##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062705_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1603223 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.205436798249526 32.0 32.0 32.0 32.0 32.0 2 31.343723237503454 32.0 32.0 32.0 32.0 32.0 3 31.464945924553227 32.0 32.0 32.0 32.0 32.0 4 31.576518675193658 32.0 32.0 32.0 32.0 32.0 5 31.511820252079715 32.0 32.0 32.0 32.0 32.0 6 35.087029065825526 36.0 36.0 36.0 36.0 36.0 7 35.09767886314006 36.0 36.0 36.0 36.0 36.0 8 35.03827664648025 36.0 36.0 36.0 36.0 36.0 9 35.160470502232066 36.0 36.0 36.0 36.0 36.0 10 35.04966058994912 36.0 36.0 36.0 36.0 36.0 11 35.18019077820116 36.0 36.0 36.0 36.0 36.0 12 35.0919323138453 36.0 36.0 36.0 36.0 36.0 13 35.13375307115729 36.0 36.0 36.0 36.0 36.0 14 35.09448467243796 36.0 36.0 36.0 36.0 36.0 15 35.055891164236044 36.0 36.0 36.0 36.0 36.0 16 35.07337469584705 36.0 36.0 36.0 36.0 36.0 17 35.04228482251065 36.0 36.0 36.0 36.0 36.0 18 35.058863925979104 36.0 36.0 36.0 36.0 36.0 19 35.03845441339102 36.0 36.0 36.0 36.0 36.0 20 35.022622554691395 36.0 36.0 36.0 36.0 36.0 21 35.01118621676461 36.0 36.0 36.0 36.0 36.0 22 34.99256684815525 36.0 36.0 36.0 36.0 36.0 23 34.94756562249918 36.0 36.0 36.0 32.0 36.0 24 34.93393370728838 36.0 36.0 36.0 32.0 36.0 25 34.89530027949948 36.0 36.0 36.0 32.0 36.0 26 34.851838452916404 36.0 36.0 36.0 32.0 36.0 27 34.82551897022435 36.0 36.0 36.0 32.0 36.0 28 34.80567519303303 36.0 36.0 36.0 32.0 36.0 29 34.7712595191062 36.0 36.0 36.0 32.0 36.0 30 34.75940776797738 36.0 36.0 36.0 32.0 36.0 31 34.74542094268857 36.0 36.0 36.0 32.0 36.0 32 34.7084398115546 36.0 36.0 36.0 32.0 36.0 33 34.68376576433846 36.0 36.0 36.0 32.0 36.0 34 34.65944725094388 36.0 36.0 36.0 32.0 36.0 35 34.62799810132464 36.0 36.0 36.0 32.0 36.0 36 34.58876525598747 36.0 36.0 36.0 32.0 36.0 37 34.56363649972587 36.0 36.0 36.0 32.0 36.0 38 34.51698048244069 36.0 36.0 36.0 32.0 36.0 39 34.47052343934686 36.0 36.0 36.0 32.0 36.0 40 34.45747909055696 36.0 36.0 36.0 32.0 36.0 41 34.427661030312066 36.0 36.0 36.0 32.0 36.0 42 34.36769307825549 36.0 36.0 36.0 32.0 36.0 43 34.3630399513979 36.0 36.0 36.0 32.0 36.0 44 34.322960686068 36.0 36.0 36.0 32.0 36.0 45 34.25410251724183 36.0 36.0 36.0 32.0 36.0 46 34.24995649388762 36.0 36.0 36.0 32.0 36.0 47 34.196102476074756 36.0 36.0 36.0 32.0 36.0 48 34.15236869730536 36.0 36.0 36.0 32.0 36.0 49 34.12764412686195 36.0 36.0 36.0 32.0 36.0 50 33.62208501250294 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 5.0 20 14.0 21 68.0 22 182.0 23 548.0 24 1341.0 25 3117.0 26 6229.0 27 11297.0 28 18844.0 29 28183.0 30 40525.0 31 56838.0 32 82821.0 33 131407.0 34 280997.0 35 940806.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.0151619598505 18.08567779961933 12.36363500251722 25.53552523801295 2 15.19691959727215 20.183736316927682 39.242137593900075 25.377206491900097 3 19.213193980099998 24.30751689104899 28.424803644674206 28.054485484176805 4 11.918741185724008 16.021975732633575 36.596717986206535 35.462565095435885 5 13.678508853727772 37.50258073892403 33.73117775880211 15.087732648546085 6 33.99302900299024 35.876994587123114 16.818029283676413 13.311947126210224 7 29.75069594186211 30.5332445954181 20.65863576058976 19.057423702130023 8 27.22478407557776 34.71469658307048 19.289955296300015 18.77056404505175 9 27.057995051218704 14.541894670922261 18.755032830741573 39.64507744711746 10 15.834353673818303 27.262083939664038 31.779359452802264 25.124202933715395 11 37.28233689262193 21.246015058416702 22.436180119671437 19.035467929289936 12 24.637932464791238 23.714916764542423 29.48042786312322 22.166722907543118 13 29.90239037239361 19.806227829815313 25.534813310437787 24.756568487353288 14 22.953637765925265 20.542307589150106 25.39621749438475 31.10783715053988 15 24.670866124051365 28.313653184865732 22.885899216765228 24.12958147431767 16 24.779148003739966 26.21244829945678 25.297291767895047 23.711111928908206 17 23.1035857145263 26.541098774156808 26.204901002543004 