##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062702_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 471854 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.18796280205318 32.0 32.0 32.0 32.0 32.0 2 31.37404790464847 32.0 32.0 32.0 32.0 32.0 3 31.473354045954892 32.0 32.0 32.0 32.0 32.0 4 31.571729814730826 32.0 32.0 32.0 32.0 32.0 5 31.510715178847693 32.0 32.0 32.0 32.0 32.0 6 35.06800408600966 36.0 36.0 36.0 36.0 36.0 7 35.0918737575606 36.0 36.0 36.0 36.0 36.0 8 35.031357157086724 36.0 36.0 36.0 36.0 36.0 9 35.13499090820466 36.0 36.0 36.0 36.0 36.0 10 35.03090362696936 36.0 36.0 36.0 36.0 36.0 11 35.16151394287216 36.0 36.0 36.0 36.0 36.0 12 35.06639553760273 36.0 36.0 36.0 36.0 36.0 13 35.11163622645988 36.0 36.0 36.0 36.0 36.0 14 35.070104311927 36.0 36.0 36.0 36.0 36.0 15 35.032206996231885 36.0 36.0 36.0 36.0 36.0 16 35.047709672907295 36.0 36.0 36.0 36.0 36.0 17 35.00830341588712 36.0 36.0 36.0 36.0 36.0 18 35.032902126505235 36.0 36.0 36.0 36.0 36.0 19 35.000008477198456 36.0 36.0 36.0 36.0 36.0 20 34.980184548610374 36.0 36.0 36.0 36.0 36.0 21 34.967619221199776 36.0 36.0 36.0 36.0 36.0 22 34.966364595828374 36.0 36.0 36.0 36.0 36.0 23 34.92441941787078 36.0 36.0 36.0 32.0 36.0 24 34.91578962984313 36.0 36.0 36.0 32.0 36.0 25 34.88187447812247 36.0 36.0 36.0 32.0 36.0 26 34.84421876258334 36.0 36.0 36.0 32.0 36.0 27 34.8307145854438 36.0 36.0 36.0 32.0 36.0 28 34.81072323218623 36.0 36.0 36.0 32.0 36.0 29 34.777359098365174 36.0 36.0 36.0 32.0 36.0 30 34.757882734913764 36.0 36.0 36.0 32.0 36.0 31 34.76532147655843 36.0 36.0 36.0 32.0 36.0 32 34.719870977039506 36.0 36.0 36.0 32.0 36.0 33 34.68126581527337 36.0 36.0 36.0 32.0 36.0 34 34.64970096682448 36.0 36.0 36.0 32.0 36.0 35 34.604097877733366 36.0 36.0 36.0 32.0 36.0 36 34.57335531753466 36.0 36.0 36.0 32.0 36.0 37 34.57232533792232 36.0 36.0 36.0 32.0 36.0 38 34.52456480182429 36.0 36.0 36.0 32.0 36.0 39 34.507847766470135 36.0 36.0 36.0 32.0 36.0 40 34.47872858977565 36.0 36.0 36.0 32.0 36.0 41 34.44310104396699 36.0 36.0 36.0 32.0 36.0 42 34.38591174388688 36.0 36.0 36.0 32.0 36.0 43 34.380901719599706 36.0 36.0 36.0 32.0 36.0 44 34.335171472531755 36.0 36.0 36.0 32.0 36.0 45 34.25431383436402 36.0 36.0 36.0 32.0 36.0 46 34.263888830019454 36.0 36.0 36.0 32.0 36.0 47 34.218211565441855 36.0 36.0 36.0 32.0 36.0 48 34.16428810606671 36.0 36.0 36.0 32.0 36.0 49 34.125587575817946 36.0 36.0 36.0 32.0 36.0 50 33.58955100518381 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 6.0 21 15.0 22 52.0 23 122.0 24 367.0 25 899.0 26 1787.0 27 3308.0 28 5606.0 29 8524.0 30 12170.0 31 16889.0 32 24546.0 33 39098.0 34 82293.0 35 276169.