##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062700_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 664996 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.13870760124873 32.0 32.0 32.0 32.0 32.0 2 31.192437247742845 32.0 32.0 32.0 32.0 32.0 3 31.38305643943723 32.0 32.0 32.0 32.0 32.0 4 31.533585164422043 32.0 32.0 32.0 32.0 32.0 5 31.423172470210346 32.0 32.0 32.0 32.0 32.0 6 35.037968649435484 36.0 36.0 36.0 36.0 36.0 7 35.04649200897449 36.0 36.0 36.0 36.0 36.0 8 34.96504640629417 36.0 36.0 36.0 36.0 36.0 9 35.13387599323906 36.0 36.0 36.0 36.0 36.0 10 34.97967807325157 36.0 36.0 36.0 36.0 36.0 11 35.15143700112482 36.0 36.0 36.0 36.0 36.0 12 35.04331605002135 36.0 36.0 36.0 36.0 36.0 13 35.09321710205776 36.0 36.0 36.0 36.0 36.0 14 35.05415671673213 36.0 36.0 36.0 36.0 36.0 15 35.00451130533116 36.0 36.0 36.0 36.0 36.0 16 35.027270840726864 36.0 36.0 36.0 36.0 36.0 17 34.989814976330685 36.0 36.0 36.0 36.0 36.0 18 35.013103838218576 36.0 36.0 36.0 36.0 36.0 19 34.99457891476039 36.0 36.0 36.0 36.0 36.0 20 34.98532321998929 36.0 36.0 36.0 36.0 36.0 21 34.95752455653869 36.0 36.0 36.0 32.0 36.0 22 34.942789129558676 36.0 36.0 36.0 32.0 36.0 23 34.89227453999723 36.0 36.0 36.0 32.0 36.0 24 34.8685886832402 36.0 36.0 36.0 32.0 36.0 25 34.840221595317864 36.0 36.0 36.0 32.0 36.0 26 34.778830248603 36.0 36.0 36.0 32.0 36.0 27 34.77509037648347 36.0 36.0 36.0 32.0 36.0 28 34.7391277541519 36.0 36.0 36.0 32.0 36.0 29 34.71829153859572 36.0 36.0 36.0 32.0 36.0 30 34.69276657303202 36.0 36.0 36.0 32.0 36.0 31 34.68567931235677 36.0 36.0 36.0 32.0 36.0 32 34.64345199068867 36.0 36.0 36.0 32.0 36.0 33 34.615093925376996 36.0 36.0 36.0 32.0 36.0 34 34.59806976282564 36.0 36.0 36.0 32.0 36.0 35 34.5661116758597 36.0 36.0 36.0 32.0 36.0 36 34.52623775180603 36.0 36.0 36.0 32.0 36.0 37 34.52007982002899 36.0 36.0 36.0 32.0 36.0 38 34.46025540003248 36.0 36.0 36.0 32.0 36.0 39 34.41639047452917 36.0 36.0 36.0 32.0 36.0 40 34.383227869039814 36.0 36.0 36.0 32.0 36.0 41 34.36372248855632 36.0 36.0 36.0 32.0 36.0 42 34.30555371761635 36.0 36.0 36.0 32.0 36.0 43 34.31176428128891 36.0 36.0 36.0 32.0 36.0 44 34.27688737977371 36.0 36.0 36.0 32.0 36.0 45 34.18914850615643 36.0 36.0 36.0 32.0 36.0 46 34.21794867939055 36.0 36.0 36.0 32.0 36.0 47 34.174808570277115 36.0 36.0 36.0 32.0 36.0 48 34.14785652846032 36.0 36.0 36.0 32.0 36.0 49 34.15013924895789 36.0 36.0 36.0 32.0 36.0 50 33.58598247207502 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 3.0 21 15.0 22 46.0 23 152.0 24 459.0 25 1102.0 26 2281.0 27 4403.0 28 7568.0 29 11590.0 30 17118.0 31 24846.0 32 37895.0 33 61401.0 34 130218.0 35 365898.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.64186613125183 17.862852587963694 11.588873598483994 25.906407682300483 2 15.60831681619812 20.19952899847511 38.02765855697886 26.164495628347918 3 19.96153348752019 23.50397146440419 28.352135507989544 28.182359540086075 4 12.393777396822532 15.539816088842773 36.06839149166535 35.99801502266934 5 13.971362233757798 37.24022400134738 33.98967813340231 14.798735631492521 6 34.938262508026405 35.30337913331418 16.398969613213975 13.359388745445441 7 29.993458597433065 30.41466477191558 20.285866811028654 19.306009819622705 8 27.618403145888315 34.67770434364168 19.276987045015375 18.426905465454627 9 26.867078899722706 14.213468953196712 18.229733712683984 40.689718434396596 10 15.050165715282498 27.828588442637248 32.64801592791536 24.4732299141649 11 37.938574066610926 21.00042707023802 21.680581537332554 19.380417325818502 12 23.58540502499263 23.737887145185834 29.99431575528274 22.682392074538793 13 30.12935416152879 19.46553061973305 25.34631787258871 