##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062698_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 901234 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.227089745837375 32.0 32.0 32.0 32.0 32.0 2 31.366688340652928 32.0 32.0 32.0 32.0 32.0 3 31.45603361613077 32.0 32.0 32.0 32.0 32.0 4 31.56851272810391 32.0 32.0 32.0 32.0 32.0 5 31.49113548756483 32.0 32.0 32.0 32.0 32.0 6 35.085202067387605 36.0 36.0 36.0 36.0 36.0 7 35.081693544628806 36.0 36.0 36.0 36.0 36.0 8 35.02909899093909 36.0 36.0 36.0 36.0 36.0 9 35.160380101061435 36.0 36.0 36.0 36.0 36.0 10 35.03270071923607 36.0 36.0 36.0 36.0 36.0 11 35.18159878566499 36.0 36.0 36.0 36.0 36.0 12 35.07764243248701 36.0 36.0 36.0 36.0 36.0 13 35.12275391296822 36.0 36.0 36.0 36.0 36.0 14 35.088132493891706 36.0 36.0 36.0 36.0 36.0 15 35.05189218338412 36.0 36.0 36.0 36.0 36.0 16 35.05693526875373 36.0 36.0 36.0 36.0 36.0 17 35.029530621348066 36.0 36.0 36.0 36.0 36.0 18 35.04729182432087 36.0 36.0 36.0 36.0 36.0 19 35.02392386439038 36.0 36.0 36.0 36.0 36.0 20 35.019923793376634 36.0 36.0 36.0 36.0 36.0 21 35.00728556623474 36.0 36.0 36.0 36.0 36.0 22 34.98597811445196 36.0 36.0 36.0 36.0 36.0 23 34.959008426224486 36.0 36.0 36.0 32.0 36.0 24 34.93313501266042 36.0 36.0 36.0 32.0 36.0 25 34.90281658259675 36.0 36.0 36.0 32.0 36.0 26 34.86680928593462 36.0 36.0 36.0 32.0 36.0 27 34.84366213436244 36.0 36.0 36.0 32.0 36.0 28 34.83372242946893 36.0 36.0 36.0 32.0 36.0 29 34.802964601868105 36.0 36.0 36.0 32.0 36.0 30 34.786101056995186 36.0 36.0 36.0 32.0 36.0 31 34.79281629410342 36.0 36.0 36.0 32.0 36.0 32 34.743276440968714 36.0 36.0 36.0 32.0 36.0 33 34.73035526844305 36.0 36.0 36.0 32.0 36.0 34 34.716121451254615 36.0 36.0 36.0 32.0 36.0 35 34.676037521886656 36.0 36.0 36.0 32.0 36.0 36 34.65085649232053 36.0 36.0 36.0 32.0 36.0 37 34.64479258438985 36.0 36.0 36.0 32.0 36.0 38 34.59339749720938 36.0 36.0 36.0 32.0 36.0 39 34.5891677411194 36.0 36.0 36.0 32.0 36.0 40 34.5708284418919 36.0 36.0 36.0 32.0 36.0 41 34.544494548585604 36.0 36.0 36.0 32.0 36.0 42 34.5031534540419 36.0 36.0 36.0 32.0 36.0 43 34.50081000051041 36.0 36.0 36.0 32.0 36.0 44 34.468244651222655 36.0 36.0 36.0 32.0 36.0 45 34.41707370116973 36.0 36.0 36.0 32.0 36.0 46 34.41449057625434 36.0 36.0 36.0 32.0 36.0 47 34.3772383199036 36.0 36.0 36.0 32.0 36.0 48 34.333357374444375 36.0 36.0 36.0 32.0 36.0 49 34.331375647168215 36.0 36.0 36.0 32.0 36.0 50 33.79700943373197 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 5.0 21 20.0 22 73.0 23 222.0 24 646.0 25 1405.0 26 3004.0 27 5769.0 28 9738.0 29 15105.0 30 21523.0 31 30713.0 32 45275.0 33 73140.0 34 158930.0 35 535665.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.69177262038328 18.307159796737547 11.53455605975357 26.466511523125597 2 16.401648476025194 21.055796963146754 35.99161558639852 26.550938974429535 3 18.846153419386194 24.280177402191896 28.65043179924303 28.22323737917888 4 12.456934000419425 15.80456996137514 36.109640903073895 35.62885513513154 5 14.320919983045469 36.68037379859171 33.492966310636305 15.505739907726518 6 34.04546881882931 35.68688674293995 16.672713937461232 13.5949305007695 7 29.696094128821294 30.637138231733633 21.10530795033027 18.561459689114802 8 28.078390295971968 32.589205467170565 19.90748240745467 19.4249218294028 9 27.434162492759928 14.03431295312871 18.789459785139044 39.74206476897232 10 15.762055137733375 26.786605920327016 31.83590499248808 25.61543394945153 11 37.54030584731601 21.229891459931604 22.12854819059201 19.101254502160373 12 24.387229065925165 24.000315123486242 28.91324561656573 22.69921019402286 13 29.594755635051495 19.41826429096106 25.43279547819989 25.554184595787554 14 23.374728427911066 19.86320977681712 25.179254222543758 31.58280757272806 15 25.13276241242563 