##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062706_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1688215 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.31210361239534 32.0 32.0 32.0 32.0 32.0 2 31.41401065622566 32.0 32.0 32.0 32.0 32.0 3 31.485835038783566 32.0 32.0 32.0 32.0 32.0 4 31.581588245572988 32.0 32.0 32.0 32.0 32.0 5 31.521148668860306 32.0 32.0 32.0 32.0 32.0 6 35.101229405022465 36.0 36.0 36.0 36.0 36.0 7 35.1137870472659 36.0 36.0 36.0 36.0 36.0 8 35.05880115980488 36.0 36.0 36.0 36.0 36.0 9 35.18554331053805 36.0 36.0 36.0 36.0 36.0 10 35.06057403825935 36.0 36.0 36.0 36.0 36.0 11 35.19411686307728 36.0 36.0 36.0 36.0 36.0 12 35.09983207115207 36.0 36.0 36.0 36.0 36.0 13 35.155721279576355 36.0 36.0 36.0 36.0 36.0 14 35.116611332087444 36.0 36.0 36.0 36.0 36.0 15 35.07037906901668 36.0 36.0 36.0 36.0 36.0 16 35.08359302576982 36.0 36.0 36.0 36.0 36.0 17 35.05804177785412 36.0 36.0 36.0 36.0 36.0 18 35.074906335982085 36.0 36.0 36.0 36.0 36.0 19 35.05655322337498 36.0 36.0 36.0 36.0 36.0 20 35.054724072467074 36.0 36.0 36.0 36.0 36.0 21 35.05191341150268 36.0 36.0 36.0 36.0 36.0 22 35.033752809920536 36.0 36.0 36.0 36.0 36.0 23 35.00015104711189 36.0 36.0 36.0 36.0 36.0 24 34.970171453280535 36.0 36.0 36.0 36.0 36.0 25 34.94959113620007 36.0 36.0 36.0 32.0 36.0 26 34.90323448139011 36.0 36.0 36.0 32.0 36.0 27 34.88981261273001 36.0 36.0 36.0 32.0 36.0 28 34.87030147226508 36.0 36.0 36.0 32.0 36.0 29 34.845445633405696 36.0 36.0 36.0 32.0 36.0 30 34.84087394081915 36.0 36.0 36.0 32.0 36.0 31 34.84097760060182 36.0 36.0 36.0 32.0 36.0 32 34.80770458738964 36.0 36.0 36.0 32.0 36.0 33 34.79488216844418 36.0 36.0 36.0 32.0 36.0 34 34.780963917510505 36.0 36.0 36.0 32.0 36.0 35 34.760670293771824 36.0 36.0 36.0 32.0 36.0 36 34.726189496006135 36.0 36.0 36.0 32.0 36.0 37 34.728563008858465 36.0 36.0 36.0 32.0 36.0 38 34.70501091389426 36.0 36.0 36.0 32.0 36.0 39 34.7093142757291 36.0 36.0 36.0 32.0 36.0 40 34.695006264012584 36.0 36.0 36.0 32.0 36.0 41 34.66622260790243 36.0 36.0 36.0 32.0 36.0 42 34.64681749658663 36.0 36.0 36.0 32.0 36.0 43 34.632872590280265 36.0 36.0 36.0 32.0 36.0 44 34.60527420974224 36.0 36.0 36.0 32.0 36.0 45 34.57832148156485 36.0 36.0 36.0 32.0 36.0 46 34.58177542552341 36.0 36.0 36.0 32.0 36.0 47 34.56553104906662 36.0 36.0 36.0 32.0 36.0 48 34.529956788679165 36.0 36.0 36.0 32.0 36.0 49 34.52065761766126 36.0 36.0 36.0 32.0 36.0 50 33.99124637560974 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 14.0 21 34.0 22 117.0 23 376.0 24 1058.0 25 2580.0 26 5142.0 27 9592.0 28 16314.0 29 25500.0 30 36990.0 31 53513.0 32 78954.0 33 131356.0 34 290368.0 35 1036305.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.31754099205604 18.380709369773612 11.49756301878789 26.80418661938246 2 16.527667449185167 20.54516837772245 36.25459751833232 26.672566654760065 3 18.47360773556261 23.785054285533196 28.944682600374485 28.796655378529717 4 12.60682153259097 15.842432204940964 36.058838547031684 35.49190771543638 5 14.458229550146159 36.51501734080079 33.63351231922474 15.393240789828312 6 34.374577953849176 35.561815989062936 16.479465751769336 13.58414030531855 7 30.003364502367592 30.52338151442886 20.93318738027288 18.540066602930672 8 27.89504174233835 33.033786001063845 19.58614251510768 19.48502974149012 9 27.24664808688467 14.040628711390433 18.92709163228617 39.78563156943873 10 15.911362000693039 26.64583598653015 31.821657786478617 25.621144226298192 11 37.58324620975409 21.0726121969062 22.28797872308918 19.05616287025053 12 24.381965567181904 23.897370891740685 28.62644864546281 23.0942148956146 13 29.303317409216245 19.438223212090875 25.310875688226915 25.947583690465965 14 23.1291038167532 19.925424190639227 24.99865242282529 31.946819569782285 15 