730296110077E-4 1.5352434320366922E-4 21 0.0 0.0 0.0 6.140973728146769E-4 1.5352434320366922E-4 22 0.0 0.0 0.0 9.9790823082385E-4 1.5352434320366922E-4 23 0.0 0.0 0.0 0.0011514325740275193 1.5352434320366922E-4 24 0.0 0.0 0.0 0.0016887677752403616 1.5352434320366922E-4 25 0.0 0.0 0.0 0.0023028651480550386 1.5352434320366922E-4 26 0.0 0.0 0.0 0.003377535550480723 1.5352434320366922E-4 27 0.0 0.0 0.0 0.0049895411541192505 1.5352434320366922E-4 28 0.0 0.0 0.0 0.010669941852655011 1.5352434320366922E-4 29 0.0 0.0 0.0 0.024640657084188913 1.5352434320366922E-4 30 0.0 0.0 0.0 0.0476693085647393 1.5352434320366922E-4 31 0.0 0.0 0.0 0.0980252931355428 1.5352434320366922E-4 32 0.0 0.0 0.0 0.16288932813909304 1.5352434320366922E-4 33 0.0 0.0 0.0 0.22591107102419927 1.5352434320366922E-4 34 0.0 0.0 0.0 0.3017520965668119 1.5352434320366922E-4 35 0.0 0.0 0.0 0.3828897119499511 1.5352434320366922E-4 36 0.0 0.0 0.0 0.5057091865128864 1.5352434320366922E-4 37 0.0 0.0 0.0 0.6841812354871519 1.5352434320366922E-4 38 0.0 0.0 0.0 0.9062541979312595 1.5352434320366922E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGCA 50 0.002580636 21.999865 4 TAGGACG 325 0.0 19.630648 4 ATACGAA 395 0.0 18.379635 40 CGCATAG 60 0.007411024 18.333923 2 AGACCGT 120 3.1626405E-7 18.333221 6 TACGAAT 400 0.0 18.149889 41 CCTTATA 110 2.7959013E-6 18.000582 2 CGTCGTA 320 0.0 17.874891 10 ATACCGT 360 0.0 17.722113 6 GTCCTAT 385 0.0 17.718258 1 AGGACGT 350 0.0 17.599894 5 GTCGTAG 340 0.0 17.47048 11 CCGTCGT 330 0.0 17.333227 9 GATATAC 420 0.0 17.28959 1 TACCGTC 370 0.0 17.243137 7 GGACGTG 350 0.0 16.971325 6 CTAGGAC 235 0.0 16.850962 3 ACGTTTT 315 0.0 16.761803 29 ACCGTCC 105 3.7749047E-5 16.7618 8 CGCAATA 420 0.0 16.7618 36 >>END_MODULE