##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062697_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1724856 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.096299633128794 32.0 32.0 32.0 32.0 32.0 2 31.303206180689866 32.0 32.0 32.0 32.0 32.0 3 31.438714304266558 32.0 32.0 32.0 32.0 32.0 4 31.57227559865867 32.0 32.0 32.0 32.0 32.0 5 31.492228336742315 32.0 32.0 32.0 32.0 32.0 6 35.06243071885421 36.0 36.0 36.0 36.0 36.0 7 35.073169006572144 36.0 36.0 36.0 36.0 36.0 8 35.0162848376908 36.0 36.0 36.0 36.0 36.0 9 35.139616292606455 36.0 36.0 36.0 36.0 36.0 10 35.02887719322656 36.0 36.0 36.0 36.0 36.0 11 35.16186452666194 36.0 36.0 36.0 36.0 36.0 12 35.06445291664927 36.0 36.0 36.0 36.0 36.0 13 35.106517297675865 36.0 36.0 36.0 36.0 36.0 14 35.06114191561498 36.0 36.0 36.0 36.0 36.0 15 35.0268109337823 36.0 36.0 36.0 36.0 36.0 16 35.03950474706294 36.0 36.0 36.0 36.0 36.0 17 35.01088438687056 36.0 36.0 36.0 36.0 36.0 18 35.0203124202832 36.0 36.0 36.0 36.0 36.0 19 34.99791750731655 36.0 36.0 36.0 36.0 36.0 20 34.96938585018112 36.0 36.0 36.0 36.0 36.0 21 34.94276681647627 36.0 36.0 36.0 36.0 36.0 22 34.92236801217029 36.0 36.0 36.0 32.0 36.0 23 34.86249170945285 36.0 36.0 36.0 32.0 36.0 24 34.83872740680961 36.0 36.0 36.0 32.0 36.0 25 34.80457846915917 36.0 36.0 36.0 32.0 36.0 26 34.749773314410014 36.0 36.0 36.0 32.0 36.0 27 34.71505389435408 36.0 36.0 36.0 32.0 36.0 28 34.67275355160083 36.0 36.0 36.0 32.0 36.0 29 34.63156344645582 36.0 36.0 36.0 32.0 36.0 30 34.6109083888742 36.0 36.0 36.0 32.0 36.0 31 34.59806615740676 36.0 36.0 36.0 32.0 36.0 32 34.54542118298571 36.0 36.0 36.0 32.0 36.0 33 34.51125543233754 36.0 36.0 36.0 32.0 36.0 34 34.4762142462907 36.0 36.0 36.0 32.0 36.0 35 34.41068819657989 36.0 36.0 36.0 32.0 36.0 36 34.365490220632914 36.0 36.0 36.0 32.0 36.0 37 34.323314525966225 36.0 36.0 36.0 32.0 36.0 38 34.24941908194075 36.0 36.0 36.0 32.0 36.0 39 34.157296609108236 36.0 36.0 36.0 32.0 36.0 40 34.116946574090825 36.0 36.0 36.0 32.0 36.0 41 34.091919557342756 36.0 36.0 36.0 32.0 36.0 42 33.97720853219052 36.0 36.0 36.0 32.0 36.0 43 33.99380759901116 36.0 36.0 36.0 32.0 36.0 44 33.95428951750175 36.0 36.0 36.0 32.0 36.0 45 33.818091481259884 36.0 36.0 36.0 32.0 36.0 46 33.85015502743418 36.0 36.0 36.0 32.0 36.0 47 33.768744753185196 36.0 36.0 36.0 32.0 36.0 48 33.72633773486019 36.0 36.0 36.0 27.0 36.0 49 33.72461179368017 36.0 36.0 36.0 27.0 36.0 50 33.18278917196566 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 9.0 20 27.0 21 95.0 22 270.0 23 774.0 24 1977.0 25 4484.0 26 9243.0 27 16841.0 28 26813.0 29 37486.0 30 51014.0 31 68908.0 32 98578.0 33 144345.0 34 302534.0 35 961456.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.00141016408233 18.338975149337074 12.721396340763366 24.93821834581723 2 14.423983947003311 21.087589366107235 39.441855718996024 25.046570967893427 3 19.462758457556838 25.347508881942062 28.715167945233432 26.47456471526766 4 11.892679425643141 16.646655276310824 36.77106022491218 34.689605073133855 5 13.364253806841733 37.93571053798725 33.81982833339614 14.880207321774874 6 33.011178969021 36.075626461724696 17.426019482319003 13.487175086935297 7 28.546705982071526 31.307403409216082 21.029432056278385 19.116458552434004 8 26.980223276609756 34.89282583589587 19.969667033074064 18.15728385442031 9 26.92781310439828 15.053140667974601 18.71443181343834 39.30461441418878 10 15.472016214686906 28.19226648485439 32.167496880899044 24.16822041955966 11 36.78423010384635 21.693695009902275 22.25461139944436 19.267463486807017 12 23.87300736989059 24.12926064552635 30.330010157369657 21.667721827213402 13 30.169417041190684 20.169451826703213 25.62405209478357 24.03707903732254 14 23.168136934329592 20.549483551090642 25.823141178162118 