24.15041450877389 18 24.161018149065974 25.09301575638573 27.977517787606587 22.768448306941703 19 25.032138386238223 25.410438847247075 25.875751533005705 23.681671233509 20 25.185267426926885 24.785510187915218 26.409426511470958 23.61979587368694 21 26.004679324086545 24.74147389352573 24.962341483374427 24.2915052990133 22 24.83104346681653 25.414181308526633 25.83739130489021 23.917383919766618 23 23.40560233978679 25.086154577373204 26.353414340986873 25.15482874185313 24 24.056915351139548 25.764101438165493 26.1657922821716 24.013190928523358 25 24.44507096018458 25.220758434728047 26.105351532506702 24.22881907258067 26 23.07002831171958 26.38690936943894 26.96830072921858 23.574761589622902 27 24.387686553897993 25.51366840420827 26.21188693026485 23.886758111628886 28 23.424751266667208 25.690063079184867 26.306384077573735 24.57880157657419 29 23.482759416500386 25.317750556223306 26.53323960546973 24.666250421806573 30 23.655099758424125 25.638666610945577 26.857399126634284 23.848834503996013 31 24.377020539251244 25.24159146918426 25.767906273799714 24.613481717764778 32 23.7097396931057 25.765348925258678 25.840759520041818 24.684151861593804 33 23.281290250950743 25.349998097582183 26.68050545682042 24.688206194646657 34 23.957054009329955 25.883610701692778 26.701338491276633 23.45799679770063 35 24.68920418432121 25.598559900899627 26.513342186333404 23.198893728445764 36 23.268129262117622 26.26315864979482 26.305074216125888 24.16363787196167 37 24.577554089481 25.818429501073776 25.71488807233928 23.88912833710594 38 23.841224832727576 25.816495896079335 25.84281787374557 24.499461397447515 39 24.587658734935815 25.12651078483779 25.944862317968244 24.34096816225815 40 25.24196571531222 25.488157293152607 25.900264654386817 23.369612337148357 41 23.66925873693179 25.549034663300112 27.207256881918486 23.574449717849607 42 25.166866992302385 26.391712194747708 25.95895892212125 22.482461890828663 43 23.91152073042864 25.29329980919685 26.341251341828304 24.4539281185462 44 23.41608123136956 25.96307562952877 26.145770114325956 24.475073024775718 45 23.675683295461706 26.173152456021402 25.94143172846198 24.209732520054914 46 23.554097379024714 25.318671174261798 26.136525242948565 24.990706203764923 47 24.369426068255052 25.315957490603296 26.386052586603725 23.928563854537924 48 24.477755122026068 26.071482257926686 25.236726269520833 24.214036350526406 49 23.891810434356294 25.983846289630325 25.94143172846198 24.1829115475514 50 23.62915202688584 26.896694970069667 24.997707742466268 24.476445260578224 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 32.0 1 32.0 2 32.0 3 147.0 4 262.0 5 296.5 6 331.0 7 297.0 8 263.0 9 392.0 10 521.0 11 807.5 12 1094.0 13 1908.0 14 2722.0 15 3836.5 16 4951.0 17 5491.0 18 6031.0 19 6305.5 20 6580.0 21 7372.0 22 8164.0 23 8961.5 24 9759.0 25 11411.5 26 13064.0 27 17081.5 28 21099.0 29 24441.5 30 27784.0 31 31610.0 32 35436.0 33 41247.5 34 47059.0 35 54383.0 36 61707.0 37 67807.5 38 73908.0 39 75768.5 40 77629.0 41 81296.5 42 84964.0 43 86307.5 44 87651.0 45 96053.0 46 104455.0 47 112732.0 48 121009.0 49 122235.0 50 123461.0 51 114272.0 52 105083.0 53 102450.0 54 99817.0 55 100803.5 56 101790.0 57 97773.0 58 93756.0 59 85565.5 60 77375.0 61 68158.0 62 58941.0 63 50679.5 64 42418.0 65 36434.0 66 30450.0 67 26731.0 68 23012.0 69 21594.5 70 20177.0 71 15315.5 72 10454.0 73 9446.5 74 8439.0 75 6017.0 76 3595.0 77 3207.5 78 2820.0 79 2407.0 80 1994.0 81 1617.5 82 1241.0 83 1076.5 84 912.0 85 740.0 86 568.0 87 418.0 88 268.0 89 174.0 90 80.0 91 54.0 92 28.0 93 20.5 94 13.0 95 13.0 96 13.0 97 9.5 98 6.0 99 5.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01646682963006394 2 0.003492963860922654 3 4.3662048261533174E-4 4 0.0 5 0.0 6 5.613691919339979E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.871230639779993E-4 47 6.237435465933311E-5 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1603223.