##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062697_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1724856 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.980287050049395 32.0 32.0 32.0 32.0 32.0 2 30.60396404105618 32.0 32.0 32.0 32.0 32.0 3 30.61484147082423 32.0 32.0 32.0 32.0 32.0 4 30.662993316543528 32.0 32.0 32.0 32.0 32.0 5 30.4581101262946 32.0 32.0 32.0 32.0 32.0 6 34.07935908852681 36.0 36.0 36.0 32.0 36.0 7 33.909593612452284 36.0 36.0 36.0 32.0 36.0 8 33.89721460806003 36.0 36.0 36.0 32.0 36.0 9 34.06300757860366 36.0 36.0 36.0 32.0 36.0 10 33.71333375075948 36.0 36.0 36.0 27.0 36.0 11 34.103401675270284 36.0 36.0 36.0 32.0 36.0 12 33.83970661898732 36.0 36.0 36.0 32.0 36.0 13 33.96923337368453 36.0 36.0 36.0 32.0 36.0 14 33.86981985742578 36.0 36.0 36.0 32.0 36.0 15 33.817660140904515 36.0 36.0 36.0 32.0 36.0 16 33.80459876070814 36.0 36.0 36.0 32.0 36.0 17 33.71184377130613 36.0 36.0 36.0 27.0 36.0 18 33.74743630772656 36.0 36.0 36.0 32.0 36.0 19 33.70938269629465 36.0 36.0 36.0 27.0 36.0 20 33.67714696183334 36.0 36.0 36.0 27.0 36.0 21 33.62013002824584 36.0 36.0 36.0 27.0 36.0 22 33.58318259611237 36.0 36.0 36.0 27.0 36.0 23 33.522452309062324 36.0 36.0 36.0 27.0 36.0 24 33.49683973618667 36.0 36.0 36.0 27.0 36.0 25 32.97068392955702 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 11.0 4 70.0 5 137.0 6 288.0 7 84.0 8 259.0 9 297.0 10 179.0 11 67.0 12 125.0 13 115.0 14 559.0 15 616.0 16 869.0 17 1264.0 18 1791.0 19 2511.0 20 3815.0 21 5518.0 22 8003.0 23 11085.0 24 15094.0 25 19924.0 26 25967.0 27 32269.0 28 41976.0 29 54078.0 30 67908.0 31 90826.0 32 128097.0 33 177419.0 34 376681.0 35 656954.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.726635473378444 17.673954763934066 12.12728948878955 24.472120273897943 2 14.799717070286004 20.767214939616537 39.95141493845699 24.48165305164047 3 19.90165765011529 25.26184331898763 28.27612157067146 26.560377460225617 4 11.94753175184852 16.26992318325618 36.64711844436817 35.13542662052714 5 13.452351747492127 37.959636275272274 33.85685892762796 14.73115304960763 6 32.65286472547022 35.9188820323226 17.88160136236795 13.546651879839239 7 28.609659483818866 31.31889105988388 20.99787902555844 19.073570430738815 8 26.96222840514453 34.84874244582609 20.070964990411312 18.11806415861807 9 26.926165912854955 15.45522915527825 18.815349208062475 38.80325572380432 10 15.443918629090442 28.232202072523823 32.06549467822364 24.258384620162094 11 36.505758494955444 22.024313258410793 22.170234600190614 19.299693646443153 12 23.958588517218598 24.29191914149078 30.15335995179419 21.59613238949643 13 29.929748533066018 20.52453809500868 25.5504521389752 23.995261232950103 14 23.099114954865428 20.767360310947055 25.777237036181376 30.356287698006142 15 24.6956386480877 28.075883715855117 24.001597258658393 23.22688037739879 16 24.36722048296124 26.700945004915976 26.04550092457489 22.886333587547895 17 22.508072740866034 26.70520143977181 27.033973715631713 23.75275210373044 18 23.546819934136472 