30.45923833641765 15 24.807056357168367 28.02419448348152 23.976436293812352 23.19231286553776 16 24.53207688062076 26.4511936068866 26.093714489789292 22.923015022703343 17 22.703982245474403 26.592886594591086 27.049388470689728 23.653742689244783 18 23.723371690158483 25.519405677923256 28.836610128613632 21.920612503304625 19 24.554339608639793 26.27216416906687 26.158821374074126 23.01467484821921 20 24.21831155760249 25.16911556674876 27.805335633815233 22.807237241833523 21 25.579294735328627 25.360725764933424 25.128416517088965 23.931562982648984 22 23.810161543920188 25.997010764956613 26.433452995496438 23.759374695626764 23 23.216256893329064 25.573381198198575 26.292339766334116 24.918022142138245 24 23.251274309275676 26.820093967264512 26.399537120779936 23.529094602679876 25 24.397978729818607 25.403743848761867 26.201027795943542 23.99724962547598 26 22.374679393526183 26.550564221013236 27.57030152082261 23.504454864637975 27 24.01388869563604 26.018056000037106 26.974599618750783 22.993455685576073 28 22.985570969402662 26.011098897531156 26.779105038333633 24.224225094732546 29 22.627222214492107 25.698087260617697 27.24847755406828 24.42621297082191 30 23.535298019081015 25.891320782720413 27.308772442453165 23.264608755745407 31 23.493845283316407 25.812705524403196 26.288049553122118 24.405399639158283 32 23.037807214051494 26.559318574999885 26.487892322605482 23.914981888343142 33 22.89083842361333 25.812647548548977 27.07675307387979 24.219760953957895 34 23.058968400840417 26.701011562704362 27.57006961740574 22.669950419049474 35 24.070067298371576 26.195925920772517 27.09060930303747 22.64339747781844 36 22.89217186826031 27.028459187317665 26.67271934584684 23.406649598575186 37 24.021193653267286 26.455309892535954 26.513053843335328 23.01044261086143 38 23.47500313069613 26.38991312898004 26.046232265186198 24.088851475137634 39 23.784826095627693 25.608920396833128 26.771452225577093 23.83480128196209 40 24.835116670609025 26.174184975441428 26.105367636486754 22.88533071746279 41 22.831355197187474 25.910104959486475 27.986046371407237 23.272493471918814 42 24.859466529379844 26.871576525808532 26.48394996451878 21.78500698029285 43 23.449899585820496 25.51818818498472 26.829022248813818 24.20288998038097 44 22.952118901519896 26.484123892081424 26.981788624673598 23.581968581725082 45 23.307568863719638 26.593350401424814 26.5461580560928 23.55292267876275 46 22.961537614198072 25.777602046318123 26.76533781989664 24.495522519587166 47 23.805581451437106 25.77218040230605 27.226562681174542 23.195675465082303 48 23.670613662821708 27.160991990055983 25.427687876553172 23.740706470569137 49 23.052707008585063 26.46070164697807 27.11032109347099 23.376270250965877 50 23.015094022396084 27.753521310486967 25.07526719637303 24.15611747074392 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 53.0 1 52.0 2 51.0 3 191.0 4 331.0 5 353.5 6 376.0 7 371.5 8 367.0 9 489.0 10 611.0 11 968.5 12 1326.0 13 2394.5 14 3463.0 15 4886.0 16 6309.0 17 7192.0 18 8075.0 19 8634.5 20 9194.0 21 10352.5 22 11511.0 23 12469.5 24 13428.0 25 15054.5 26 16681.0 27 22165.5 28 27650.0 29 32449.0 30 37248.0 31 40964.5 32 44681.0 33 50657.5 34 56634.0 35 63894.0 36 71154.0 37 76863.0 38 82572.0 39 84378.0 40 86184.0 41 89220.0 42 92256.0 43 94727.5 44 97199.0 45 108150.5 46 119102.0 47 127634.5 48 136167.0 49 133936.5 50 131706.0 51 120969.5 52 110233.0 53 104504.0 54 98775.0 55 99182.0 56 99589.0 57 95252.5 58 90916.0 59 82611.5 60 74307.0 61 65370.5 62 56434.0 63 48466.0 64 40498.0 65 35179.5 66 29861.0 67 25909.0 68 21957.0 69 20387.5 70 18818.0 71 14423.5 72 10029.0 73 9077.5 74 8126.0 75 5716.0 76 3306.0 77 3001.0 78 2696.0 79 2304.5 80 1913.0 81 1546.0 82 1179.0 83 1025.5 84 872.0 85 729.0 86 586.0 87 429.0 88 272.0 89 177.5 90 83.0 91 58.0 92 33.0 93 27.0 94 21.0 95 15.0 96 9.0 97 9.0 98 9.0 99 7.