25.02536702967335 27.561181484585788 22.052345228540204 25.361106257200657 16 25.717814377908027 25.87448873514333 23.789742420248604 24.617954466700034 17 24.04332386573985 26.083170686198144 25.155622950868224 24.717882497193784 18 24.854772644479525 24.8967696650012 26.241740536602272 24.006717153917005 19 25.501195049208782 25.167173612365723 25.36317945285405 23.968451885571447 20 25.527850421895316 24.676122413318208 24.94083988117627 24.855187283610203 21 26.51889717838072 24.487165438051434 24.46643348151746 24.52750390205039 22 25.594370385288606 24.851218594787987 24.856786605971397 24.697624413952017 23 24.31982893174151 24.438771128084987 25.68357703254621 25.557822907627287 24 24.702600083520167 25.192644301821748 25.31537748450286 24.789378130155225 25 24.776346614619584 24.750935159325085 25.416194027419493 25.056524198635838 26 24.31811114105727 25.526073397049547 25.79363410466084 24.362181357232345 27 25.169424510503696 25.100712883133962 24.889957736425753 24.83990486993659 28 24.348439031758396 24.958669363795487 25.738013226988272 24.95487837745785 29 24.535026640564144 25.053858661367183 25.44190165352162 24.96921304454705 30 24.39126533054143 25.206919734749423 25.76875575682007 24.633059177889074 31 24.93082930787844 24.95784008553413 24.8477830134195 25.263547593167935 32 24.529458629380738 25.02436004892742 24.957129275595822 25.489052046096024 33 24.228015981376778 24.706154133211705 25.664918271665638 25.40091161374588 34 24.920344861288402 24.81940985004872 25.81560997858685 24.444635310076027 35 25.44788430383571 24.738199814597074 25.461982034278808 24.35193384728841 36 24.26385264909979 25.146145485024125 25.446403449797568 25.14359841607852 37 25.19122268194513 24.834810732045383 25.01440870979111 24.959557876218373 38 24.30620507459062 24.685185240031633 25.76449089719023 25.244118788187524 39 24.894400298540173 24.568375473503078 25.123399566998277 25.41382466095847 40 25.08187641976881 24.656101266722544 25.914116389203983 24.347905924304662 41 24.17387595774235 24.790266642578107 26.283085981347163 24.75277141833238 42 25.16462654342012 24.98822721039678 25.682036944346542 24.165109301836555 43 24.17974013973339 24.225646614915757 26.108285970685014 25.486327274665843 44 23.91804361411313 24.57637208530904 25.86323424445346 25.642350056124368 45 23.920472214735682 24.846065222735255 26.120488207959298 25.11297435456977 46 23.798077492637184 24.43940689913352 26.18646236373157 25.576053244497725 47 24.000260630310713 24.33522981373818 26.537378236776714 25.127131319174396 48 24.48923863370483 25.044558898007658 25.753532577307986 24.712669890979523 49 23.591485681622302 24.999600169409703 26.006284744537872 25.402629404430122 50 23.286635039535888 25.431684272067567 25.99405406782201 25.28762662057454 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 33.0 1 35.5 2 38.0 3 116.5 4 195.0 5 220.5 6 246.0 7 229.0 8 212.0 9 318.5 10 425.0 11 613.5 12 802.0 13 1283.5 14 1765.0 15 2295.5 16 2826.0 17 3319.5 18 3813.0 19 4290.0 20 4767.0 21 5833.5 22 6900.0 23 7726.0 24 8552.0 25 11020.0 26 13488.0 27 16678.5 28 19869.0 29 22547.0 30 25225.0 31 27544.5 32 29864.0 33 34443.5 34 39023.0 35 45034.5 36 51046.0 37 60002.5 38 68959.0 39 73290.0 40 77621.0 41 84273.5 42 90926.0 43 91818.0 44 92710.0 45 100868.5 46 109027.0 47 114831.5 48 120636.0 49 123554.5 50 126473.0 51 121611.5 52 116750.0 53 114764.0 54 112778.0 55 113799.0 56 114820.0 57 111638.0 58 108456.0 59 99023.5 60 89591.0 61 79124.5 62 68658.0 63 60228.0 64 51798.0 65 44575.0 66 37352.0 67 32957.0 68 28562.0 69 26070.5 70 23579.0 71 18502.5 72 13426.0 73 11978.0 74 10530.0 75 7851.5 76 5173.0 77 4672.5 78 4172.0 79 3586.5 80 3001.0 81 2362.5 82 1724.0 83 1448.5 84 1173.0 85 979.0 86 785.0 87 554.5 88 324.0 89 194.0 90 64.0 91 48.0 92 32.0 93 20.5 94 9.0 95 9.0 96 9.0 97 7.5 98 6.0 99 4.