##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062701_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1937837 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.164814171676976 32.0 32.0 32.0 32.0 32.0 2 31.3796702199411 32.0 32.0 32.0 32.0 32.0 3 31.468150313984097 32.0 32.0 32.0 32.0 32.0 4 31.584314366997845 32.0 32.0 32.0 32.0 32.0 5 31.51304469880594 32.0 32.0 32.0 32.0 32.0 6 35.08031738479552 36.0 36.0 36.0 36.0 36.0 7 35.09245308041904 36.0 36.0 36.0 36.0 36.0 8 35.04669845812625 36.0 36.0 36.0 36.0 36.0 9 35.147690956463315 36.0 36.0 36.0 36.0 36.0 10 35.04471119087932 36.0 36.0 36.0 36.0 36.0 11 35.16845224856373 36.0 36.0 36.0 36.0 36.0 12 35.07694042378177 36.0 36.0 36.0 36.0 36.0 13 35.11411640917167 36.0 36.0 36.0 36.0 36.0 14 35.07244159338479 36.0 36.0 36.0 36.0 36.0 15 35.04191270989252 36.0 36.0 36.0 36.0 36.0 16 35.05231348147445 36.0 36.0 36.0 36.0 36.0 17 35.02851736239942 36.0 36.0 36.0 36.0 36.0 18 35.0374902533082 36.0 36.0 36.0 36.0 36.0 19 35.00920356046458 36.0 36.0 36.0 36.0 36.0 20 34.98989801515814 36.0 36.0 36.0 36.0 36.0 21 34.97062446428673 36.0 36.0 36.0 36.0 36.0 22 34.96778831243288 36.0 36.0 36.0 36.0 36.0 23 34.92350491811231 36.0 36.0 36.0 32.0 36.0 24 34.90496362697172 36.0 36.0 36.0 32.0 36.0 25 34.87760993313679 36.0 36.0 36.0 32.0 36.0 26 34.83205140576839 36.0 36.0 36.0 32.0 36.0 27 34.814650561424926 36.0 36.0 36.0 32.0 36.0 28 34.7898584865497 36.0 36.0 36.0 32.0 36.0 29 34.7628918221708 36.0 36.0 36.0 32.0 36.0 30 34.745957477331686 36.0 36.0 36.0 32.0 36.0 31 34.73579047154121 36.0 36.0 36.0 32.0 36.0 32 34.69107463630842 36.0 36.0 36.0 32.0 36.0 33 34.65224526108233 36.0 36.0 36.0 32.0 36.0 34 34.6306268277466 36.0 36.0 36.0 32.0 36.0 35 34.584279276327166 36.0 36.0 36.0 32.0 36.0 36 34.553372136046534 36.0 36.0 36.0 32.0 36.0 37 34.53887814093755 36.0 36.0 36.0 32.0 36.0 38 34.493893449242634 36.0 36.0 36.0 32.0 36.0 39 34.45790899853806 36.0 36.0 36.0 32.0 36.0 40 34.422224366652095 36.0 36.0 36.0 32.0 36.0 41 34.385071603029566 36.0 36.0 36.0 32.0 36.0 42 34.31934987308014 36.0 36.0 36.0 32.0 36.0 43 34.313343175922434 36.0 36.0 36.0 32.0 36.0 44 34.27060583526891 36.0 36.0 36.0 32.0 36.0 45 34.17911310394012 36.0 36.0 36.0 32.0 36.0 46 34.17674241951207 36.0 36.0 36.0 32.0 36.0 47 34.094229803641895 36.0 36.0 36.0 32.0 36.0 48 34.04205978108582 36.0 36.0 36.0 32.0 36.0 49 34.02342663495433 36.0 36.0 36.0 32.0 36.0 50 33.49604430093966 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 8.0 20 27.0 21 83.0 22 255.0 23 673.0 24 1875.0 25 4121.0 26 8465.0 27 15277.0 28 25046.0 29 36562.0 30 50574.0 31 70507.0 32 101320.0 33 155297.0 34 327333.0 35 1140413.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.31959232189373 18.543294508567442 12.958959158383266 25.178154011155563 2 15.494095256181867 20.681156219229997 37.8183308184072 26.00641770618094 3 18.349841523439153 24.952137085579405 28.728895163962086 27.969126227019352 4 12.35410894540448 16.394653202830174 35.907634971641 35.34360288012435 5 14.193608647166919 36.88106894439522 32.980637690373335 15.944684718064522 6 33.38894545281906 35.5960052161519 17.020559626839756 13.99448970418928 7 29.665136954243316 