##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062706_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1688215 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.20766549284303 32.0 32.0 32.0 32.0 32.0 2 30.85201351723566 32.0 32.0 32.0 32.0 32.0 3 30.836619150996764 32.0 32.0 32.0 32.0 32.0 4 30.91572992776394 32.0 32.0 32.0 32.0 32.0 5 30.71709764455357 32.0 32.0 32.0 32.0 32.0 6 34.367435427359666 36.0 36.0 36.0 32.0 36.0 7 34.26503259359738 36.0 36.0 36.0 32.0 36.0 8 34.26031873902317 36.0 36.0 36.0 32.0 36.0 9 34.427932461209025 36.0 36.0 36.0 32.0 36.0 10 34.101198603258474 36.0 36.0 36.0 32.0 36.0 11 34.38699691686189 36.0 36.0 36.0 32.0 36.0 12 34.16194560526947 36.0 36.0 36.0 32.0 36.0 13 34.29537233113081 36.0 36.0 36.0 32.0 36.0 14 34.194510177909805 36.0 36.0 36.0 32.0 36.0 15 34.13979795227504 36.0 36.0 36.0 32.0 36.0 16 34.137568970776826 36.0 36.0 36.0 32.0 36.0 17 34.072450487645234 36.0 36.0 36.0 32.0 36.0 18 34.079825140755176 36.0 36.0 36.0 32.0 36.0 19 34.07723305384681 36.0 36.0 36.0 32.0 36.0 20 34.07266076891865 36.0 36.0 36.0 32.0 36.0 21 34.05110071880655 36.0 36.0 36.0 32.0 36.0 22 34.00825546509183 36.0 36.0 36.0 32.0 36.0 23 33.98398959848124 36.0 36.0 36.0 32.0 36.0 24 33.935536646694885 36.0 36.0 36.0 32.0 36.0 25 33.50304967080615 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 7.0 4 88.0 5 153.0 6 302.0 7 75.0 8 248.0 9 320.0 10 208.0 11 58.0 12 127.0 13 100.0 14 238.0 15 323.0 16 518.0 17 715.0 18 988.0 19 1360.0 20 2023.0 21 2958.0 22 4551.0 23 6781.0 24 9607.0 25 13972.0 26 19510.0 27 25422.0 28 34735.0 29 46130.0 30 59473.0 31 81224.0 32 116216.0 33 168179.0 34 378038.0 35 713568.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.97040088101291 17.78452978779745 10.923209346603818 26.321859984585828 2 17.200910583129804 20.05456864293377 36.509632739764086 26.23488803417234 3 19.11354485500709 23.416445661053114 28.66554865569152 28.80446082824828 4 12.901738980522445 15.340683897501279 35.83948036159989 35.918096760376386 5 14.813495807003655 36.211939491910286 33.658217466946674 15.31634723413938 6 34.16331237791812 35.42040023894862 16.67923043371072 13.737056949422541 7 30.021748447111086 30.49957410032027 20.935355126830377 18.54332232573827 8 27.871679807812594 32.86282517147521 19.781441369975582 19.48405365073662 9 27.19856795654538 14.270865635641233 18.925066156114795 39.605500251698594 10 16.015756586594804 26.532839269532047 31.763980945964537 25.68742319790861 11 37.28125502252761 21.254417600300805 22.35058147155092 19.113745905620664 12 24.421951089309758 23.971695147485363 28.66566227542069 22.94069148778419 13 29.202777743181525 19.510745695583402 25.296405884051936 25.990070677183137 14 23.07225589341412 20.08852501991309 25.02050618091582 31.818712905756975 15 24.939229815373682 27.554705026653487 22.162748455022946 25.34331670294988 16 25.562435249599268 25.969840175107024 23.87357282259265 24.59415175270106 17 23.997824542341355 26.031474151316488 25.31638437513715 24.654316931205006 18 24.766024483278738 24.886489474586394 26.336636482208725 24.010849559926143 19 25.331564986737398 25.243483769330417 25.40570742563217 24.019243818300016 20 25.350262411385376 24.74329707791919 25.106740850000563 24.799699660694873 21 26.369527849646428 24.45825667014246 24.5262303774854 24.64598510272571 22 25.53160690248025 24.865136803162322 24.866916588010064 24.736339706347366 23 24.20177947194802 24.55722303193594 25.676763470462653 25.56423402565339 24 24.573345639263827 25.3044650123257 25.31674326238442 24.80544608602605 25 24.538121166826816 24.91476565002313 25.39408282619785 25.153030356952204 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 178.0 1 178.0 2 461.5 3 745.0 4 745.0 5 745.0 6 1848.5 7 2952.0 8 2952.0 9 2952.0 10 3447.5 11 3943.0 12 3943.0 13 3943.0 14 4921.0 15 5899.0 16 5899.0 17 5899.0 