25.058797346149454 14 22.67532436285331 19.771848251718808 25.51504069197409 32.037786693453796 15 25.061804883036892 27.952799716088517 22.652467082508768 24.332928318365823 16 25.091278744533803 26.223616382654935 24.92917250630079 23.755932366510475 17 23.349914886706085 26.482414931819136 26.106021690356034 24.061648491118742 18 24.229920179971007 25.755944396658027 27.15610319460568 22.858032228765286 19 25.037594211093 25.867072884648927 25.19564027452797 23.899692629730104 20 24.774585110286377 25.422107802152194 26.10677357457789 23.696533512983535 21 25.694289890465505 25.245565386859468 24.641952733550276 24.418191989124747 22 24.41909425019098 25.716395286588188 25.57173276230233 24.292777700918503 23 23.98916685213144 25.201354594614102 25.56496580430559 25.244512748948868 24 24.04781382143652 26.32226359256296 25.432483804413863 24.197438781586655 25 24.72706602746483 25.414438583089222 25.466468971241934 24.39202641820402 26 23.2741249571426 26.20060872546602 26.29835367430782 24.22691264308357 27 24.436838717826877 25.72391412880679 26.03895361776612 23.800293535600215 28 23.817737249547367 25.910832546361178 25.684515395581325 24.586914808510127 29 23.401794898014426 25.72692166569423 26.000156391918143 24.871127044373196 30 23.954580177925884 26.206623799240898 25.944968090033626 23.893827932799596 31 24.050219850946473 25.749929322883148 25.425566469572747 24.774284356597633 32 23.747511263225643 26.179706344098307 25.63594367484917 24.436838717826877 33 23.837887746693212 25.388122635324123 26.022712918573948 24.751276699408717 34 23.924805562740225 26.354143483569825 26.172939386101568 23.548111567588375 35 24.57668918309283 25.909328777917462 25.953990700695943 23.559991338293766 36 23.419840119339064 26.580460634349677 25.795493506727862 24.204205739583394 37 24.38525946020728 26.06587107290871 25.69353800624365 23.855331460640365 38 24.122701489933775 25.970532153576865 25.39714524598644 24.50962111050292 39 24.378342125366167 25.470378769195605 25.651883620352606 24.499395485085625 40 24.997293216801303 25.884666975440453 25.494138310606377 23.623901497151863 41 23.462246389451966 25.620755613567603 27.0126436850748 23.904354311905635 42 25.06616581152368 26.22406751318805 25.760455701989184 22.949310973299085 43 23.984204416267165 25.29970105083339 26.142412886694053 24.573681646205394 44 23.416381451918507 26.058051477001364 26.19775156542295 24.327815505657178 45 23.723450968126127 26.179706344098307 25.9960962171201 24.100746470655462 46 23.4980360784125 25.415340844155455 26.0562469548689 25.03037612256314 47 24.084355394618914 25.537597218629887 26.49384357199141 23.88420381475979 48 24.198641796341633 26.239255574469624 25.1627077456105 24.399394883578246 49 23.677435653748294 25.94827638060981 26.366023254275213 24.008264711366685 50 23.467208825316245 26.632791776191134 25.150978351749487 24.749021046743138 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 7.0 1 5.5 2 4.0 3 25.5 4 47.0 5 71.0 6 95.0 7 76.0 8 57.0 9 84.5 10 112.0 11 173.5 12 235.0 13 421.5 14 608.0 15 853.5 16 1099.0 17 1316.0 18 1533.0 19 1763.0 20 1993.0 21 2574.5 22 3156.0 23 3631.0 24 4106.0 25 4883.5 26 5661.0 27 7551.0 28 9441.0 29 10762.5 30 12084.0 31 13317.5 32 14551.0 33 16717.0 34 18883.0 35 21575.0 36 24267.0 37 26586.0 38 28905.0 39 30256.5 40 31608.0 41 33188.0 42 34768.0 43 35966.5 44 37165.0 45 40599.5 46 44034.0 47 47156.5 48 50279.0 49 50843.0 50 51407.0 51 48952.5 52 46498.0 53 44849.0 54 43200.0 55 43034.5 56 42869.0 57 40915.5 58 38962.0 59 35715.5 60 32469.0 61 28673.5 62 24878.0 63 21564.5 64 18251.0 65 15653.0 66 13055.0 67 11348.5 68 9642.0 69 8700.5 70 7759.0 71 5869.0 72 3979.0 73 3542.0 74 3105.0 75 2266.0 76 1427.0 77 1275.5 78 1124.0 79 929.5 80 735.0 81 555.0 82 375.0 83 308.0 84 241.0 85 217.5 86 194.0 87 139.0 88 84.0 89 55.0 90 26.0 91 17.0 92 8.0 93 6.5 94 5.0 95 4.0 96 3.0 97 2.