31.230800113735057 20.65065327991983 18.4534096521018 8 28.22678068382428 32.475899675772524 19.53363466586715 19.76368497453604 9 27.559490297687578 14.85651269946853 19.041126782077132 38.54287022076676 10 16.313807611269677 26.695588947883646 31.032021785114022 25.958581655732655 11 36.36533929324293 21.92150320176568 22.231952429435502 19.48120507555589 12 25.060054070595207 24.182322868228855 28.243242336687764 22.514380724488177 13 29.433744943460155 19.803936037963975 25.48764421362581 25.274674804950052 14 24.029420431130173 19.94538240316394 25.58713658579127 30.438060579914616 15 25.24980171190869 26.778103627910916 23.51740626275585 24.45468839742455 16 25.31379058197361 26.24431260214352 24.2455376793817 24.19635913650116 17 23.553890239478346 25.991504961459604 25.72393859751878 24.730666201543265 18 24.60815847772542 24.667090162898116 27.18820003952861 23.536551319847852 19 24.86788104469055 25.515819958025364 26.608739537948757 23.00755945933533 20 25.463183952004222 23.751326865985117 26.64935182886899 24.136137353141674 21 26.5809250210415 24.28460185247779 25.381546538743972 23.752926587736738 22 25.23493978079684 24.394208594427706 25.854032098674967 24.51681952610049 23 23.6853254427488 24.323924045211236 26.449438213843578 25.541312298196388 24 23.8912767172884 25.456681857142783 26.223980654719668 24.428060770849147 25 24.509956203746754 24.42568699018545 26.157979231483345 24.906377574584447 26 23.880594704301757 25.198197784436978 26.807930697989562 24.113276813271707 27 24.951634218977137 24.98130647727337 25.958323636095297 24.108735667654194 28 24.026995046539 24.523476432744342 26.802047850257786 24.64748067045887 29 23.760305949365193 25.135602220413787 26.962897292187115 24.1411945380339 30 24.129016011150576 24.973307868515256 26.93601164597435 23.961664474359814 31 24.201932360668106 25.022641223178216 25.79386191924295 24.981564496910728 32 23.896591921817986 25.162333054844137 25.952027956943745 24.98904706639413 33 23.71855837204058 24.695988362282275 26.347520457086947 25.237932808590198 34 24.274126255201033 24.984918752196393 26.677785592905906 24.063169399696672 35 25.264147603745823 24.773187837779957 26.214175908500042 23.748488649974174 36 24.0031024281196 25.49739735591797 26.010701622479083 24.488798593483352 37 25.08879745819695 25.232617604060607 25.82064435760077 23.857940580141673 38 24.101046682460908 25.01443619871021 26.100440852352392 24.78407626647649 39 24.394363406210122 25.036987115015354 25.90145610802147 24.66719337075306 40 24.619098510349428 25.314513036958218 26.09280347108658 23.973584981605782 41 23.436130076987897 25.60942948245905 26.690170535499114 24.264269905053933 42 25.1946887173689 25.596218877026296 25.96446450346443 23.244627902140376 43 24.27985429115039 24.50288646568313 26.121340442978436 25.095918800188045 44 23.90371326380908 25.139678930684056 26.167680769848033 24.78892703565883 45 24.137685470965824 25.29923827442659 25.959097695007372 24.603978559600215 46 23.701037498032598 25.156372962610334 26.286758160524503 24.855831378832562 47 23.964166195780344 25.076644812380827 26.4916775680076 24.467511423831233 48 24.570229591033716 26.08707543513722 25.181013676588897 