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.2611103252883 #Duplication Level Percentage of deduplicated Percentage of total 1 75.19292501817539 40.0485867507417 2 14.830454261218371 15.797729211617872 3 4.782407800476286 7.641490484450604 4 2.003009279154499 4.267299927984959 5 0.9813510739267528 2.6133923908126464 6 0.5366929570598392 1.7150917678061588 7 0.348297650705053 1.2985503720168385 8 0.2306707868043578 0.9828625779846365 9 0.1555442998666669 0.7456015904101444 >10 0.7713726305737691 7.344974113775224 >50 0.0767276375605297 2.8989378385416185 >100 0.07747701402505545 8.731196515453817 >500 0.010008244941832297 3.6510805714011183 >1k 0.003061345511619291 2.2632058870026617 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1879 0.1172014124048869 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1877 0.11707666369556824 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1732 0.10803238226996494 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1698 0.1059116542115476 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1632 0.10179494680403163 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1617 0.10085933148414163 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 6.237435465933311E-5 0.0 8 0.0 0.0 0.0 1.2474870931866621E-4 0.0 9 0.0 0.0 0.0 1.2474870931866621E-4 0.0 10 0.0 0.0 0.0 1.871230639779993E-4 0.0 11 0.0 0.0 0.0 1.871230639779993E-4 0.0 12 0.0 0.0 0.0 2.4949741863733243E-4 1.871230639779993E-4 13 0.0 6.237435465933311E-5 0.0 3.1187177329666555E-4 3.742461279559986E-4 14 0.0 6.237435465933311E-5 0.0 3.742461279559986E-4 3.742461279559986E-4 15 0.0 1.871230639779993E-4 0.0 4.989948372746649E-4 4.3662048261533174E-4 16 0.0 1.871230639779993E-4 0.0 5.613691919339979E-4 4.3662048261533174E-4 17 0.0 1.871230639779993E-4 0.0 5.613691919339979E-4 4.3662048261533174E-4 18 0.0 1.871230639779993E-4 0.0 6.237435465933311E-4 4.3662048261533174E-4 19 0.0 1.871230639779993E-4 0.0 6.237435465933311E-4 4.3662048261533174E-4 20 0.0 1.871230639779993E-4 0.0 8.732409652306635E-4 4.989948372746649E-4 21 0.0 1.871230639779993E-4 0.0 0.0010603640292086629 4.989948372746649E-4 22 0.0 1.871230639779993E-4 0.0 0.0016217332211426608 4.989948372746649E-4 23 0.0 1.871230639779993E-4 0.0 0.002557348541032657 4.989948372746649E-4 24 0.0 1.871230639779993E-4 0.0 0.0050523227274059815 4.989948372746649E-4 25 0.0 2.4949741863733243E-4 0.0 0.0060503124019553114 4.989948372746649E-4 26 0.0 2.4949741863733243E-4 0.0 0.007796794332416639 4.989948372746649E-4 27 0.0 2.4949741863733243E-4 0.0 0.009418527553559299 4.989948372746649E-4 28 0.0 2.4949741863733243E-4 0.0 0.013098614478459952 4.989948372746649E-4 29 0.0 2.4949741863733243E-4 0.0 0.018837055107118597 4.989948372746649E-4 30 0.0 2.4949741863733243E-4 0.0 0.03287128490546855 4.989948372746649E-4 31 0.0 2.4949741863733243E-4 0.0 0.05956750869966312 4.989948372746649E-4 32 0.0 2.4949741863733243E-4 0.0 0.09150317828524167 4.989948372746649E-4 33 0.0 2.4949741863733243E-4 0.0 0.12106862239376556 4.989948372746649E-4 34 0.0 2.4949741863733243E-4 0.0 0.1552497687470801 5.613691919339979E-4 35 0.0 2.4949741863733243E-4 0.0 0.19616734540360262 5.613691919339979E-4 36 0.0 2.4949741863733243E-4 0.0 0.25099440314915644 5.613691919339979E-4 37 0.0 3.1187177329666555E-4 0.0 0.32640499793229016 5.613691919339979E-4 38 0.0 3.1187177329666555E-4 0.0 0.4278880729630251 5.613691919339979E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCCTAC 1185 0.0 20.796389 1 TTAGGAC 635 0.0 20.787298 3 GGCGCGA 55 0.004484369 19.9999 39 GACGGTA 400 0.0 19.799902 8 TAGGACG 1005 0.0 19.48249 4 CGCAATA 465 0.0 19.397755 36 CGACGGT 425 0.0 19.152845 7 ACGACGG 425 0.0 19.152845 6 TCCTACA 1310 0.0 19.146137 2 TAGCGGC 485 0.0 19.051453 30 TGTAGGA 1170 0.0 18.992544 2 GACCGTT 70 8.125176E-4 18.857048 7 CGTCGTA 365 0.0 18.68484 10 TAGGACC 1225 0.0 18.67746 4 CTAGCGG 495 0.0 18.666576 29 GTAGGAC 1205 0.0 18.622314 3 TACGACG 440 0.0 18.499907 5 ATACGAA 490 0.0 18.408072 40 TAGTACG 60 0.007413343 18.333242 4 GTCCTAA 625 0.0 18.306763 1 >>END_MODULE