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015756286965818926 2 0.004501796275948265 3 7.108099383076207E-4 4 1.1846832305127012E-4 5 0.0 6 6.515757767819857E-4 7 5.923416152563506E-5 8 5.923416152563506E-5 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.7770248457690517E-4 47 0.0 48 0.0 49 0.0 50 1.1846832305127012E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1688215.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.66478031476761 #Duplication Level Percentage of deduplicated Percentage of total 1 83.79842069430585 50.8361278214454 2 10.409954685976704 12.630352282229246 3 2.5580835636446326 4.655567322459584 4 1.0246632642433082 2.4864388728773186 5 0.5390615810807181 1.635102619619653 6 0.3502034040120317 1.2747007541924225 7 0.2324989989112195 0.9873150484646768 8 0.16638976851712192 0.807519900297299 9 0.12198544797000622 0.6660198362429047 >10 0.6503258701430814 7.277283210934003 >50 0.06873125092317657 2.957373496204254 >100 0.06996695818904675 9.0702592844874 >500 0.007653858004913964 3.066890581456144 >1k 0.002060654078246067 1.6490489690896373 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1877 0.11118252118361702 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1819 0.10774693981513019 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1846832305127013E-4 2 0.0 0.0 0.0 0.0 1.1846832305127013E-4 3 0.0 0.0 0.0 0.0 1.1846832305127013E-4 4 0.0 0.0 0.0 0.0 1.1846832305127013E-4 5 0.0 0.0 0.0 0.0 1.1846832305127013E-4 6 0.0 0.0 0.0 0.0 1.1846832305127013E-4 7 0.0 0.0 0.0 0.0 1.1846832305127013E-4 8 0.0 0.0 0.0 0.0 1.1846832305127013E-4 9 0.0 0.0 0.0 0.0 1.1846832305127013E-4 10 0.0 0.0 0.0 0.0 1.1846832305127013E-4 11 0.0 0.0 0.0 0.0 1.1846832305127013E-4 12 0.0 0.0 0.0 0.0 3.554049691538104E-4 13 0.0 0.0 0.0 0.0 4.1463913067944547E-4 14 0.0 0.0 0.0 0.0 4.1463913067944547E-4 15 0.0 0.0 0.0 0.0 4.7387329220508053E-4 16 0.0 0.0 0.0 0.0 4.7387329220508053E-4 17 0.0 0.0 0.0 0.0 4.7387329220508053E-4 18 0.0 0.0 0.0 0.0 4.7387329220508053E-4 19 0.0 0.0 0.0 0.0 4.7387329220508053E-4 20 0.0 0.0 0.0 5.923416152563507E-5 5.923416152563507E-4 21 0.0 0.0 0.0 5.923416152563507E-5 5.923416152563507E-4 22 0.0 0.0 0.0 5.331074537307155E-4 5.923416152563507E-4 23 0.0 0.0 0.0 8.88512422884526E-4 5.923416152563507E-4 24 0.0 0.0 0.0 0.0015400881996665116 6.515757767819857E-4 25 0.0 0.0 0.0 0.0017177906842434168 6.515757767819857E-4 26 0.0 0.0 0.0 0.0030801763993330233 7.108099383076208E-4 27 0.0 0.0 0.0 0.005804947829512236 7.700440998332558E-4 28 0.0 0.0 0.0 0.017000204357857263 7.700440998332558E-4 29 0.0 0.0 0.0 0.03909454660691914 7.700440998332558E-4 30 0.0 0.0 0.0 0.08381633855877361 7.700440998332558E-4 31 0.0 0.0 0.0 0.17865023116131534 7.700440998332558E-4 32 0.0 0.0 0.0 0.28503478526135595 7.700440998332558E-4 33 0.0 0.0 0.0 0.39704658470633186 7.700440998332558E-4 34 0.0 0.0 0.0 0.5257031835400112 7.700440998332558E-4 35 0.0 0.0 0.0 0.6630672041179589 7.700440998332558E-4 36 0.0 0.0 0.0 0.856999848952888 7.700440998332558E-4 37 0.0 0.0 0.0 1.1410276534683081 7.700440998332558E-4 38 0.0 0.0 0.0 1.5301960946917306 7.700440998332558E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2350 0.0 21.350212 1 ACCGTCG 405 0.0 18.469 8 ATACCGT 490 0.0 17.959051 6 CGCCGGT 590 0.0 16.779537 7 CCGTCGT 435 0.0 16.689531 9 TAGGACG 425 0.0 16.564583 4 CTACAGT 745 0.0 16.53679 4 CGCAATA 600 0.0 16.499878 36 ATACGAA 590 0.0 16.406658 40 CGTCGTA 460 0.0 16.26075 10 GCCGGTC 655 0.0 16.122019 8 TCTAGCG 575 0.0 16.069447 28 CGGTCCA 610 0.0 15.868735 10 GTCCTAC 680 0.0 15.85705 1 AACGCAG 3165 0.0 15.709204 6 TACCGTC 505 0.0 15.683053 7 GGCGTTA 435 0.0 15.678044 42 CTAGCGG 590 0.0 15.660901 29 GTCGTAG 465 0.0 15.612788 11 GATATAC 170 4.4788976E-8 15.533437 1 >>END_MODULE