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01356634988659923 2 0.004000333940920285 3 4.6380683372988817E-4 4 2.898792710811801E-4 5 5.797585421623602E-5 6 5.797585421623602E-4 7 1.1595170843247204E-4 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.1595170843247204E-4 47 0.0 48 0.0 49 0.0 50 5.797585421623602E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1724856.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.76508680773738 #Duplication Level Percentage of deduplicated Percentage of total 1 73.94430209203075 38.27733216731529 2 15.01460420212628 15.544645798137708 3 5.0775349177755 7.885171073638995 4 2.2044591858317935 4.5645608447478745 5 1.1297940026455502 2.924194231090399 6 0.6830078969355664 2.1213577845143847 7 0.4195635150667639 1.5203119245153327 8 0.26796651901030705 1.1097048094508604 9 0.188714953135655 0.8791961337886747 >10 0.9016363486052987 8.282207725586312 >50 0.07748508372552308 2.794919257504642 >100 0.07855248596615605 8.463741960305292 >500 0.008890227040483098 3.085576245575276 >1k 0.0034885701044933683 2.5470800438289793 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 3658 0.21207567472299135 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 3316 0.19224793258103864 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 5.797585421623602E-5 0.0 11 0.0 0.0 0.0 1.7392756264870808E-4 0.0 12 0.0 0.0 0.0 1.7392756264870808E-4 5.797585421623602E-5 13 0.0 0.0 0.0 2.3190341686494409E-4 5.797585421623602E-5 14 0.0 0.0 0.0 2.3190341686494409E-4 5.797585421623602E-5 15 0.0 0.0 0.0 3.4785512529741616E-4 5.797585421623602E-5 16 0.0 0.0 0.0 4.6380683372988817E-4 5.797585421623602E-5 17 0.0 0.0 0.0 6.377343963785962E-4 5.797585421623602E-5 18 0.0 0.0 0.0 6.957102505948323E-4 5.797585421623602E-5 19 0.0 0.0 0.0 9.855895216760123E-4 5.797585421623602E-5 20 0.0 0.0 0.0 0.0016233239180546085 2.3190341686494409E-4 21 0.0 0.0 0.0 0.002261058314433205 2.3190341686494409E-4 22 0.0 0.0 0.0 0.003304623690325453 2.3190341686494409E-4 23 0.0 0.0 0.0 0.006725199089083379 2.3190341686494409E-4 24 0.0 0.0 0.0 0.010957436446868607 2.3190341686494409E-4 25 0.0 0.0 0.0 0.013798253303464174 2.3190341686494409E-4 26 0.0 0.0 0.0 0.0172188287022221 2.3190341686494409E-4 27 0.0 0.0 0.0 0.020755355809412495 2.3190341686494409E-4 28 0.0 0.0 0.0 0.029335782233415427 2.898792710811801E-4 29 0.0 0.0 0.0 0.04017726697185156 2.898792710811801E-4 30 0.0 0.0 0.0 0.06012096082223675 2.898792710811801E-4 31 0.0 5.797585421623602E-5 0.0 0.10006632437722338 2.898792710811801E-4 32 0.0 5.797585421623602E-5 0.0 0.14401202187313028 3.4785512529741616E-4 33 0.0 5.797585421623602E-5 0.0 0.1852908300750903 3.4785512529741616E-4 34 0.0 5.797585421623602E-5 0.0 0.23039604465532196 3.4785512529741616E-4 35 0.0 5.797585421623602E-5 0.0 0.2820525307619883 3.4785512529741616E-4 36 0.0 5.797585421623602E-5 0.0 0.3563775758672028 3.4785512529741616E-4 37 0.0 5.797585421623602E-5 0.0 0.4658939644816727 3.4785512529741616E-4 38 0.0 5.797585421623602E-5 0.0 0.591237761297175 3.4785512529741616E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCAATA 490 0.0 21.99993 36 GATATAC 1315 0.0 21.082224 1 ATACACT 1245 0.0 20.674631 4 AATACGA 525 0.0 20.533266 39 ATACGAA 545 0.0 20.18342 40 CTAGCGG 535 0.0 20.149467 29 TCTAGCG 540 0.0 19.962896 28 TACGAAT 550 0.0 19.599936 41 CGAATGC 555 0.0 19.423359 43 TAGCGGC 560 0.0 19.249935 30 ACTGTTC 1315 0.0 19.07218 8 CGTCGTA 300 0.0 19.066603 10 TGTAGGA 1190 0.0 19.042507 2 CAATACG 570 0.0 18.912218 38 GTAGGAC 1210 0.0 18.545393 3 CGGTCCA 630 0.0 18.15867 10 ATACCGT 340 0.0 18.117588 6 ATCGAGC 85 1.4313177E-4 18.117588 8 CCGTCGT 330 0.0 17.99994 9 GCAATAC 600 0.0 17.966606 37 >>END_MODULE