25.892910528121448 28.704155741173643 21.856113796568433 19 24.347056784914635 26.586780740765683 25.94403999017777 23.122122484141915 20 24.10095578410169 25.501661854659986 27.561479335072388 22.83590302616594 21 25.52320005944268 25.644987890876248 24.798161920927306 24.03365012875377 22 23.625362663419896 26.369847305418777 26.23096543223209 23.773824598929238 23 23.065856916691775 26.081345387856185 26.023348526304975 24.829449169147065 24 23.11331707883432 27.23911529083943 26.243701381632416 23.403866248693834 25 24.18414438052558 25.912856205773593 26.00712846917866 23.895870944522166 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 511.0 1 511.0 2 941.0 3 1371.0 4 1371.0 5 1371.0 6 3322.5 7 5274.0 8 5274.0 9 5274.0 10 5489.0 11 5704.0 12 5704.0 13 5704.0 14 6097.5 15 6491.0 16 6491.0 17 6491.0 18 10488.5 19 14486.0 20 14486.0 21 14486.0 22 23807.5 23 33129.0 24 33129.0 25 33129.0 26 49919.5 27 66710.0 28 66710.0 29 66710.0 30 86991.5 31 107273.0 32 107273.0 33 107273.0 34 118809.0 35 130345.0 36 130345.0 37 130345.0 38 140317.5 39 150290.0 40 150290.0 41 150290.0 42 169476.5 43 188663.0 44 188663.0 45 188663.0 46 222925.0 47 257187.0 48 257187.0 49 257187.0 50 238259.5 51 219332.0 52 219332.0 53 219332.0 54 192623.0 55 165914.0 56 165914.0 57 165914.0 58 150322.0 59 134730.0 60 134730.0 61 134730.0 62 118028.0 63 101326.0 64 101326.0 65 101326.0 66 83077.5 67 64829.0 68 64829.0 69 64829.0 70 48750.0 71 32671.0 72 32671.0 73 32671.0 74 25602.5 75 18534.0 76 18534.0 77 18534.0 78 15012.5 79 11491.0 80 11491.0 81 11491.0 82 8050.5 83 4610.0 84 4610.0 85 4610.0 86 3370.5 87 2131.0 88 2131.0 89 2131.0 90 1450.0 91 769.0 92 769.0 93 769.0 94 474.5 95 180.0 96 180.0 97 180.0 98 542.5 99 905.0 100 905.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007304957631245739 2 0.0026668892939468573 3 0.0037684305240553414 4 0.013450398178166758 5 0.03391587471649807 6 0.04632270751877258 7 0.06493295672218434 8 0.08528248155208319 9 0.09357302870500493 10 0.11763300820474289 11 0.1165314669746344 12 0.12998186515280116 13 0.11856062187220266 14 0.12285083508420414 15 0.11038602642771339 16 0.11027007471928092 17 0.12076370433241963 18 0.12772080683836795 19 0.12946008246485502 20 0.1207057284782034 21 0.12685116902512442 22 0.1466209353128609 23 0.13618528155393841 24 0.13079352711182846 25 0.12673521731669193 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1724856.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.19438941440871 #Duplication Level Percentage of deduplicated Percentage of total 1 73.86287896062666 34.859134729371505 2 14.836518870595611 14.00400898266225 3 5.139045865190312 7.276023953408954 4 2.255012737133463 4.2569579700291325 5 1.1618990692669506 2.7417558567611753 6 0.6650701437123655 1.8832547610154884 7 0.43001151248150177 1.4205891540911608 8 0.2766279044624879 1.0444228036875602 9 0.211812127232602 0.8996709613778732 >10 0.9535769673738013 8.1775654291842 >50 0.0934643909517237 3.1021565955293666 >100 0.09492489293830994 9.410539592589416 >500 