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.89811058403598 17.94563636903172 11.296859169199596 25.8593938777327 2 16.56818528628834 21.172366435510945 35.559902677224095 26.69954560097662 3 18.947002562238662 24.846297469762828 28.313902846861204 27.892797121137303 4 12.412128353533834 15.505464625635526 35.48817110413624 36.594235916694394 5 14.39089209797946 36.952955787171454 32.85105138453844 15.805100730310647 6 34.23517169614985 35.03415273041702 16.665006538080878 14.065669035352263 7 30.008434812463175 30.538471645890464 20.950548262810106 18.502545278836248 8 28.873761799200597 31.46079083784391 19.86059247140005 19.80485489155544 9 27.790587766554907 13.76124818270058 18.714687170183996 39.73347688056052 10 16.264988746519048 26.278467492063225 31.091184985186093 26.36535877623163 11 37.91278658229029 21.18494280010342 21.71031717438021 19.19195344322608 12 24.81381952892208 23.840849076197298 28.293285634963354 23.052045759917263 13 29.62441772243109 19.026860003306105 25.879615304734095 25.46910696952871 14 23.95253616584791 19.448388696503578 25.129171311464987 31.469903826183522 15 25.59944389578132 26.219550962797815 23.03890610231131 25.142099039109556 16 26.017793639558 25.491571545435665 23.71199565967439 24.77863915533195 17 23.812450461371526 25.340677412928574 25.608133024198164 25.238739101501732 18 25.01027860312724 24.04536148893514 26.770145002479577 24.174214905458044 19 25.4926311952426 24.815726898574557 25.750761888211184 23.94088001797166 20 25.52569226921887 23.797403434113093 25.72172748350125 24.955176813166783 21 27.05688624023533 23.87285050036664 24.591504999427787 24.478758259970245 22 25.82451351477364 23.90887859380232 25.25293840891462 25.01366948250942 23 24.526654431243564 23.541180110796983 25.951247631682683 25.980917826276773 24 24.605704306840675 25.014729132316354 25.350426191152348 25.029140369690623 25 25.14824500798976 24.063375535652977 25.58100598914071 25.207373467216556 26 24.35795818198002 24.861291840272624 26.293938379244423 24.48681159850293 27 25.146337638337286 24.654024338036766 25.52696384898719 24.672674174638765 28 24.397165224836495 24.114238726385704 26.38973072179106 25.098865326986736 29 24.19074544244618 24.55653655579904 26.304111017390973 24.948606984363806 30 24.313452890088882 24.9424610154836 26.273805032912723 24.47028106151479 31 24.371521699508747 24.723961225294264 25.381579895476143 25.522937179720845 32 24.288233224683907 24.902194322820197 25.396838852695964 25.412733599799935 33 24.104278018200546 24.317479559355224 25.877496005120225 25.700746417324005 34 24.87867009710631 24.54085373865645 26.128633009363067 24.45184315487418 35 25.820910705430066 24.386992586689953 25.7738622540023 24.01823445387768 36 24.421961030318702 25.20419451779576 25.242765770768077 25.131078681117465 37 25.409342720417754 24.933771887066765 25.40722342080389 24.24966197171159 38 24.533012330085153 24.652328898345672 25.62169654172689 25.19296222984228 39 24.96598524119749 24.606340096724836 25.24361349061362 25.184061171464055 40 25.45745082165246 24.80279917092999 25.476524518177236 24.263225489240316 41 23.83957749642898 25.176431692854145 26.26193695507509 24.722053855641786 42 25.453636082347508 25.522937179720845 25.382215685360304 23.641211052571347 43 24.62223484382881 24.198162991094705 25.677222191610117 25.502379973466372 44 24.203249310167976 24.849847622357764 25.57146914087832 25.375433926595935 45 24.25432443086209 25.095050587681783 25.672135872536845 24.978489108919284 46 24.09606381648522 24.826164080762442 25.584451089640204 