24.16168129724017 49 23.621646196248705 25.67197344255477 26.043934551770864 24.662445809425666 50 23.547606711816684 26.43608643868728 25.222722665901554 24.793584183594483 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 85.0 1 90.0 2 95.0 3 280.0 4 465.0 5 513.5 6 562.0 7 545.5 8 529.0 9 756.0 10 983.0 11 1480.0 12 1977.0 13 3563.0 14 5149.0 15 7138.5 16 9128.0 17 10225.0 18 11322.0 19 11790.0 20 12258.0 21 12925.0 22 13592.0 23 14402.5 24 15213.0 25 15256.5 26 15300.0 27 17929.5 28 20559.0 29 23786.0 30 27013.0 31 30459.5 32 33906.0 33 38633.5 34 43361.0 35 49033.5 36 54706.0 37 63080.5 38 71455.0 39 77900.5 40 84346.0 41 92531.0 42 100716.0 43 104876.0 44 109036.0 45 121127.5 46 133219.0 47 142665.0 48 152111.0 49 152669.5 50 153228.0 51 143574.5 52 133921.0 53 129461.0 54 125001.0 55 126098.0 56 127195.0 57 122701.0 58 118207.0 59 107991.5 60 97776.0 61 85774.5 62 73773.0 63 64589.5 64 55406.0 65 47625.0 66 39844.0 67 34817.5 68 29791.0 69 27462.0 70 25133.0 71 19677.0 72 14221.0 73 12728.5 74 11236.0 75 8084.5 76 4933.0 77 4538.0 78 4143.0 79 3531.0 80 2919.0 81 2303.5 82 1688.0 83 1401.0 84 1114.0 85 914.5 86 715.0 87 525.0 88 335.0 89 212.5 90 90.0 91 60.0 92 30.0 93 26.0 94 22.0 95 16.5 96 11.0 97 12.5 98 14.0 99 9.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01692608821072154 2 0.003767086705434977 3 5.676432021888322E-4 4 2.0641570988684808E-4 5 0.0 6 5.160392747171202E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.0320785494342404E-4 47 1.0320785494342404E-4 48 0.0 49 0.0 50 5.160392747171202E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1937837.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.07707892351748 #Duplication Level Percentage of deduplicated Percentage of total 1 75.86179132157864 39.50660493933264 2 14.174720907729393 14.763561188613139 3 4.615300436985907 7.210540953379795 4 1.9076126465290097 3.973715773951652 5 0.9713533854441606 2.5292623458200723 6 0.5561443605247177 1.7377424253548928 7 0.36394188876206957 1.326712132524542 8 0.2607015202594285 1.0861258916824998 9 0.186038902567276 0.871952635065655 >10 0.9325450713143995 8.64932074381057 >50 0.07582178067146408 2.7399118186984643 >100 0.08046829863737226 9.186584956609053 >500 0.009671098989914367 3.4926315247850295 >1k 0.00388838000625423 2.925332670372 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2519 0.12999029330124257 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2493 0.12864859118697805 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2153 0.11110325584659597 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2132 0.11001957336969001 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.1603927471712014E-5 0.0 0.0 0.0 5.1603927471712014E-5 2 5.1603927471712014E-5 0.0 0.0 0.0 5.1603927471712014E-5 3 5.1603927471712014E-5 0.0 0.0 0.0 5.1603927471712014E-5 4 5.1603927471712014E-5 0.0 0.0 0.0 5.1603927471712014E-5 5 5.1603927471712014E-5 0.0 0.0 0.0 5.1603927471712014E-5 6 5.1603927471712014E-5 0.0 0.0 0.0 5.1603927471712014E-5 7 5.1603927471712014E-5 0.0 0.0 0.0 5.1603927471712014E-5 8 5.1603927471712014E-5 0.0 0.0 0.0 5.1603927471712014E-5 9 5.1603927471712014E-5 0.0 0.0 0.0 5.1603927471712014E-5 10 5.1603927471712014E-5 