SRR4062696_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062696_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	645146
Sequences flagged as poor quality	0
Sequence length	25
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGAAGCAGTGGTATCAACG	2030	0.31465745738173995	No Hit
TCCATGTACTCTGCGTTGATACCAC	1567	0.2428907565109293	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1158	0.17949425401382013	No Hit
GAGTACATGGAAGCAGTGGTATCAA	948	0.1469434825605367	No Hit
CATGTACTCTGCGTTGATACCACTG	894	0.13857328418683523	No Hit
GTCTTGCGCCGGTCCAAGAATTTCA	894	0.13857328418683523	No Hit
GCGCAAGACGGACCAGAGCGAAAGC	860	0.13330315928487504	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	816	0.12648299764704424	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTG	800	0.12400293886965122	No Hit
GGGTAGGCACACGCTGAGCCAGTCA	792	0.1227629094809547	No Hit
TATCAACGCAGAGTACTTTTTTTTT	783	0.12136787641867113	No Hit
GAATAGGACCGCGGTTCTATTTTGT	749	0.11609775151671094	No Hit
GAATAACGCCGCCGCATCGCCAGTC	695	0.1077275531430095	No Hit
GTGTAGCGCGCGTGCAGCCCCGGAC	660	0.10230242456746226	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCGCGC	35	0.002166747	16.287512	14
CGCGTAT	35	0.002166747	16.287512	7
ACGCGCG	35	0.002166747	16.287512	13
AAGACGG	110	0.0	15.541136	5
CAAGACG	120	0.0	15.037489	4
ACAATAC	65	3.3798788E-6	14.609056	3
GCCGTTA	40	0.0052653733	14.253786	16
TACGCGT	40	0.005284393	14.246042	5
GCGTTAT	60	2.5816946E-5	14.239411	1
CGCGTAA	55	1.9542301E-4	13.820779	10
CGCAAGA	110	1.8735591E-10	13.810057	2
AGGCCCG	120	5.0931703E-11	13.460863	10
CGCGCTA	50	0.0014948894	13.303534	16
CGCGGTC	50	0.0014957645	13.302501	10
GCACGCG	50	0.0014957645	13.302501	11
ACTGTTC	150	0.0	13.301468	8
CTAGAAC	50	0.0015027816	13.294242	3
ACGATCA	65	5.4371943E-5	13.155296	9
ATTATAC	65	5.4649892E-5	13.148151	3
CGTTATT	65	5.472954E-5	13.1461115	2