25.493321013112137 47 24.513514773637606 24.542973038270315 26.118884231139294 24.824627956952785 48 25.076824611002557 25.658148495085342 24.737312812861607 24.527714081050494 49 23.86522102175673 25.545189825666416 25.377129366287026 25.212459786289827 50 23.835762757124026 25.79166437075875 24.90071081309049 25.471862059026734 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 33.0 1 33.5 2 34.0 3 105.0 4 176.0 5 195.5 6 215.0 7 178.0 8 141.0 9 201.0 10 261.0 11 374.5 12 488.0 13 821.0 14 1154.0 15 1547.0 16 1940.0 17 2201.0 18 2462.0 19 2576.0 20 2690.0 21 2948.0 22 3206.0 23 3272.0 24 3338.0 25 3490.5 26 3643.0 27 4375.5 28 5108.0 29 5650.5 30 6193.0 31 6417.0 32 6641.0 33 7540.5 34 8440.0 35 9619.5 36 10799.0 37 13444.5 38 16090.0 39 17391.0 40 18692.0 41 20813.0 42 22934.0 43 23475.5 44 24017.0 45 27056.5 46 30096.0 47 32603.5 48 35111.0 49 35726.0 50 36341.0 51 34537.0 52 32733.0 53 32331.5 54 31930.0 55 32810.0 56 33690.0 57 33231.5 58 32773.0 59 29927.0 60 27081.0 61 23943.0 62 20805.0 63 18288.0 64 15771.0 65 13521.0 66 11271.0 67 9744.5 68 8218.0 69 7366.0 70 6514.0 71 5025.5 72 3537.0 73 3254.5 74 2972.0 75 2118.0 76 1264.0 77 1177.5 78 1091.0 79 936.0 80 781.0 81 613.0 82 445.0 83 404.0 84 363.0 85 298.5 86 234.0 87 168.5 88 103.0 89 62.0 90 21.0 91 14.0 92 7.0 93 5.0 94 3.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014411237374272549 2 0.004662459150499942 3 2.11929961386361E-4 4 2.11929961386361E-4 5 0.0 6 6.357898841590831E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.11929961386361E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 471854.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.85621467342747 #Duplication Level Percentage of deduplicated Percentage of total 1 81.60736212227681 47.214930618785814 2 11.238930136044237 13.004839093012578 3 3.0425061237116315 5.280836623160336 4 1.2914193428030947 2.9886653892252992 5 0.6889970702809642 1.9931381203769034 6 0.40129203578231204 1.3930342901374912 7 0.2797198624334103 1.1328472686558293 8 0.20185644674817674 0.9342919933022236 9 0.14544849580306415 0.7573589457398276 >10 0.8837835292317452 9.85767698183103 >50 0.12333235640526867 5.0097903916129 >100 0.09240722817876308 9.483882529292424 >500 0.002945250300518345 0.9487077548673432 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 645 0.13669482509420286 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 613 0.12991306632983932 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 561 0.11889270833774855 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 546 0.11571375891695312 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 543 0.11507796903279405 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 535 0.11338252934170315 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 506 0.10723656046149868 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 505 0.10702463050011232 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 479 0.10151445150406693 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.357898841590831E-4 2 0.0 0.0 0.0 0.0 6.357898841590831E-4 3 0.0 0.0 0.0 0.0 6.357898841590831E-4 4 0.0 0.0 