SRR4062703_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062703_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1010714
Sequences flagged as poor quality	0
Sequence length	25
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTAAAGTGTGTATTTCTCATTT	3709	0.36696830161648103	No Hit
GTCCTACAGTGGACATTTCTAAATT	3546	0.35084108857698615	No Hit
CTGTAGGACGTGGAATATGGCAAGA	3147	0.3113640456152779	No Hit
CTTTAGGACGTGAAATATGGCGAGG	2958	0.2926643936860477	No Hit
GTCCTACAGTGTGCATTTCTCATTT	2592	0.2564523693151574	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1873	0.18531454001824452	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1569	0.15523679299980014	No Hit
CTGAAGGACCTGGAATATGGCGAGA	1478	0.14623325688572633	No Hit
GTCCTTCAGTGTGCATTTCTCATTT	1378	0.1363392611559749	No Hit
ATTTAGAAATGTCCACTGTAGGACG	1349	0.13347000239434698	No Hit
GAATATGGCAAGAAAACTGAAAATC	1166	0.11536399020890183	No Hit
TTTCTAAATTTTCCACCTTTTTCAG	1149	0.11368201093484409	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGCGAA	55	5.8831574E-7	17.278723	18
GGCGAAA	35	0.0021644675	16.291365	19
TTACCGC	35	0.0021644675	16.291365	16
ATTACCG	35	0.0021680542	16.287329	15
CCAACGT	40	0.0052652685	14.254946	19
CGCCACC	40	0.0052756686	14.250707	14
AAGACGG	40	0.005280875	14.248588	5
CTTCGAA	50	0.0014983523	13.300659	13
CAAGACG	50	0.0015005923	13.298022	4
TCCAACG	115	3.7471182E-10	13.221978	18
GACAGTC	60	4.0915245E-4	12.666039	7
CCACCTT	425	0.0	12.294726	13
ACCTCCG	55	0.003059202	12.095105	19
TCGAACC	55	0.0030648867	12.092108	15
TTCGAAC	55	0.0030660247	12.091508	14
TCTTCGA	55	0.003067163	12.090909	12
CGTCTTC	55	0.0030683018	12.09031	10
TCGTCTT	55	0.0030683018	12.09031	9
AGGACGA	55	0.0030694408	12.08971	5
CCAACGA	80	2.8538718E-5	11.879122	19