0.011665852649061987 3.7360611577654317 >1k 0.007122310038374687 5.739414275713426 >5k 2.455968978749892E-4 0.8408542695066957 >10k+ 1.227984489374946E-4 0.6075895073063752 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 10484 0.6078188556030184 No Hit TCCATGTACTCTGCGTTGATACCAC 8548 0.4955776018403855 No Hit GTATCAACGCAGAGTACTTTTTTTT 5961 0.34559406698298295 No Hit GAGTACATGGAAGCAGTGGTATCAA 4557 0.26419596766338754 No Hit CATGTACTCTGCGTTGATACCACTG 3892 0.2256420246095906 No Hit TATCAACGCAGAGTACTTTTTTTTT 3716 0.2154382742675331 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 3383 0.19613231481352644 No Hit GCTTCCATGTACTCTGCGTTGATAC 3006 0.1742754177740055 No Hit CCCATGTACTCTGCGTTGATACCAC 2686 0.15572314442480995 No Hit CATGGAAGCAGTGGTATCAACGCAG 2582 0.14969365558632142 No Hit GTACATGGGAAGCAGTGGTATCAAC 2531 0.14673688702129337 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 2451 0.1420988186839945 No Hit GGTATCAACGCAGAGTACTTTTTTT 2407 0.13954788109848013 No Hit GATATACACTGTTCTACAAATCCCG 2356 0.13659111253345205 No Hit GCGTTGATACCACTGCTTCCATGTA 2292 0.13288065786361294 No Hit GTATCAACGCAGAGTACATGGAAGC 2166 0.12557570023236722 No Hit GTACATGGGGTGGTATCAACGCAAA 2141 0.12412630387696132 No Hit TTGTAGAACAGTGTATATCAATGAG 2096 0.1215173904372307 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 2083 0.12076370433241963 No Hit GTGTATATCAATGAGTTACAATGAG 1956 0.11340077084695767 No Hit GTTCTACAGTGTGGTTTTTATCATT 1739 0.10082001048203444 No Hit GTGTATATCAATGAGTTACAATGAA 1725 0.10000834852300713 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.797585421623602E-5 2 0.0 0.0 0.0 0.0 5.797585421623602E-5 3 0.0 0.0 0.0 0.0 5.797585421623602E-5 4 0.0 5.797585421623602E-5 0.0 0.0 5.797585421623602E-5 5 0.0 5.797585421623602E-5 0.0 0.0 5.797585421623602E-5 6 0.0 5.797585421623602E-5 0.0 0.0 1.1595170843247204E-4 7 0.0 5.797585421623602E-5 0.0 0.0 1.1595170843247204E-4 8 0.0 5.797585421623602E-5 0.0 0.0 1.1595170843247204E-4 9 0.0 5.797585421623602E-5 0.0 0.0 1.1595170843247204E-4 10 0.0 5.797585421623602E-5 0.0 5.797585421623602E-5 1.1595170843247204E-4 11 0.0 5.797585421623602E-5 0.0 2.3190341686494409E-4 1.1595170843247204E-4 12 0.0 5.797585421623602E-5 0.0 2.898792710811801E-4 4.0583097951365214E-4 13 0.0 5.797585421623602E-5 0.0 3.4785512529741616E-4 4.0583097951365214E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGTTG 40 0.0052751843 14.251719 12 GGTTCGT 50 0.001497315 13.302766 18 CCAACGA 340 0.0 13.13432 19 AACCGCG 190 0.0 13.000814 7 TCCAACG 445 0.0 12.811651 18 AGGATCG 60 4.0932707E-4 12.666356 5 CGTCTTA 85 3.934858E-6 12.296674 15 CGCCAGT 170 0.0 12.296674 18 TCGAACG 85 3.961768E-6 12.289179 3 GCGTGGG 55 0.0030685721 12.090964 11 GAACGTC 95 1.0402855E-6 11.999707 5 GTCCTAC 940 0.0 11.916938 1 CGCGGTC 200 0.0 11.875745 10 ATTAGCT 145 9.822543E-11 11.788366 3 CGAACGA 105 2.7130045E-7 11.76435 16 CGACTTT 130 2.6084308E-9 11.694399 13 ACGCGCG 130 2.6084308E-9 11.694399 13 CAAGACG 325 0.0 11.691004 4 AGAACCG 220 0.0 11.658805 5 ATTACCG 310 0.0 11.647582 15 >>END_MODULE