0.0 0.0 6.357898841590831E-4 5 0.0 0.0 0.0 0.0 6.357898841590831E-4 6 0.0 0.0 0.0 0.0 8.477198455454441E-4 7 0.0 0.0 0.0 0.0 8.477198455454441E-4 8 2.1192996138636103E-4 0.0 0.0 0.0 8.477198455454441E-4 9 2.1192996138636103E-4 0.0 0.0 0.0 8.477198455454441E-4 10 2.1192996138636103E-4 0.0 0.0 0.0 8.477198455454441E-4 11 2.1192996138636103E-4 0.0 0.0 0.0 8.477198455454441E-4 12 2.1192996138636103E-4 0.0 0.0 0.0 0.0010596498069318052 13 2.1192996138636103E-4 0.0 0.0 0.0 0.0010596498069318052 14 2.1192996138636103E-4 0.0 0.0 2.1192996138636103E-4 0.0010596498069318052 15 2.1192996138636103E-4 0.0 0.0 2.1192996138636103E-4 0.0010596498069318052 16 2.1192996138636103E-4 0.0 0.0 2.1192996138636103E-4 0.0010596498069318052 17 2.1192996138636103E-4 0.0 0.0 4.2385992277272207E-4 0.0010596498069318052 18 2.1192996138636103E-4 0.0 0.0 4.2385992277272207E-4 0.0010596498069318052 19 2.1192996138636103E-4 0.0 0.0 4.2385992277272207E-4 0.0010596498069318052 20 2.1192996138636103E-4 0.0 0.0 8.477198455454441E-4 0.0010596498069318052 21 2.1192996138636103E-4 0.0 0.0 0.0010596498069318052 0.0010596498069318052 22 2.1192996138636103E-4 0.0 0.0 0.0019073696524772492 0.0010596498069318052 23 2.1192996138636103E-4 0.0 0.0 0.004238599227727221 0.0012715797683181661 24 2.1192996138636103E-4 0.0 0.0 0.009324918300999886 0.0012715797683181661 25 2.1192996138636103E-4 0.0 0.0 0.011656147876249858 0.0012715797683181661 26 4.2385992277272207E-4 0.0 0.0 0.014623167335658912 0.0012715797683181661 27 4.2385992277272207E-4 0.0 0.0 0.019285626486158853 0.0012715797683181661 28 4.2385992277272207E-4 0.0 0.0 0.029882124555476907 0.0012715797683181661 29 4.2385992277272207E-4 0.0 0.0 0.056161439767385676 0.0012715797683181661 30 4.2385992277272207E-4 0.0 0.0 0.09282532308722613 0.0012715797683181661 31 8.477198455454441E-4 0.0 0.0 0.15852361111699806 0.0012715797683181661 32 8.477198455454441E-4 0.0 0.0 0.23269909760222443 0.0012715797683181661 33 8.477198455454441E-4 0.0 0.0 0.31747108215676884 0.0012715797683181661 34 8.477198455454441E-4 0.0 0.0 0.4117799149736995 0.0014835097297045273 35 8.477198455454441E-4 0.0 0.0 0.5185926155124254 0.0014835097297045273 36 8.477198455454441E-4 0.0 0.0 0.6665197285601054 0.0014835097297045273 37 8.477198455454441E-4 0.0 0.0 0.8898939078613299 0.0014835097297045273 38 8.477198455454441E-4 0.0 0.0 1.1480246008299178 0.0014835097297045273 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGCGG 35 3.2150044E-4 31.42842 5 ACCGCGC 50 0.0025782008 21.999893 8 GACGGAC 230 0.0 21.043375 7 GTGCTAC 75 5.454867E-5 20.537588 1 GCATATA 65 4.919161E-4 20.311897 1 TAACGGC 65 4.926199E-4 20.307592 36 ATTCGTG 55 0.004479757 19.999903 44 TATAACA 55 0.004479757 19.999903 4 GTATTAG 115 2.0105108E-7 19.134398 1 GGCGTTA 115 2.0150037E-7 19.130342 42 AAGACGG 255 0.0 18.980299 5 ATACACT 165 8.185452E-11 18.666578 4 ATCGTTT 155 7.166818E-10 18.451525 29 CATCGTT 155 7.166818E-10 18.451525 28 CATATAG 60 0.00740578 18.333244 2 GCCCTAG 85 1.4285452E-4 18.11756 7 GCGGGGT 110 2.7892293E-6 17.999912 44 AGACGGA 270 0.0 17.925838 6 CAAGACG 270 0.0 17.925838 4 GTTCAAA 210 0.0 17.813213 1 >>END_MODULE