0.0 0.0 0.0 5.1603927471712014E-5 11 5.1603927471712014E-5 0.0 0.0 0.0 5.1603927471712014E-5 12 5.1603927471712014E-5 0.0 0.0 1.0320785494342403E-4 5.1603927471712014E-5 13 5.1603927471712014E-5 0.0 0.0 1.0320785494342403E-4 1.0320785494342403E-4 14 5.1603927471712014E-5 0.0 0.0 1.0320785494342403E-4 1.0320785494342403E-4 15 5.1603927471712014E-5 5.1603927471712014E-5 0.0 2.0641570988684806E-4 2.580196373585601E-4 16 5.1603927471712014E-5 5.1603927471712014E-5 0.0 3.612274923019841E-4 3.096235648302721E-4 17 5.1603927471712014E-5 5.1603927471712014E-5 0.0 4.128314197736961E-4 3.096235648302721E-4 18 5.1603927471712014E-5 5.1603927471712014E-5 0.0 5.676432021888321E-4 3.096235648302721E-4 19 5.1603927471712014E-5 5.1603927471712014E-5 0.0 8.772667670191043E-4 3.096235648302721E-4 20 5.1603927471712014E-5 5.1603927471712014E-5 0.0 0.0011868903318493764 3.096235648302721E-4 21 5.1603927471712014E-5 5.1603927471712014E-5 0.0 0.0013933060417362245 3.096235648302721E-4 22 5.1603927471712014E-5 5.1603927471712014E-5 0.0 0.002683404228529025 3.096235648302721E-4 23 5.1603927471712014E-5 5.1603927471712014E-5 0.0 0.005573224166944898 3.096235648302721E-4 24 5.1603927471712014E-5 5.1603927471712014E-5 0.0 0.009701538364681858 3.096235648302721E-4 25 5.1603927471712014E-5 5.1603927471712014E-5 0.0 0.011714091536078627 3.096235648302721E-4 26 5.1603927471712014E-5 5.1603927471712014E-5 0.0 0.015377970386570182 3.096235648302721E-4 27 5.1603927471712014E-5 5.1603927471712014E-5 0.0 0.019093453164533446 3.096235648302721E-4 28 5.1603927471712014E-5 5.1603927471712014E-5 0.0 0.02864017974680017 3.612274923019841E-4 29 5.1603927471712014E-5 5.1603927471712014E-5 0.0 0.042882863728992686 3.612274923019841E-4 30 5.1603927471712014E-5 5.1603927471712014E-5 0.0 0.0742580516317936 3.612274923019841E-4 31 5.1603927471712014E-5 5.1603927471712014E-5 0.0 0.14794846006139836 5.676432021888321E-4 32 5.1603927471712014E-5 5.1603927471712014E-5 0.0 0.22695407302058945 5.676432021888321E-4 33 5.1603927471712014E-5 5.1603927471712014E-5 0.0 0.2963613554700421 5.676432021888321E-4 34 5.1603927471712014E-5 5.1603927471712014E-5 0.0 0.3744897016622141 5.676432021888321E-4 35 5.1603927471712014E-5 1.0320785494342403E-4 0.0 0.4654158218673707 5.676432021888321E-4 36 5.1603927471712014E-5 1.0320785494342403E-4 0.0 0.5939612051994053 5.676432021888321E-4 37 5.1603927471712014E-5 1.0320785494342403E-4 0.0 0.7783420380558324 5.676432021888321E-4 38 5.1603927471712014E-5 1.0320785494342403E-4 0.0 1.0100436724038193 6.192471296605442E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTAG 545 0.0 18.572031 1 TAGGACG 145 6.3118932E-9 18.207237 4 ATACCGT 605 0.0 18.18216 6 AATACCG 85 1.4311905E-4 18.117987 5 CTAGCGG 600 0.0 17.599876 29 GTCGTAG 530 0.0 17.43384 11 GGTTGCG 90 2.2163584E-4 17.11099 7 CGCAATA 620 0.0 17.032139 36 CGTCGTA 545 0.0 16.95401 10 ACCGTCG 560 0.0 16.892736 8 CCGTCGT 565 0.0 16.743244 9 CGGTCCA 660 0.0 16.66655 10 CGAATGC 665 0.0 16.541237 43 TACCGTC 575 0.0 16.452059 7 TCTAGCG 645 0.0 16.371979 28 GTGTACG 110 5.615706E-5 16.002777 1 TAGCGGC 660 0.0 15.9998865 30 TATTAGC 455 0.0 15.956343 2 CAATACG 680 0.0 15.85283 38 CGCCGGT 700 0.0 15.714176 7 >>END_MODULE