18 9437.0 19 12975.0 20 12975.0 21 12975.0 22 20349.5 23 27724.0 24 27724.0 25 27724.0 26 40422.0 27 53120.0 28 53120.0 29 53120.0 30 64932.0 31 76744.0 32 76744.0 33 76744.0 34 94157.5 35 111571.0 36 111571.0 37 111571.0 38 124507.5 39 137444.0 40 137444.0 41 137444.0 42 154790.5 43 172137.0 44 172137.0 45 172137.0 46 192667.5 47 213198.0 48 213198.0 49 213198.0 50 216238.5 51 219279.0 52 219279.0 53 219279.0 54 205363.5 55 191448.0 56 191448.0 57 191448.0 58 175669.0 59 159890.0 60 159890.0 61 159890.0 62 141425.5 63 122961.0 64 122961.0 65 122961.0 66 102271.5 67 81582.0 68 81582.0 69 81582.0 70 62350.5 71 43119.0 72 43119.0 73 43119.0 74 33892.5 75 24666.0 76 24666.0 77 24666.0 78 20015.5 79 15365.0 80 15365.0 81 15365.0 82 10844.5 83 6324.0 84 6324.0 85 6324.0 86 4687.0 87 3050.0 88 3050.0 89 3050.0 90 2020.0 91 990.0 92 990.0 93 990.0 94 602.0 95 214.0 96 214.0 97 214.0 98 455.5 99 697.0 100 697.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009358997521050341 2 0.003909454660691914 3 0.005804947829512236 4 0.016111691934972736 5 0.037850629214880804 6 0.048749714935597654 7 0.0709625255077108 8 0.09050979881117038 9 0.0991579863939131 10 0.12220007522738513 11 0.1221408410658595 12 0.1353500590860761 13 0.12427327088078237 14 0.12664263734180778 15 0.11515121000583456 16 0.11444040006752694 17 0.12634646653417958 18 0.13315839510962763 19 0.13452078082471722 20 0.1256948907573976 21 0.13440231250166595 22 0.15507503487411262 23 0.14417594915339577 24 0.1366532106396401 25 0.13475771747081977 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1688215.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.02077484508212 #Duplication Level Percentage of deduplicated Percentage of total 1 82.9052502329675 47.273216070092325 2 10.740853926104528 12.249036267286453 3 2.7477196191470403 4.7003130522239465 4 1.1540964631312507 2.6322989829485066 5 0.6014873287441149 1.7148636772244037 6 0.37316623531324894 1.276693673015022 7 0.2615575916062593 1.0439951578001716 8 0.17647969285497322 0.8050407064810141 9 0.13177881093606766 0.6762716916964343 >10 0.7263129453210094 7.68779659019621 >50 0.08215536041067978 3.2957290263323227 >100 0.0856938251435003 10.427373094860211 >500 0.01084177290908681 4.105008664509832 >1k 0.002606195410838176 2.1123633453332182 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2423 0.14352437337661375 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1988 0.11775751311296251 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1741 0.10312667521613064 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.923416152563507E-5 2 0.0 0.0 0.0 0.0 5.923416152563507E-5 3 0.0 0.0 0.0 0.0 5.923416152563507E-5 4 0.0 0.0 0.0 0.0 5.923416152563507E-5 5 0.0 0.0 0.0 0.0 5.923416152563507E-5 6 0.0 0.0 0.0 0.0 1.1846832305127013E-4 7 0.0 0.0 0.0 0.0 1.1846832305127013E-4 8 0.0 0.0 0.0 0.0 1.1846832305127013E-4 9 0.0 0.0 0.0 5.923416152563507E-5 1.1846832305127013E-4 10 0.0 0.0 0.0 5.923416152563507E-5 1.1846832305127013E-4 11 0.0 0.0 0.0 5.923416152563507E-5 1.1846832305127013E-4 12 0.0 0.0 0.0 5.923416152563507E-5 2.3693664610254027E-4 13 0.0 0.0 0.0 5.923416152563507E-5 2.9617080762817533E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGGTAT 310 0.0 12.872716 9 TACCGTG 95 1.0393469E-6 12.000563 7 GTATAGG 95 1.0479453E-6 11.992379 1 CGCATCG 295 0.0 11.916873 13 CCGTCGT 295 0.0 11.916873 9 ACACCGT 105 2.720626E-7 11.761758 6 ATACCGT 315 0.0 11.761758 6 TACCGTC 275 0.0 11.746004 7 CGGTCCA 355 0.0 11.508946 10 ACCGTCG 300 0.0 11.400872 8 TGCACCG 75 2.076541E-4 11.398505 5 TAAGGGT 100 1.936205E-6 11.396814 4 CGCAAGA 375 0.0 11.393098 2 GACGGTA 335 0.0 11.3441515 8 GCGTTAT 160 4.5474735E-11 11.274086 1 AAGACGG 390 0.0 11.203659 5 CAAGACG 390 0.0 11.201998 4 CGTCGTA 290 0.0 11.139774 10 AGAACCG 145 1.2205419E-9 11.136471 5 CCTATTC 325 0.0 11.101625 3 >>END_MODULE