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.013684292837851657 2 0.004511305331159887 3 3.0075368874399246E-4 4 1.5037684437199623E-4 5 0.0 6 4.511305331159887E-4 7 1.5037684437199623E-4 8 1.5037684437199623E-4 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 664996.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.05761946628927 #Duplication Level Percentage of deduplicated Percentage of total 1 82.02245290497213 54.1820798168828 2 11.805108851065055 15.596347764835572 3 3.0406438640387634 6.0257308590953995 4 1.1022486542614154 2.9124768864172 5 0.56469216060497 1.86511099304199 6 0.3153634605611569 1.2499295682792613 7 0.20821336586480055 0.9627855503064578 8 0.14869793571243037 0.7858105322171575 9 0.1041343938350366 0.6190983145176792 >10 0.5826046647013716 7.309642328127451 >50 0.06172091266019198 2.8662243417623348 >100 0.04297585680773016 5.151968255615245 >500 0.0011429749150276192 0.4727947889015117 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 711 0.10691793634848931 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 1.5037684437199623E-4 7 0.0 0.0 0.0 0.0 1.5037684437199623E-4 8 0.0 0.0 0.0 0.0 1.5037684437199623E-4 9 0.0 0.0 0.0 0.0 1.5037684437199623E-4 10 0.0 0.0 0.0 0.0 1.5037684437199623E-4 11 0.0 0.0 0.0 0.0 1.5037684437199623E-4 12 0.0 0.0 0.0 0.0 9.022610662319774E-4 13 0.0 0.0 0.0 0.0 9.022610662319774E-4 14 0.0 0.0 0.0 1.5037684437199623E-4 9.022610662319774E-4 15 0.0 0.0 0.0 3.0075368874399246E-4 9.022610662319774E-4 16 0.0 0.0 0.0 3.0075368874399246E-4 0.0010526379106039737 17 0.0 0.0 0.0 4.511305331159887E-4 0.0010526379106039737 18 0.0 0.0 0.0 7.518842218599811E-4 0.0010526379106039737 19 0.0 0.0 0.0 7.518842218599811E-4 0.0010526379106039737 20 0.0 0.0 0.0 0.001353391599347966 0.001353391599347966 21 0.0 0.0 0.0 0.0016541452880919584 0.0015037684437199622 22 0.0 0.0 0.0 0.002706783198695932 0.0015037684437199622 23 0.0 0.0 0.0 0.004060174798043898 0.0015037684437199622 24 0.0 0.0 0.0 0.007518842218599811 0.0016541452880919584 25 0.0 0.0 0.0 0.010225625417295743 0.0016541452880919584 26 0.0 0.0 0.0 0.01473693074845563 0.0018045221324639548 27 0.0 0.0 0.0 0.01789484448026755 0.0018045221324639548 28 0.0 0.0 0.0 0.024511425632635385 0.0018045221324639548 29 0.0 0.0 0.0 0.0357896889605351 0.0018045221324639548 30 0.0 0.0 0.0 0.057594331394474556 0.0018045221324639548 31 0.0 0.0 0.0 0.09293288982189367 0.0019548989768359507 32 0.0 0.0 0.0 0.13819631997786452 0.0019548989768359507 33 0.0 0.0 0.0 0.18436201120006737 0.0019548989768359507 34 0.0 0.0 0.0 0.24045257415082197 0.0021052758212079473 35 0.0 0.0 0.0 0.3019567034989684 0.0021052758212079473 36 0.0 0.0 0.0 0.39639336176458206 0.0021052758212079473 37 0.0 0.0 0.0 0.5209053889045949 0.0021052758212079473 38 0.0 0.0 0.0 0.6729363785646831 0.0021052758212079473 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGCCG 35 3.2164465E-4 31.428356 5 ATACGAA 170 0.0 28.470394 40 TTATACG 40 7.0290646E-4 27.499811 39 CGCAATA 185 0.0 26.161983 36 CAATACG 185 0.0 26.161983 38 AATACGA 185 0.0 26.161983 39 CGAATGC 180 0.0 25.66649 43 TACGAAT 190 0.0 25.47351 41 TAGCGGC 205 0.0 24.682756 30 CTAGCGG 205 0.0 23.609592 29 CGGTCCA 215 0.0 23.534723 10 TCTAGCG 215 0.0 22.511475 28 CCGGTCC 225 0.0 21.510963 9 CAACGAA 260 0.0 21.153702 30 GCGAAAG 170 0.0 20.70574 18 TCTTGCG 235 0.0 20.5987 2 TGTAGGA 300 0.0 20.536282 2 GTCCTAC 280 0.0 20.431503 1 GGTCTAC 130 1.6170816E-9 20.310608 1 CGAAAGC 175 0.0 20.11415 19 >>END_MODULE