27.222452770312707 22.620207404514257 25.024577412747412 16 25.602784626412227 25.791082005339344 24.135130276931406 24.471003091317016 17 23.89978629301602 25.93166702543402 25.53898321634559 24.629563465204377 18 24.787790962169648 24.771258075039334 26.639030484868524 23.801920477922494 19 25.2691309915072 25.283888535053052 25.604338052048636 23.842642421391112 20 25.40017353983538 24.487092142551216 25.48916263700659 24.623571680606812 21 26.44152351109701 24.453138696498357 24.724766264921207 24.380571527483426 22 25.335817334898596 24.836280033820294 25.204663827596384 24.623238803684725 23 24.12991520515205 24.52437435782494 25.761566918247645 25.58414351877537 24 24.37835234800285 25.365665298912383 25.561285970125407 24.694696382959364 25 24.696027890647713 24.628675793412143 25.65648876984224 25.018807546097904 26 24.080538461709168 25.500702370305607 26.151143876063266 24.267615291921967 27 25.086159643333474 25.01758699738359 25.375651606574984 24.520601752707954 28 24.133354933346947 24.90207870541946 26.095664389048796 24.868901972184805 29 24.043034328487384 25.217202191661652 25.934662917732798 24.805100562118163 30 24.19882072802402 25.270684417143606 26.17488909650546 24.355605758326917 31 24.373692071093632 25.10113910482738 25.322058422119003 25.20311040195998 32 24.31754683023499 25.23140494033736 25.36433379122403 25.086714438203618 33 23.95748495951107 24.742297782817783 25.904260158848867 25.39595709882228 34 24.502848316863325 25.11378842786668 26.133945235088778 24.249418020181217 35 25.289658401702553 24.934922561732026 25.734381969610553 24.041037066954864 36 24.053797348968192 25.470077693473613 25.662480554439803 24.81364440311839 37 25.107574725321058 25.151514479036518 25.30485978114452 24.4360510144979 38 24.20814128184245 24.88532390034109 25.801955984794184 25.104578833022277 39 24.633668947243446 24.80964988005335 25.472962626798367 25.083718545904837 40 24.947239007849237 25.00183082307148 25.935661548499056 24.115268620580228 41 23.804916370221274 25.124440489373455 26.492453680176293 24.578189460228973 42 25.096589786892192 25.477511944733557 25.83180394880797 23.594094319566285 43 24.12325766671031 24.35948932241793 26.215056245103934 25.302196765767825 44 23.70161356540033 25.106132258658683 25.9818204816951 25.210433694245886 45 23.888357518691038 25.346136519483288 26.08323698395755 24.682268977868123 46 23.589323083683038 24.919832141264088 26.11430549668566 25.376539278367215 47 23.979343877394772 24.71422516238846 26.51542218780028 24.791008772416486 48 24.353053701924253 25.6456147903874 25.56361610858001 24.437715399108335 49 23.444743540523326 25.368883109159217 26.1585781273232 25.027795222994246 50 23.373396920222717 25.761899795169736 25.743036769584815 25.121666515022735 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 34.0 1 35.0 2 36.0 3 120.5 4 205.0 5 227.0 6 249.0 7 219.0 8 189.0 9 257.5 10 326.0 11 492.0 12 658.0 13 1045.5 14 1433.0 15 1866.5 16 2300.0 17 2737.5 18 3175.0 19 3464.5 20 3754.0 21 4360.0 22 4966.0 23 5356.0 24 5746.0 25 6710.5 26 7675.0 27 9344.0 28 11013.0 29 12471.0 30 13929.0 31 15092.5 32 16256.0 33 18618.0 34 20980.0 35 24111.0 36 27242.0 37 31769.0 38 36296.0 39 38798.0 40 41300.0 41 44146.0 42 46992.0 43 48230.5 44 49469.0 45 54027.0 46 58585.0 47 61900.0 48 65215.0 49 66403.5 50 67592.0 51 64081.5 52 60571.0 53 59343.0 54 58115.0 55 59113.5 56 60112.0 57 58624.5 58 57137.0 59 52078.0 60 47019.0 61 41797.0 62 36575.0 63 32051.5 64 27528.0 65 23698.5 66 19869.0 67 17514.0 68 15159.0 69 13888.0 70 12617.0 71 9782.5 72 6948.0 73 6275.0 74 5602.0 75 4108.0 76 2614.0 77 2356.5 78 2099.0 79 1805.0 80 1511.0 81 1195.0 82 879.0 83 747.5 84 616.0 85 495.5 86 375.0 87 278.0 88 181.0 89 121.5 90 62.0 91 41.0 92 20.0 93 12.5 94 5.0 95 4.0 96 3.0 97 2.