SRR4062700_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062700_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	664996
Sequences flagged as poor quality	0
Sequence length	25
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGAAGCAGTGGTATCAACG	2088	0.3139868510487281	No Hit
TCCATGTACTCTGCGTTGATACCAC	1731	0.2603023176079255	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1555	0.23383599299845412	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	1042	0.15669267183562008	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1006	0.1512791054382282	No Hit
GAGTACATGGAAGCAGTGGTATCAA	962	0.14466252428586038	No Hit
CATGTACTCTGCGTTGATACCACTG	878	0.13203086935861266	No Hit
TTGTAGAACAGTGTATATCAATGAG	779	0.11714356176578507	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	749	0.11263225643462517	No Hit
GTGTATATCAATGAGTTACAATGAA	712	0.1070683131928613	No Hit
GATATACACTGTTCTACAAATCCCG	707	0.10631642897100133	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCCTG	35	0.0021683837	16.28578	6
AGAACCG	35	0.0021683837	16.28578	5
TACTCCG	45	6.7549216E-4	14.777836	5
AGGCCCG	105	8.731149E-11	14.477337	10
CGTCACT	40	0.0052747563	14.250056	15
GATATAT	40	0.005285302	14.245768	1
ATTACCG	90	3.6261554E-8	13.722277	15
AGACGGA	125	7.2759576E-12	13.680054	6
TATACCT	85	2.693505E-7	13.410809	4
TAATACC	50	0.0014987768	13.299052	4
ACAGTCC	65	5.4392844E-5	13.154887	8
TTTCGGA	65	5.4392844E-5	13.154887	17
GTTTTCG	65	5.443128E-5	13.153897	15
TTACCGC	95	7.361268E-8	13.0000515	16
AGCGAAA	105	1.983426E-8	12.66767	17
AAGACGG	120	7.366907E-10	12.666717	5
CGAGCCG	120	7.366907E-10	12.666717	15
TCTAGAC	60	4.094204E-4	12.663857	3
TCCAACG	145	7.2759576E-12	12.450199	18
CGGACCA	115	5.293259E-9	12.392286	9