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014757543545849358 2 0.004216441013099817 3 5.547948701447127E-4 4 1.1095897402894255E-4 5 0.0 6 1.1095897402894255E-4 7 1.1095897402894255E-4 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 901234.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.66218238088275 #Duplication Level Percentage of deduplicated Percentage of total 1 84.71075871360799 53.92871770848665 2 10.279375046768482 13.088148979777406 3 2.3309020941871714 4.451709426963757 4 0.8737535722873365 2.2250023709961693 5 0.44897877088618576 1.4291484198650464 6 0.2501371476763829 0.9554566029364614 7 0.1581330902694728 0.7046968343231442 8 0.12762764986794503 0.650004377818925 9 0.09101601870621712 0.5214850544211327 >10 0.5682100223607994 7.093712461952572 >50 0.08020683157592885 3.5887362574456856 >100 0.07652327984888674 9.419542488895864 >500 0.0042026514789669026 1.8281466145860064 >1k 1.751104782902876E-4 0.11549240153125816 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1036 0.11495349709398446 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 962 0.10674253301584272 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 914 0.10141650226245348 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1095897402894253E-4 2 0.0 0.0 0.0 0.0 1.1095897402894253E-4 3 0.0 0.0 0.0 0.0 1.1095897402894253E-4 4 0.0 0.0 0.0 0.0 1.1095897402894253E-4 5 0.0 0.0 0.0 0.0 1.1095897402894253E-4 6 0.0 0.0 0.0 0.0 2.2191794805788507E-4 7 0.0 0.0 0.0 0.0 2.2191794805788507E-4 8 0.0 0.0 0.0 0.0 2.2191794805788507E-4 9 0.0 0.0 0.0 0.0 2.2191794805788507E-4 10 0.0 0.0 0.0 0.0 3.328769220868276E-4 11 0.0 0.0 0.0 0.0 3.328769220868276E-4 12 0.0 0.0 0.0 0.0 4.4383589611577014E-4 13 0.0 0.0 0.0 0.0 5.547948701447127E-4 14 0.0 0.0 0.0 0.0 5.547948701447127E-4 15 0.0 0.0 0.0 1.1095897402894253E-4 7.767128182025977E-4 16 0.0 0.0 0.0 2.2191794805788507E-4 7.767128182025977E-4 17 0.0 0.0 0.0 2.2191794805788507E-4 7.767128182025977E-4 18 0.0 0.0 0.0 2.2191794805788507E-4 7.767128182025977E-4 19 0.0 0.0 0.0 3.328769220868276E-4 7.767128182025977E-4 20 0.0 0.0 0.0 7.767128182025977E-4 9.98630766260483E-4 21 0.0 0.0 0.0 9.98630766260483E-4 9.98630766260483E-4 22 0.0 0.0 0.0 0.0015534256364051955 9.98630766260483E-4 23 0.0 0.0 0.0 0.002441097428636736 9.98630766260483E-4 24 0.0 0.0 0.0 0.0055479487014471265 9.98630766260483E-4 25 0.0 0.0 0.0 0.007212333311881265 9.98630766260483E-4 26 0.0 0.0 0.0 0.008876717922315404 0.001220548714318368 27 0.0 0.0 0.0 0.012871240987357334 0.0013315076883473104 28 0.0 0.0 0.0 0.021969876857730622 0.0013315076883473104 29 0.0 0.0 0.0 0.04271920500114288 0.0013315076883473104 30 0.0 0.0 0.0 0.08333018949573584 0.0013315076883473104 31 0.0 0.0 0.0 0.15667407132886688 0.0013315076883473104 32 0.0 0.0 0.0 0.24965769156512072 0.0013315076883473104 33 0.0 0.0 0.0 0.34619199897030073 0.0013315076883473104 34 0.0 0.0 0.0 0.4656948139994718 0.0015534256364051955 35 0.0 0.0 0.0 0.5944072238730452 0.0015534256364051955 36 0.0 0.0 0.0 0.7698333618128034 0.0015534256364051955 37 0.0 0.0 0.0 1.0304759918067894 0.0015534256364051955 38 0.0 0.0 0.0 1.3660159292703116 0.0015534256364051955 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 200 0.0 25.29984 4 AGGACGT 215 0.0 22.511486 5 AAATTCG 70 3.214339E-5 21.999863 21 TAGGACA 155 1.8189894E-12 21.29019 4 GTAGTAA 95 6.848113E-7 20.846601 1 TACGACG 340 0.0 19.411642 5 TTAGGAC 185 1.8189894E-12 19.026907 3 CGACGGT 340 0.0 18.764587 7 ACGACGG 345 0.0 18.492636 6 GGACGTG 275 0.0 18.399883 6 AATTCGT 60 0.0074109444 18.33322 22 GGACCGA 60 0.0074109444 18.33322 6 ACGGTAT 375 0.0 18.186552 9 GTAGGAC 385 0.0 17.714174 3 CTACGAC 375 0.0 17.599888 4 GACGGTA 365 0.0 17.479342 8 CTTTCGT 365 0.0 17.479342 38 TGTAGGA 330 0.0 17.334185 2 TTCGTTC 370 0.0 17.243135 40 CGACTTT 400 0.0 17.049892 35 >>END_MODULE